Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.07□□□□□ -1.76
TO15178 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.07□□□□□ -1.76
TO15178 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TO15178 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.07□□□□□ -1.76
TO15178 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.07□□□□□ -1.76
TO15178 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TO15178 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TO15178 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TO15178 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.06□□□□□ -1.76
TO15178 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
TO15178 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TO15178 MTND5P31-201ENST00000419366 1374 ntBASIC4.06□□□□□ -1.76
TO15178 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TO15178 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TO15178 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TO15178 AC008033.1-201ENST00000216407 1162 ntBASIC4.06□□□□□ -1.76
TO15178 AC007685.1-201ENST00000329806 452 ntBASIC4.06□□□□□ -1.76
TO15178 RNA5SP447-201ENST00000363749 119 ntBASIC4.06□□□□□ -1.76
TO15178 SUGT1P1-201ENST00000379514 476 ntBASIC4.06□□□□□ -1.76
TO15178 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.06□□□□□ -1.76
TO15178 MIR93-201ENST00000385024 80 ntBASIC4.06□□□□□ -1.76
TO15178 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
TO15178 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.06□□□□□ -1.76
TO15178 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.06□□□□□ -1.76
TO15178 FCF1P2-201ENST00000415284 583 ntBASIC4.06□□□□□ -1.76
TO15178 ELOCP9-201ENST00000418624 239 ntBASIC4.06□□□□□ -1.76
TO15178 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.06□□□□□ -1.76
TO15178 RPL7P44-201ENST00000424827 742 ntBASIC4.06□□□□□ -1.76
TO15178 DNAJC19P7-201ENST00000428811 344 ntBASIC4.06□□□□□ -1.76
TO15178 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.06□□□□□ -1.76
TO15178 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.06□□□□□ -1.76
TO15178 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC4.06□□□□□ -1.76
TO15178 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.06□□□□□ -1.76
TO15178 MTCO2P25-201ENST00000447065 681 ntBASIC4.06□□□□□ -1.76
TO15178 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.06□□□□□ -1.76
TO15178 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC4.06□□□□□ -1.76
TO15178 USP9YP25-201ENST00000457708 443 ntBASIC4.06□□□□□ -1.76
TO15178 snoU13.7-201ENST00000459220 104 ntBASIC4.06□□□□□ -1.76
TO15178 RN7SL98P-201ENST00000462271 300 ntBASIC4.06□□□□□ -1.76
TO15178 RPL5P24-201ENST00000463742 885 ntBASIC4.06□□□□□ -1.76
TO15178 AP000873.1-201ENST00000463987 400 ntBASIC4.06□□□□□ -1.76
TO15178 AC010307.1-201ENST00000467206 836 ntBASIC4.06□□□□□ -1.76
TO15178 RN7SL41P-201ENST00000476144 297 ntBASIC4.06□□□□□ -1.76
TO15178 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC4.06□□□□□ -1.76
TO15178 AC021146.5-201ENST00000503544 545 ntBASIC4.06□□□□□ -1.76
TO15178 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TO15178 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.06□□□□□ -1.76
TO15178 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC4.06□□□□□ -1.76
TO15178 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.06□□□□□ -1.76
TO15178 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.06□□□□□ -1.76
TO15178 TOMM20P2-201ENST00000540082 421 ntBASIC4.06□□□□□ -1.76
TO15178 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC4.06□□□□□ -1.76
TO15178 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC4.06□□□□□ -1.76
TO15178 AC124068.1-201ENST00000563131 678 ntBASIC4.06□□□□□ -1.76
TO15178 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.06□□□□□ -1.76
TO15178 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC4.06□□□□□ -1.76
TO15178 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.06□□□□□ -1.76
TO15178 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC4.06□□□□□ -1.76
TO15178 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.06□□□□□ -1.76
TO15178 AC008638.3-201ENST00000603341 463 ntBASIC4.06□□□□□ -1.76
TO15178 RNA5SP108-201ENST00000605921 117 ntBASIC4.06□□□□□ -1.76
TO15178 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.06□□□□□ -1.76
TO15178 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
TO15178 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.06□□□□□ -1.76
TO15178 AC079395.3-201ENST00000615161 484 ntBASIC4.06□□□□□ -1.76
TO15178 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.06□□□□□ -1.76
TO15178 AF001550.2-201ENST00000636643 217 ntBASIC4.06□□□□□ -1.76
TO15178 AC138649.5-201ENST00000637456 137 ntBASIC4.06□□□□□ -1.76
TO15178 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
TO15178 AC016588.2-201ENST00000632484 3021 ntBASIC4.06□□□□□ -1.76
TO15178 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TO15178 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TO15178 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.06□□□□□ -1.76
TO15178 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.06□□□□□ -1.76
TO15178 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TO15178 AC011978.2-201ENST00000569835 2054 ntBASIC4.06□□□□□ -1.76
TO15178 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
TO15178 ZNF876P-202ENST00000398732 1485 ntBASIC4.05□□□□□ -1.76
TO15178 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.05□□□□□ -1.76
TO15178 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
TO15178 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.05□□□□□ -1.76
TO15178 AC008725.1-201ENST00000605123 2263 ntBASIC4.05□□□□□ -1.76
TO15178 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
TO15178 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.05□□□□□ -1.76
TO15178 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
TO15178 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
TO15178 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
TO15178 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
TO15178 RNU1-32P-201ENST00000363937 159 ntBASIC4.05□□□□□ -1.76
TO15178 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
TO15178 RN7SKP167-201ENST00000411047 285 ntBASIC4.05□□□□□ -1.76
TO15178 SNRPFP1-201ENST00000414761 252 ntBASIC4.05□□□□□ -1.76
TO15178 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC4.05□□□□□ -1.76
TO15178 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC4.05□□□□□ -1.76
TO15178 RPL36P19-201ENST00000430744 301 ntBASIC4.05□□□□□ -1.76
TO15178 AC011998.1-201ENST00000433403 117 ntBASIC4.05□□□□□ -1.76
TO15178 AL353748.1-201ENST00000440753 474 ntBASIC4.05□□□□□ -1.76
TO15178 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.05□□□□□ -1.76
TO15178 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.05□□□□□ -1.76
TO15178 ATP1B1P1-201ENST00000509767 915 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms