Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
NEDD8-MDP1E9PL57 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
NEDD8-MDP1E9PL57 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
NEDD8-MDP1E9PL57 RNU6-1000P-201ENST00000391066 106 ntBASIC3.91□□□□□ -1.78
NEDD8-MDP1E9PL57 AC007066.1-201ENST00000392902 381 ntBASIC3.91□□□□□ -1.78
NEDD8-MDP1E9PL57 MTATP6P31-201ENST00000406985 692 ntBASIC3.91□□□□□ -1.78
NEDD8-MDP1E9PL57 UBE2V1P9-201ENST00000414760 368 ntBASIC3.91□□□□□ -1.78
NEDD8-MDP1E9PL57 AL035423.1-201ENST00000420331 213 ntBASIC3.91□□□□□ -1.78
NEDD8-MDP1E9PL57 AL391219.1-201ENST00000422570 483 ntBASIC3.91□□□□□ -1.78
NEDD8-MDP1E9PL57 AC073069.1-201ENST00000428657 441 ntBASIC3.91□□□□□ -1.78
NEDD8-MDP1E9PL57 AC091286.1-201ENST00000431233 461 ntBASIC3.91□□□□□ -1.78
NEDD8-MDP1E9PL57 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.91□□□□□ -1.78
NEDD8-MDP1E9PL57 ELOCP18-201ENST00000434209 337 ntBASIC3.91□□□□□ -1.78
NEDD8-MDP1E9PL57 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
NEDD8-MDP1E9PL57 FABP5P3-201ENST00000437960 408 ntBASIC3.91□□□□□ -1.78
NEDD8-MDP1E9PL57 RNF2P1-201ENST00000442955 1010 ntBASIC3.91□□□□□ -1.78
NEDD8-MDP1E9PL57 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.91□□□□□ -1.78
NEDD8-MDP1E9PL57 RPL23AP71-201ENST00000470966 469 ntBASIC3.91□□□□□ -1.78
NEDD8-MDP1E9PL57 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.91□□□□□ -1.78
NEDD8-MDP1E9PL57 RPL31P61-201ENST00000496160 376 ntBASIC3.91□□□□□ -1.78
NEDD8-MDP1E9PL57 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.91□□□□□ -1.78
NEDD8-MDP1E9PL57 AC069306.1-201ENST00000507006 843 ntBASIC3.91□□□□□ -1.78
NEDD8-MDP1E9PL57 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.91□□□□□ -1.78
NEDD8-MDP1E9PL57 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.91□□□□□ -1.78
NEDD8-MDP1E9PL57 AC026403.1-201ENST00000518938 295 ntBASIC3.91□□□□□ -1.78
NEDD8-MDP1E9PL57 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.91□□□□□ -1.78
NEDD8-MDP1E9PL57 RFPL1S-203ENST00000539579 330 ntBASIC3.91□□□□□ -1.78
NEDD8-MDP1E9PL57 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.91□□□□□ -1.78
NEDD8-MDP1E9PL57 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.91□□□□□ -1.78
NEDD8-MDP1E9PL57 AC011492.1-201ENST00000600023 315 ntBASIC3.91□□□□□ -1.78
NEDD8-MDP1E9PL57 AC012603.1-201ENST00000606424 528 ntBASIC3.91□□□□□ -1.78
NEDD8-MDP1E9PL57 AC124016.2-201ENST00000610058 665 ntBASIC3.91□□□□□ -1.78
NEDD8-MDP1E9PL57 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
NEDD8-MDP1E9PL57 AC123768.4-201ENST00000616244 701 ntBASIC3.91□□□□□ -1.78
NEDD8-MDP1E9PL57 AP006248.2-201ENST00000623309 592 ntBASIC3.91□□□□□ -1.78
NEDD8-MDP1E9PL57 CR392039.4-201ENST00000624968 501 ntBASIC3.91□□□□□ -1.78
NEDD8-MDP1E9PL57 AC126544.2-201ENST00000625174 749 ntBASIC3.91□□□□□ -1.78
NEDD8-MDP1E9PL57 AC006927.2-201ENST00000639256 389 ntBASIC3.91□□□□□ -1.78
NEDD8-MDP1E9PL57 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
NEDD8-MDP1E9PL57 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
NEDD8-MDP1E9PL57 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
NEDD8-MDP1E9PL57 MTND4P9-201ENST00000507819 1346 ntBASIC3.91□□□□□ -1.78
NEDD8-MDP1E9PL57 AC104446.1-201ENST00000613728 1321 ntBASIC3.91□□□□□ -1.78
NEDD8-MDP1E9PL57 PHKBP1-201ENST00000450951 1951 ntBASIC3.91□□□□□ -1.78
NEDD8-MDP1E9PL57 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
NEDD8-MDP1E9PL57 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.9□□□□□ -1.78
NEDD8-MDP1E9PL57 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
NEDD8-MDP1E9PL57 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.78
NEDD8-MDP1E9PL57 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.9□□□□□ -1.78
NEDD8-MDP1E9PL57 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
NEDD8-MDP1E9PL57 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
NEDD8-MDP1E9PL57 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
NEDD8-MDP1E9PL57 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
NEDD8-MDP1E9PL57 RNU5B-4P-201ENST00000363508 111 ntBASIC3.9□□□□□ -1.79
NEDD8-MDP1E9PL57 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
NEDD8-MDP1E9PL57 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
NEDD8-MDP1E9PL57 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC3.9□□□□□ -1.79
NEDD8-MDP1E9PL57 YME1L1P1-201ENST00000429435 297 ntBASIC3.9□□□□□ -1.79
NEDD8-MDP1E9PL57 AC009263.1-201ENST00000441193 1239 ntBASIC3.9□□□□□ -1.79
NEDD8-MDP1E9PL57 AC092809.1-201ENST00000441469 474 ntBASIC3.9□□□□□ -1.79
NEDD8-MDP1E9PL57 RPS7P5-201ENST00000441482 581 ntBASIC3.9□□□□□ -1.79
NEDD8-MDP1E9PL57 RPS26P30-201ENST00000443431 335 ntBASIC3.9□□□□□ -1.79
NEDD8-MDP1E9PL57 SETD6P1-201ENST00000444575 317 ntBASIC3.9□□□□□ -1.79
NEDD8-MDP1E9PL57 YWHAQP9-201ENST00000445891 512 ntBASIC3.9□□□□□ -1.79
NEDD8-MDP1E9PL57 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.9□□□□□ -1.79
NEDD8-MDP1E9PL57 RPL7P24-201ENST00000493052 752 ntBASIC3.9□□□□□ -1.79
NEDD8-MDP1E9PL57 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.9□□□□□ -1.79
NEDD8-MDP1E9PL57 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
NEDD8-MDP1E9PL57 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.9□□□□□ -1.79
NEDD8-MDP1E9PL57 AC011611.5-201ENST00000552477 578 ntBASIC3.9□□□□□ -1.79
NEDD8-MDP1E9PL57 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.9□□□□□ -1.79
NEDD8-MDP1E9PL57 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.9□□□□□ -1.79
NEDD8-MDP1E9PL57 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.9□□□□□ -1.79
NEDD8-MDP1E9PL57 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.9□□□□□ -1.79
NEDD8-MDP1E9PL57 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.9□□□□□ -1.79
NEDD8-MDP1E9PL57 AC090751.1-201ENST00000566966 267 ntBASIC3.9□□□□□ -1.79
NEDD8-MDP1E9PL57 MIR5187-201ENST00000583479 76 ntBASIC3.9□□□□□ -1.79
NEDD8-MDP1E9PL57 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.9□□□□□ -1.79
NEDD8-MDP1E9PL57 AC244505.7-201ENST00000599675 272 ntBASIC3.9□□□□□ -1.79
NEDD8-MDP1E9PL57 AP003117.1-201ENST00000602771 554 ntBASIC3.9□□□□□ -1.79
NEDD8-MDP1E9PL57 AP002906.1-201ENST00000603405 233 ntBASIC3.9□□□□□ -1.79
NEDD8-MDP1E9PL57 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.9□□□□□ -1.79
NEDD8-MDP1E9PL57 AL139022.2-201ENST00000606934 443 ntBASIC3.9□□□□□ -1.79
NEDD8-MDP1E9PL57 AC112503.1-201ENST00000608436 391 ntBASIC3.9□□□□□ -1.79
NEDD8-MDP1E9PL57 AC128687.2-201ENST00000609657 566 ntBASIC3.9□□□□□ -1.79
NEDD8-MDP1E9PL57 AC103858.2-201ENST00000621471 543 ntBASIC3.9□□□□□ -1.79
NEDD8-MDP1E9PL57 AC244100.1-202ENST00000621554 382 ntBASIC3.9□□□□□ -1.79
NEDD8-MDP1E9PL57 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
NEDD8-MDP1E9PL57 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
NEDD8-MDP1E9PL57 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
NEDD8-MDP1E9PL57 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.89□□□□□ -1.79
NEDD8-MDP1E9PL57 AC083899.2-201ENST00000423285 1376 ntBASIC3.89□□□□□ -1.79
NEDD8-MDP1E9PL57 AC106871.1-201ENST00000568324 3102 ntBASIC3.89□□□□□ -1.79
NEDD8-MDP1E9PL57 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
NEDD8-MDP1E9PL57 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.89□□□□□ -1.79
NEDD8-MDP1E9PL57 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
NEDD8-MDP1E9PL57 AL592437.2-201ENST00000421655 2434 ntBASIC3.89□□□□□ -1.79
NEDD8-MDP1E9PL57 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
NEDD8-MDP1E9PL57 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.89□□□□□ -1.79
NEDD8-MDP1E9PL57 U6.112-201ENST00000384129 70 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms