Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 PTP4A1P5-201ENST00000420305 455 ntBASIC3.58□□□□□ -1.84
HOXC4P09017 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.58□□□□□ -1.84
HOXC4P09017 USP12PY-201ENST00000427677 1064 ntBASIC3.58□□□□□ -1.84
HOXC4P09017 AL160175.1-201ENST00000428124 247 ntBASIC3.58□□□□□ -1.84
HOXC4P09017 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
HOXC4P09017 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.58□□□□□ -1.84
HOXC4P09017 AL645931.1-201ENST00000439737 410 ntBASIC3.58□□□□□ -1.84
HOXC4P09017 GXYLT1P1-201ENST00000446657 490 ntBASIC3.58□□□□□ -1.84
HOXC4P09017 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.58□□□□□ -1.84
HOXC4P09017 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.58□□□□□ -1.84
HOXC4P09017 AL136097.1-201ENST00000456945 913 ntBASIC3.58□□□□□ -1.84
HOXC4P09017 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC3.58□□□□□ -1.84
HOXC4P09017 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC3.58□□□□□ -1.84
HOXC4P09017 RN7SKP13-201ENST00000515933 244 ntBASIC3.58□□□□□ -1.84
HOXC4P09017 RNU6-1231P-201ENST00000517185 103 ntBASIC3.58□□□□□ -1.84
HOXC4P09017 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.58□□□□□ -1.84
HOXC4P09017 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.58□□□□□ -1.84
HOXC4P09017 AP000619.3-201ENST00000535634 1127 ntBASIC3.58□□□□□ -1.84
HOXC4P09017 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.58□□□□□ -1.84
HOXC4P09017 MIR3944-201ENST00000581277 108 ntBASIC3.58□□□□□ -1.84
HOXC4P09017 AC006116.10-201ENST00000591836 581 ntBASIC3.58□□□□□ -1.84
HOXC4P09017 AC040174.2-201ENST00000602701 465 ntBASIC3.58□□□□□ -1.84
HOXC4P09017 AC024220.1-201ENST00000603675 484 ntBASIC3.58□□□□□ -1.84
HOXC4P09017 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.58□□□□□ -1.84
HOXC4P09017 AL355816.2-201ENST00000610049 647 ntBASIC3.58□□□□□ -1.84
HOXC4P09017 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.58□□□□□ -1.84
HOXC4P09017 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.58□□□□□ -1.84
HOXC4P09017 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.58□□□□□ -1.84
HOXC4P09017 AL512283.1-201ENST00000606756 1384 ntBASIC3.58□□□□□ -1.84
HOXC4P09017 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HOXC4P09017 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.58□□□□□ -1.84
HOXC4P09017 MTCO1P14-201ENST00000441695 1559 ntBASIC3.58□□□□□ -1.84
HOXC4P09017 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
HOXC4P09017 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
HOXC4P09017 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.57□□□□□ -1.84
HOXC4P09017 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
HOXC4P09017 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.57□□□□□ -1.84
HOXC4P09017 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
HOXC4P09017 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HOXC4P09017 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HOXC4P09017 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
HOXC4P09017 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.57□□□□□ -1.84
HOXC4P09017 RNU6-317P-201ENST00000384031 107 ntBASIC3.57□□□□□ -1.84
HOXC4P09017 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.57□□□□□ -1.84
HOXC4P09017 AL445528.1-201ENST00000426330 420 ntBASIC3.57□□□□□ -1.84
HOXC4P09017 YME1L1P1-201ENST00000429435 297 ntBASIC3.57□□□□□ -1.84
HOXC4P09017 UBE2V1P6-201ENST00000430840 422 ntBASIC3.57□□□□□ -1.84
HOXC4P09017 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC3.57□□□□□ -1.84
HOXC4P09017 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.57□□□□□ -1.84
HOXC4P09017 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.57□□□□□ -1.84
HOXC4P09017 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.57□□□□□ -1.84
HOXC4P09017 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.57□□□□□ -1.84
HOXC4P09017 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC3.57□□□□□ -1.84
HOXC4P09017 HMGB1P3-201ENST00000502802 616 ntBASIC3.57□□□□□ -1.84
HOXC4P09017 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.57□□□□□ -1.84
HOXC4P09017 AC008628.1-201ENST00000508663 265 ntBASIC3.57□□□□□ -1.84
HOXC4P09017 AC108157.1-201ENST00000510511 539 ntBASIC3.57□□□□□ -1.84
HOXC4P09017 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC3.57□□□□□ -1.84
HOXC4P09017 IGKV2-23-201ENST00000518729 323 ntBASIC3.57□□□□□ -1.84
HOXC4P09017 AP003049.1-201ENST00000529418 457 ntBASIC3.57□□□□□ -1.84
HOXC4P09017 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.57□□□□□ -1.84
HOXC4P09017 AC103843.2-201ENST00000530523 682 ntBASIC3.57□□□□□ -1.84
HOXC4P09017 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HOXC4P09017 AC008011.1-201ENST00000545989 227 ntBASIC3.57□□□□□ -1.84
HOXC4P09017 CR383656.14-201ENST00000551951 406 ntBASIC3.57□□□□□ -1.84
HOXC4P09017 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.57□□□□□ -1.84
HOXC4P09017 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC3.57□□□□□ -1.84
HOXC4P09017 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
HOXC4P09017 OR4H6P-202ENST00000603819 340 ntBASIC3.57□□□□□ -1.84
HOXC4P09017 BNIP3P19-201ENST00000605397 577 ntBASIC3.57□□□□□ -1.84
HOXC4P09017 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.57□□□□□ -1.84
HOXC4P09017 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
HOXC4P09017 AC009452.1-201ENST00000640823 606 ntBASIC3.57□□□□□ -1.84
HOXC4P09017 MFSD8-233ENST00000641482 4860 ntBASIC3.57□□□□□ -1.84
HOXC4P09017 AL732372.2-225ENST00000642124 456 ntBASIC3.57□□□□□ -1.84
HOXC4P09017 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.57□□□□□ -1.84
HOXC4P09017 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.57□□□□□ -1.84
HOXC4P09017 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
HOXC4P09017 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
HOXC4P09017 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HOXC4P09017 AC090229.1-201ENST00000590983 1609 ntBASIC3.56□□□□□ -1.84
HOXC4P09017 AC007823.1-201ENST00000569932 1566 ntBASIC3.56□□□□□ -1.84
HOXC4P09017 AL136964.1-201ENST00000622038 2990 ntBASIC3.56□□□□□ -1.84
HOXC4P09017 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HOXC4P09017 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HOXC4P09017 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC3.56□□□□□ -1.84
HOXC4P09017 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.56□□□□□ -1.84
HOXC4P09017 MIR183-201ENST00000384958 110 ntBASIC3.56□□□□□ -1.84
HOXC4P09017 RNU6-328P-201ENST00000390887 106 ntBASIC3.56□□□□□ -1.84
HOXC4P09017 RPS3AP25-201ENST00000411660 793 ntBASIC3.56□□□□□ -1.84
HOXC4P09017 AC093578.1-201ENST00000415219 368 ntBASIC3.56□□□□□ -1.84
HOXC4P09017 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.56□□□□□ -1.84
HOXC4P09017 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC3.56□□□□□ -1.84
HOXC4P09017 SDCBPP2-201ENST00000424643 885 ntBASIC3.56□□□□□ -1.84
HOXC4P09017 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.56□□□□□ -1.84
HOXC4P09017 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.56□□□□□ -1.84
HOXC4P09017 AC074367.1-201ENST00000438685 1125 ntBASIC3.56□□□□□ -1.84
HOXC4P09017 MED6P1-201ENST00000439659 713 ntBASIC3.56□□□□□ -1.84
HOXC4P09017 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.56□□□□□ -1.84
HOXC4P09017 AL353718.1-201ENST00000451028 517 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms