Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC4.78□□□□□ -1.64
PHGDHO43175 AC004448.2-201ENST00000422360 586 ntBASIC4.78□□□□□ -1.64
PHGDHO43175 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC4.78□□□□□ -1.64
PHGDHO43175 CYCSP46-201ENST00000423569 204 ntBASIC4.78□□□□□ -1.64
PHGDHO43175 AL512649.1-201ENST00000428997 581 ntBASIC4.78□□□□□ -1.64
PHGDHO43175 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC4.78□□□□□ -1.64
PHGDHO43175 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC4.78□□□□□ -1.64
PHGDHO43175 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC4.78□□□□□ -1.64
PHGDHO43175 AC093414.1-201ENST00000434712 514 ntBASIC4.78□□□□□ -1.64
PHGDHO43175 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC4.78□□□□□ -1.64
PHGDHO43175 IFNWP4-201ENST00000453148 294 ntBASIC4.78□□□□□ -1.64
PHGDHO43175 USP9YP34-201ENST00000453983 808 ntBASIC4.78□□□□□ -1.64
PHGDHO43175 RNU6-956P-201ENST00000458868 103 ntBASIC4.78□□□□□ -1.64
PHGDHO43175 RPL23AP56-201ENST00000460778 453 ntBASIC4.78□□□□□ -1.64
PHGDHO43175 AC074386.1-201ENST00000476560 767 ntBASIC4.78□□□□□ -1.64
PHGDHO43175 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.78□□□□□ -1.64
PHGDHO43175 AC090453.1-201ENST00000495560 436 ntBASIC4.78□□□□□ -1.64
PHGDHO43175 AC008953.1-201ENST00000497334 318 ntBASIC4.78□□□□□ -1.64
PHGDHO43175 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.78□□□□□ -1.64
PHGDHO43175 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.78□□□□□ -1.64
PHGDHO43175 AC093809.1-201ENST00000509155 340 ntBASIC4.78□□□□□ -1.64
PHGDHO43175 MTCO3P7-201ENST00000510008 774 ntBASIC4.78□□□□□ -1.64
PHGDHO43175 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.78□□□□□ -1.64
PHGDHO43175 RNA5SP92-201ENST00000516437 110 ntBASIC4.78□□□□□ -1.64
PHGDHO43175 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.78□□□□□ -1.64
PHGDHO43175 HSPA8P13-201ENST00000523715 472 ntBASIC4.78□□□□□ -1.64
PHGDHO43175 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.78□□□□□ -1.64
PHGDHO43175 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.78□□□□□ -1.64
PHGDHO43175 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.78□□□□□ -1.64
PHGDHO43175 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC4.78□□□□□ -1.64
PHGDHO43175 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PHGDHO43175 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC4.78□□□□□ -1.64
PHGDHO43175 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.78□□□□□ -1.64
PHGDHO43175 AC006362.1-201ENST00000567392 174 ntBASIC4.78□□□□□ -1.64
PHGDHO43175 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.78□□□□□ -1.64
PHGDHO43175 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.78□□□□□ -1.64
PHGDHO43175 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.78□□□□□ -1.64
PHGDHO43175 AC067852.4-201ENST00000590314 478 ntBASIC4.78□□□□□ -1.64
PHGDHO43175 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.78□□□□□ -1.64
PHGDHO43175 AC006116.3-201ENST00000592968 361 ntBASIC4.78□□□□□ -1.64
PHGDHO43175 BNIP3P23-201ENST00000599655 511 ntBASIC4.78□□□□□ -1.64
PHGDHO43175 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.78□□□□□ -1.64
PHGDHO43175 AC080013.4-201ENST00000607624 649 ntBASIC4.78□□□□□ -1.64
PHGDHO43175 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.78□□□□□ -1.64
PHGDHO43175 SNORD91B-202ENST00000608459 222 ntBASIC4.78□□□□□ -1.64
PHGDHO43175 AC103710.4-201ENST00000609301 899 ntBASIC4.78□□□□□ -1.64
PHGDHO43175 DLEU1_2.1-201ENST00000617920 342 ntBASIC4.78□□□□□ -1.64
PHGDHO43175 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC4.78□□□□□ -1.64
PHGDHO43175 AL596275.2-204ENST00000641628 552 ntBASIC4.78□□□□□ -1.64
PHGDHO43175 AL596275.2-206ENST00000641957 626 ntBASIC4.78□□□□□ -1.64
PHGDHO43175 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
PHGDHO43175 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PHGDHO43175 SOCS5P3-201ENST00000425115 1576 ntBASIC4.78□□□□□ -1.64
PHGDHO43175 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
PHGDHO43175 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
PHGDHO43175 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
PHGDHO43175 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.77□□□□□ -1.65
PHGDHO43175 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PHGDHO43175 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PHGDHO43175 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
PHGDHO43175 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PHGDHO43175 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.77□□□□□ -1.65
PHGDHO43175 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
PHGDHO43175 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.77□□□□□ -1.65
PHGDHO43175 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PHGDHO43175 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
PHGDHO43175 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PHGDHO43175 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PHGDHO43175 AC093535.2-201ENST00000624769 2326 ntBASIC4.77□□□□□ -1.65
PHGDHO43175 AC099654.2-201ENST00000433031 1980 ntBASIC4.77□□□□□ -1.65
PHGDHO43175 AL121657.1-201ENST00000327215 531 ntBASIC4.77□□□□□ -1.65
PHGDHO43175 RNU6-289P-201ENST00000364093 107 ntBASIC4.77□□□□□ -1.65
PHGDHO43175 AC025750.1-201ENST00000399891 379 ntBASIC4.77□□□□□ -1.65
PHGDHO43175 Z97832.1-201ENST00000402490 328 ntBASIC4.77□□□□□ -1.65
PHGDHO43175 ARL4AP5-201ENST00000404372 599 ntBASIC4.77□□□□□ -1.65
PHGDHO43175 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.77□□□□□ -1.65
PHGDHO43175 RNA5SP296-201ENST00000410523 111 ntBASIC4.77□□□□□ -1.65
PHGDHO43175 EIF4A1P3-201ENST00000411521 244 ntBASIC4.77□□□□□ -1.65
PHGDHO43175 TPMTP2-201ENST00000414372 726 ntBASIC4.77□□□□□ -1.65
PHGDHO43175 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4.77□□□□□ -1.65
PHGDHO43175 FNDC3CP-201ENST00000420795 1155 ntBASIC4.77□□□□□ -1.65
PHGDHO43175 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.77□□□□□ -1.65
PHGDHO43175 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC4.77□□□□□ -1.65
PHGDHO43175 AL451139.1-201ENST00000434718 346 ntBASIC4.77□□□□□ -1.65
PHGDHO43175 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.77□□□□□ -1.65
PHGDHO43175 AL353706.1-201ENST00000436728 494 ntBASIC4.77□□□□□ -1.65
PHGDHO43175 UBE2V1P3-201ENST00000439651 417 ntBASIC4.77□□□□□ -1.65
PHGDHO43175 RPL36AP15-201ENST00000444514 266 ntBASIC4.77□□□□□ -1.65
PHGDHO43175 COX6CP12-201ENST00000446748 202 ntBASIC4.77□□□□□ -1.65
PHGDHO43175 PAXBP1P1-201ENST00000449315 447 ntBASIC4.77□□□□□ -1.65
PHGDHO43175 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.77□□□□□ -1.65
PHGDHO43175 VN1R32P-201ENST00000452234 905 ntBASIC4.77□□□□□ -1.65
PHGDHO43175 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC4.77□□□□□ -1.65
PHGDHO43175 RPS26P39-201ENST00000469206 341 ntBASIC4.77□□□□□ -1.65
PHGDHO43175 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC4.77□□□□□ -1.65
PHGDHO43175 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.77□□□□□ -1.65
PHGDHO43175 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.77□□□□□ -1.65
PHGDHO43175 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.77□□□□□ -1.65
PHGDHO43175 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.77□□□□□ -1.65
PHGDHO43175 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms