Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
TRGV3P03979 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC2.78□□□□□ -1.97
TRGV3P03979 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.97
TRGV3P03979 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC2.77□□□□□ -1.97
TRGV3P03979 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
TRGV3P03979 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC2.77□□□□□ -1.97
TRGV3P03979 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC2.77□□□□□ -1.97
TRGV3P03979 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
TRGV3P03979 RNU6-283P-201ENST00000364788 107 ntBASIC2.77□□□□□ -1.97
TRGV3P03979 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
TRGV3P03979 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC2.77□□□□□ -1.97
TRGV3P03979 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC2.77□□□□□ -1.97
TRGV3P03979 MIR218-2-201ENST00000385006 110 ntBASIC2.77□□□□□ -1.97
TRGV3P03979 U3.39-201ENST00000408569 239 ntBASIC2.77□□□□□ -1.97
TRGV3P03979 MIR1183-201ENST00000408856 89 ntBASIC2.77□□□□□ -1.97
TRGV3P03979 RN7SKP177-201ENST00000410567 355 ntBASIC2.77□□□□□ -1.97
TRGV3P03979 MTND4P22-201ENST00000413116 1169 ntBASIC2.77□□□□□ -1.97
TRGV3P03979 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC2.77□□□□□ -1.97
TRGV3P03979 RPS29P4-201ENST00000414733 161 ntBASIC2.77□□□□□ -1.97
TRGV3P03979 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC2.77□□□□□ -1.97
TRGV3P03979 RPL31P45-201ENST00000419532 356 ntBASIC2.77□□□□□ -1.97
TRGV3P03979 ARL4AP4-201ENST00000434170 518 ntBASIC2.77□□□□□ -1.97
TRGV3P03979 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC2.77□□□□□ -1.97
TRGV3P03979 SNORA84-201ENST00000459229 133 ntBASIC2.77□□□□□ -1.97
TRGV3P03979 SNORD108-201ENST00000459332 71 ntBASIC2.77□□□□□ -1.97
TRGV3P03979 AC104689.1-201ENST00000473356 768 ntBASIC2.77□□□□□ -1.97
TRGV3P03979 RPL21P103-201ENST00000479921 488 ntBASIC2.77□□□□□ -1.97
TRGV3P03979 AC104687.1-201ENST00000485829 412 ntBASIC2.77□□□□□ -1.97
TRGV3P03979 HMGB3P14-201ENST00000494195 599 ntBASIC2.77□□□□□ -1.97
TRGV3P03979 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC2.77□□□□□ -1.97
TRGV3P03979 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC2.77□□□□□ -1.97
TRGV3P03979 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC2.77□□□□□ -1.97
TRGV3P03979 SNORA70.18-201ENST00000516696 98 ntBASIC2.77□□□□□ -1.97
TRGV3P03979 IGKV2D-23-201ENST00000518179 286 ntBASIC2.77□□□□□ -1.97
TRGV3P03979 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC2.77□□□□□ -1.97
TRGV3P03979 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC2.77□□□□□ -1.97
TRGV3P03979 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
TRGV3P03979 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC2.77□□□□□ -1.97
TRGV3P03979 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC2.77□□□□□ -1.97
TRGV3P03979 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC2.77□□□□□ -1.97
TRGV3P03979 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC2.77□□□□□ -1.97
TRGV3P03979 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC2.77□□□□□ -1.97
TRGV3P03979 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC2.77□□□□□ -1.97
TRGV3P03979 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC2.77□□□□□ -1.97
TRGV3P03979 AC020914.6-201ENST00000594327 272 ntBASIC2.77□□□□□ -1.97
TRGV3P03979 AC079610.2-201ENST00000604818 690 ntBASIC2.77□□□□□ -1.97
TRGV3P03979 AC100814.1-201ENST00000606963 623 ntBASIC2.77□□□□□ -1.97
TRGV3P03979 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC2.77□□□□□ -1.97
TRGV3P03979 U7.8-201ENST00000619968 63 ntBASIC2.77□□□□□ -1.97
TRGV3P03979 AC004943.3-201ENST00000624116 600 ntBASIC2.77□□□□□ -1.97
TRGV3P03979 AC012442.3-202ENST00000636742 206 ntBASIC2.77□□□□□ -1.97
TRGV3P03979 TNPO1P3-201ENST00000436471 2662 ntBASIC2.77□□□□□ -1.97
TRGV3P03979 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC2.77□□□□□ -1.97
TRGV3P03979 MTCO1P14-201ENST00000441695 1559 ntBASIC2.77□□□□□ -1.97
TRGV3P03979 HSPA8P19-201ENST00000505359 1517 ntBASIC2.77□□□□□ -1.97
TRGV3P03979 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
TRGV3P03979 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
TRGV3P03979 NMD3P1-201ENST00000439704 1488 ntBASIC2.77□□□□□ -1.97
TRGV3P03979 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
TRGV3P03979 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
TRGV3P03979 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
TRGV3P03979 OTUD4P1-201ENST00000237841 3067 ntBASIC2.76□□□□□ -1.97
TRGV3P03979 XIAPP3-201ENST00000312918 795 ntBASIC2.76□□□□□ -1.97
TRGV3P03979 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC2.76□□□□□ -1.97
TRGV3P03979 FRG1CP-201ENST00000358464 769 ntBASIC2.76□□□□□ -1.97
TRGV3P03979 RNA5SP42-201ENST00000364278 115 ntBASIC2.76□□□□□ -1.97
TRGV3P03979 SNORD115-48-201ENST00000364764 76 ntBASIC2.76□□□□□ -1.97
TRGV3P03979 HMGB1P13-201ENST00000406019 642 ntBASIC2.76□□□□□ -1.97
TRGV3P03979 PRELID3BP11-201ENST00000414230 479 ntBASIC2.76□□□□□ -1.97
TRGV3P03979 AC127526.1-201ENST00000417526 366 ntBASIC2.76□□□□□ -1.97
TRGV3P03979 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC2.76□□□□□ -1.97
TRGV3P03979 MTND4P24-201ENST00000424002 397 ntBASIC2.76□□□□□ -1.97
TRGV3P03979 FO393419.3-201ENST00000428741 282 ntBASIC2.76□□□□□ -1.97
TRGV3P03979 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC2.76□□□□□ -1.97
TRGV3P03979 AC073063.1-201ENST00000434352 607 ntBASIC2.76□□□□□ -1.97
TRGV3P03979 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC2.76□□□□□ -1.97
TRGV3P03979 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
TRGV3P03979 AC097499.1-201ENST00000444277 208 ntBASIC2.76□□□□□ -1.97
TRGV3P03979 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC2.76□□□□□ -1.97
TRGV3P03979 TPTE2P6-202ENST00000445572 1007 ntBASIC2.76□□□□□ -1.97
TRGV3P03979 MTND3P4-201ENST00000453537 303 ntBASIC2.76□□□□□ -1.97
TRGV3P03979 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC2.76□□□□□ -1.97
TRGV3P03979 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC2.76□□□□□ -1.97
TRGV3P03979 AC091564.1-201ENST00000464563 479 ntBASIC2.76□□□□□ -1.97
TRGV3P03979 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC2.76□□□□□ -1.97
TRGV3P03979 AC106707.2-201ENST00000484182 374 ntBASIC2.76□□□□□ -1.97
TRGV3P03979 RPS3AP50-201ENST00000487064 803 ntBASIC2.76□□□□□ -1.97
TRGV3P03979 OR9N1P-202ENST00000494289 481 ntBASIC2.76□□□□□ -1.97
TRGV3P03979 AC092045.1-201ENST00000495716 1231 ntBASIC2.76□□□□□ -1.97
TRGV3P03979 PDLIM1P4-201ENST00000504327 1006 ntBASIC2.76□□□□□ -1.97
TRGV3P03979 AC110792.2-201ENST00000510278 224 ntBASIC2.76□□□□□ -1.97
TRGV3P03979 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC2.76□□□□□ -1.97
TRGV3P03979 AC008494.2-201ENST00000514544 370 ntBASIC2.76□□□□□ -1.97
TRGV3P03979 AC026403.1-201ENST00000518938 295 ntBASIC2.76□□□□□ -1.97
TRGV3P03979 COX6B1P6-201ENST00000522347 255 ntBASIC2.76□□□□□ -1.97
TRGV3P03979 AC091515.1-201ENST00000548110 679 ntBASIC2.76□□□□□ -1.97
TRGV3P03979 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC2.76□□□□□ -1.97
TRGV3P03979 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC2.76□□□□□ -1.97
TRGV3P03979 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC2.76□□□□□ -1.97
TRGV3P03979 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms