Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 OFD1P7Y-201ENST00000454643 1155 ntBASIC3.91□□□□□ -1.78
SNX3O60493 RPSAP50-201ENST00000481955 852 ntBASIC3.91□□□□□ -1.78
SNX3O60493 RN7SL691P-201ENST00000494487 301 ntBASIC3.91□□□□□ -1.78
SNX3O60493 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.91□□□□□ -1.78
SNX3O60493 AC113347.3-201ENST00000509113 148 ntBASIC3.91□□□□□ -1.78
SNX3O60493 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.91□□□□□ -1.78
SNX3O60493 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SNX3O60493 IGLV2-28-201ENST00000520681 304 ntBASIC3.91□□□□□ -1.78
SNX3O60493 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.91□□□□□ -1.78
SNX3O60493 PTP4A1P6-201ENST00000531034 478 ntBASIC3.91□□□□□ -1.78
SNX3O60493 HMGB3P26-201ENST00000560051 582 ntBASIC3.91□□□□□ -1.78
SNX3O60493 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC3.91□□□□□ -1.78
SNX3O60493 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC3.91□□□□□ -1.78
SNX3O60493 MIR4458-201ENST00000578872 75 ntBASIC3.91□□□□□ -1.78
SNX3O60493 MIR3934-201ENST00000579806 107 ntBASIC3.91□□□□□ -1.78
SNX3O60493 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.91□□□□□ -1.78
SNX3O60493 MIR5684-201ENST00000585074 65 ntBASIC3.91□□□□□ -1.78
SNX3O60493 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SNX3O60493 MTND3P19-201ENST00000603825 345 ntBASIC3.91□□□□□ -1.78
SNX3O60493 AC012409.3-201ENST00000611343 981 ntBASIC3.91□□□□□ -1.78
SNX3O60493 RNVU1-4-201ENST00000612985 164 ntBASIC3.91□□□□□ -1.78
SNX3O60493 AL391261.4-201ENST00000616012 481 ntBASIC3.91□□□□□ -1.78
SNX3O60493 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC3.91□□□□□ -1.78
SNX3O60493 MIR6729-201ENST00000618194 65 ntBASIC3.91□□□□□ -1.78
SNX3O60493 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC3.91□□□□□ -1.78
SNX3O60493 AL139089.1-201ENST00000620372 975 ntBASIC3.91□□□□□ -1.78
SNX3O60493 AC068787.1-201ENST00000623908 691 ntBASIC3.91□□□□□ -1.78
SNX3O60493 UGP2-231ENST00000627474 264 ntTSL 5 BASIC3.91□□□□□ -1.78
SNX3O60493 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.91□□□□□ -1.78
SNX3O60493 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.91□□□□□ -1.78
SNX3O60493 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SNX3O60493 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SNX3O60493 OR11H5P-202ENST00000641612 1325 ntBASIC3.91□□□□□ -1.78
SNX3O60493 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
SNX3O60493 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
SNX3O60493 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
SNX3O60493 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
SNX3O60493 C4BPAP1-201ENST00000415474 1893 ntBASIC3.9□□□□□ -1.78
SNX3O60493 EIF2AP4-201ENST00000424793 1781 ntBASIC3.9□□□□□ -1.79
SNX3O60493 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SNX3O60493 RNA5SP507-201ENST00000363603 121 ntBASIC3.9□□□□□ -1.79
SNX3O60493 RNU6-115P-201ENST00000364310 107 ntBASIC3.9□□□□□ -1.79
SNX3O60493 AC092642.1-201ENST00000392417 425 ntBASIC3.9□□□□□ -1.79
SNX3O60493 AL161909.1-201ENST00000397390 712 ntBASIC3.9□□□□□ -1.79
SNX3O60493 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SNX3O60493 RN7SKP229-201ENST00000410465 302 ntBASIC3.9□□□□□ -1.79
SNX3O60493 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.9□□□□□ -1.79
SNX3O60493 AL136133.1-201ENST00000413694 376 ntBASIC3.9□□□□□ -1.79
SNX3O60493 AL356320.2-201ENST00000417263 507 ntBASIC3.9□□□□□ -1.79
SNX3O60493 RPS15AP40-201ENST00000419621 391 ntBASIC3.9□□□□□ -1.79
SNX3O60493 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.9□□□□□ -1.79
SNX3O60493 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.9□□□□□ -1.79
SNX3O60493 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SNX3O60493 MTCO2P17-201ENST00000424336 677 ntBASIC3.9□□□□□ -1.79
SNX3O60493 DPRXP1-201ENST00000426312 460 ntBASIC3.9□□□□□ -1.79
SNX3O60493 CNOT7P1-201ENST00000429006 852 ntBASIC3.9□□□□□ -1.79
SNX3O60493 SEPT7P5-201ENST00000434048 306 ntBASIC3.9□□□□□ -1.79
SNX3O60493 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC3.9□□□□□ -1.79
SNX3O60493 AC092393.1-201ENST00000439625 742 ntBASIC3.9□□□□□ -1.79
SNX3O60493 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC3.9□□□□□ -1.79
SNX3O60493 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC3.9□□□□□ -1.79
SNX3O60493 EXTL2P1-201ENST00000446218 416 ntBASIC3.9□□□□□ -1.79
SNX3O60493 EIF2S2P2-201ENST00000447161 982 ntBASIC3.9□□□□□ -1.79
SNX3O60493 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.9□□□□□ -1.79
SNX3O60493 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.9□□□□□ -1.79
SNX3O60493 AC098824.1-201ENST00000453565 980 ntBASIC3.9□□□□□ -1.79
SNX3O60493 AC091685.2-201ENST00000454924 864 ntBASIC3.9□□□□□ -1.79
SNX3O60493 RNA5SP246-201ENST00000458909 119 ntBASIC3.9□□□□□ -1.79
SNX3O60493 AC005410.1-202ENST00000460347 485 ntBASIC3.9□□□□□ -1.79
SNX3O60493 AC004801.2-202ENST00000463559 283 ntBASIC3.9□□□□□ -1.79
SNX3O60493 VPS26AP1-201ENST00000483197 979 ntBASIC3.9□□□□□ -1.79
SNX3O60493 MTCO3P35-201ENST00000485582 781 ntBASIC3.9□□□□□ -1.79
SNX3O60493 TRBV12-2-201ENST00000489763 344 ntBASIC3.9□□□□□ -1.79
SNX3O60493 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.9□□□□□ -1.79
SNX3O60493 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.9□□□□□ -1.79
SNX3O60493 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.9□□□□□ -1.79
SNX3O60493 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.9□□□□□ -1.79
SNX3O60493 AP001317.1-201ENST00000531194 960 ntBASIC3.9□□□□□ -1.79
SNX3O60493 OR8K4P-201ENST00000534608 872 ntBASIC3.9□□□□□ -1.79
SNX3O60493 RFPL1S-203ENST00000539579 330 ntBASIC3.9□□□□□ -1.79
SNX3O60493 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.9□□□□□ -1.79
SNX3O60493 HMGN2P6-201ENST00000551091 273 ntBASIC3.9□□□□□ -1.79
SNX3O60493 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.9□□□□□ -1.79
SNX3O60493 AC023813.2-201ENST00000564321 469 ntBASIC3.9□□□□□ -1.79
SNX3O60493 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC3.9□□□□□ -1.79
SNX3O60493 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC3.9□□□□□ -1.79
SNX3O60493 AL450336.1-201ENST00000605180 586 ntBASIC3.9□□□□□ -1.79
SNX3O60493 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.9□□□□□ -1.79
SNX3O60493 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3.9□□□□□ -1.79
SNX3O60493 AL445423.1-201ENST00000609941 536 ntBASIC3.9□□□□□ -1.79
SNX3O60493 RMST_8.1-201ENST00000610287 165 ntBASIC3.9□□□□□ -1.79
SNX3O60493 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SNX3O60493 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.9□□□□□ -1.79
SNX3O60493 AC098679.5-201ENST00000624394 571 ntBASIC3.9□□□□□ -1.79
SNX3O60493 AC090506.2-201ENST00000624521 419 ntBASIC3.9□□□□□ -1.79
SNX3O60493 AP001002.2-201ENST00000625137 386 ntBASIC3.9□□□□□ -1.79
SNX3O60493 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC3.9□□□□□ -1.79
SNX3O60493 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC3.9□□□□□ -1.79
SNX3O60493 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.9□□□□□ -1.79
SNX3O60493 AC068620.4-201ENST00000636730 1182 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms