Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC2.8□□□□□ -1.96
CTSDP07339 AL391497.1-201ENST00000608671 547 ntBASIC2.8□□□□□ -1.96
CTSDP07339 SNORD39.4-201ENST00000620099 78 ntBASIC2.8□□□□□ -1.96
CTSDP07339 PLCE1P1-201ENST00000622094 305 ntBASIC2.8□□□□□ -1.96
CTSDP07339 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC2.8□□□□□ -1.96
CTSDP07339 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
CTSDP07339 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC2.8□□□□□ -1.96
CTSDP07339 PTER-201ENST00000298942 3448 ntTSL 5 BASIC2.8□□□□□ -1.96
CTSDP07339 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CTSDP07339 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CTSDP07339 AC017002.4-201ENST00000604721 1525 ntBASIC2.79□□□□□ -1.96
CTSDP07339 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CTSDP07339 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CTSDP07339 SNORD9-201ENST00000362566 104 ntBASIC2.79□□□□□ -1.96
CTSDP07339 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC2.79□□□□□ -1.96
CTSDP07339 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC2.79□□□□□ -1.96
CTSDP07339 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
CTSDP07339 DYNLT3P1-201ENST00000378574 347 ntBASIC2.79□□□□□ -1.96
CTSDP07339 HSPE1P26-201ENST00000405341 275 ntBASIC2.79□□□□□ -1.96
CTSDP07339 RN7SKP159-201ENST00000410657 292 ntBASIC2.79□□□□□ -1.96
CTSDP07339 CYCSP19-201ENST00000411715 316 ntBASIC2.79□□□□□ -1.96
CTSDP07339 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC2.79□□□□□ -1.96
CTSDP07339 DBIP2-201ENST00000419076 262 ntBASIC2.79□□□□□ -1.96
CTSDP07339 AC048351.1-201ENST00000420064 602 ntBASIC2.79□□□□□ -1.96
CTSDP07339 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC2.79□□□□□ -1.96
CTSDP07339 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC2.79□□□□□ -1.96
CTSDP07339 CST9LP2-201ENST00000437612 320 ntBASIC2.79□□□□□ -1.96
CTSDP07339 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC2.79□□□□□ -1.96
CTSDP07339 AC115115.1-201ENST00000449927 248 ntBASIC2.79□□□□□ -1.96
CTSDP07339 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC2.79□□□□□ -1.96
CTSDP07339 OR6C72P-201ENST00000451403 892 ntBASIC2.79□□□□□ -1.96
CTSDP07339 MTCYBP14-201ENST00000457471 715 ntBASIC2.79□□□□□ -1.96
CTSDP07339 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.79□□□□□ -1.96
CTSDP07339 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC2.79□□□□□ -1.96
CTSDP07339 AC112198.1-201ENST00000505369 1220 ntBASIC2.79□□□□□ -1.96
CTSDP07339 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC2.79□□□□□ -1.96
CTSDP07339 SNORA70.18-201ENST00000516696 98 ntBASIC2.79□□□□□ -1.96
CTSDP07339 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC2.79□□□□□ -1.96
CTSDP07339 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CTSDP07339 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC2.79□□□□□ -1.96
CTSDP07339 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC2.79□□□□□ -1.96
CTSDP07339 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC2.79□□□□□ -1.96
CTSDP07339 AC006116.10-201ENST00000591836 581 ntBASIC2.79□□□□□ -1.96
CTSDP07339 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC2.79□□□□□ -1.96
CTSDP07339 AC005156.1-201ENST00000613371 573 ntBASIC2.79□□□□□ -1.96
CTSDP07339 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
CTSDP07339 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC2.79□□□□□ -1.96
CTSDP07339 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CTSDP07339 AC090337.1-201ENST00000579651 2074 ntBASIC2.78□□□□□ -1.96
CTSDP07339 AC107081.3-201ENST00000612715 2034 ntBASIC2.78□□□□□ -1.96
CTSDP07339 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.78□□□□□ -1.96
CTSDP07339 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.78□□□□□ -1.96
CTSDP07339 Y_RNA.126-201ENST00000363382 111 ntBASIC2.78□□□□□ -1.96
CTSDP07339 U3.6-201ENST00000363622 211 ntBASIC2.78□□□□□ -1.96
CTSDP07339 MIR92A2-201ENST00000385299 75 ntBASIC2.78□□□□□ -1.96
CTSDP07339 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC2.78□□□□□ -1.96
CTSDP07339 RPL21P3-201ENST00000395517 478 ntBASIC2.78□□□□□ -1.96
CTSDP07339 AC025750.1-201ENST00000399891 379 ntBASIC2.78□□□□□ -1.96
CTSDP07339 ATP5A1P2-201ENST00000412323 255 ntBASIC2.78□□□□□ -1.96
CTSDP07339 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC2.78□□□□□ -1.96
CTSDP07339 OR2B8P-201ENST00000432841 938 ntBASIC2.78□□□□□ -1.96
CTSDP07339 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC2.78□□□□□ -1.96
CTSDP07339 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC2.78□□□□□ -1.96
CTSDP07339 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CTSDP07339 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC2.78□□□□□ -1.96
CTSDP07339 PPIAP3-201ENST00000450588 505 ntBASIC2.78□□□□□ -1.96
CTSDP07339 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC2.78□□□□□ -1.96
CTSDP07339 HMGB3P30-201ENST00000457863 606 ntBASIC2.78□□□□□ -1.96
CTSDP07339 AC146507.2-201ENST00000460608 476 ntBASIC2.78□□□□□ -1.96
CTSDP07339 AC021205.1-201ENST00000468797 348 ntBASIC2.78□□□□□ -1.96
CTSDP07339 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
CTSDP07339 ST13P14-201ENST00000474095 734 ntBASIC2.78□□□□□ -1.96
CTSDP07339 AC005912.1-201ENST00000495392 255 ntBASIC2.78□□□□□ -1.96
CTSDP07339 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC2.78□□□□□ -1.96
CTSDP07339 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC2.78□□□□□ -1.96
CTSDP07339 POU5F1P7-201ENST00000508759 541 ntBASIC2.78□□□□□ -1.96
CTSDP07339 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC2.78□□□□□ -1.96
CTSDP07339 RNU4-18P-201ENST00000516751 149 ntBASIC2.78□□□□□ -1.96
CTSDP07339 RNU1-45P-201ENST00000517191 141 ntBASIC2.78□□□□□ -1.96
CTSDP07339 AC007991.1-201ENST00000522680 631 ntBASIC2.78□□□□□ -1.96
CTSDP07339 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC2.78□□□□□ -1.96
CTSDP07339 IGKV2D-19-201ENST00000523346 262 ntBASIC2.78□□□□□ -1.96
CTSDP07339 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CTSDP07339 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC2.78□□□□□ -1.96
CTSDP07339 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC2.78□□□□□ -1.96
CTSDP07339 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC2.78□□□□□ -1.96
CTSDP07339 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC2.78□□□□□ -1.96
CTSDP07339 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CTSDP07339 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC2.78□□□□□ -1.96
CTSDP07339 AC093227.2-201ENST00000589357 285 ntBASIC2.78□□□□□ -1.96
CTSDP07339 AC084373.1-201ENST00000603311 235 ntBASIC2.78□□□□□ -1.96
CTSDP07339 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC2.78□□□□□ -1.96
CTSDP07339 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC2.78□□□□□ -1.96
CTSDP07339 AC119674.1-207ENST00000641355 633 ntBASIC2.78□□□□□ -1.96
CTSDP07339 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.78□□□□□ -1.96
CTSDP07339 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CTSDP07339 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC2.78□□□□□ -1.96
CTSDP07339 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
CTSDP07339 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
CTSDP07339 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 350.8 ms