Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 AL391417.1-201ENST00000404100 426 ntBASIC4.04□□□□□ -1.76
RGPD3A6NKT7 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.04□□□□□ -1.76
RGPD3A6NKT7 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC4.04□□□□□ -1.76
RGPD3A6NKT7 RPS20P32-201ENST00000456044 356 ntBASIC4.04□□□□□ -1.76
RGPD3A6NKT7 RPS3AP50-201ENST00000487064 803 ntBASIC4.04□□□□□ -1.76
RGPD3A6NKT7 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.04□□□□□ -1.76
RGPD3A6NKT7 MIR4524B-201ENST00000581569 115 ntBASIC4.04□□□□□ -1.76
RGPD3A6NKT7 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC4.04□□□□□ -1.76
RGPD3A6NKT7 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.04□□□□□ -1.76
RGPD3A6NKT7 RNU6-249P-201ENST00000363016 102 ntBASIC4.04□□□□□ -1.76
RGPD3A6NKT7 AL645937.1-202ENST00000421799 937 ntBASIC4.04□□□□□ -1.76
RGPD3A6NKT7 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.04□□□□□ -1.76
RGPD3A6NKT7 AC069499.1-201ENST00000489433 509 ntBASIC4.04□□□□□ -1.76
RGPD3A6NKT7 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.04□□□□□ -1.76
RGPD3A6NKT7 COX6CP8-201ENST00000522620 226 ntBASIC4.04□□□□□ -1.76
RGPD3A6NKT7 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.04□□□□□ -1.76
RGPD3A6NKT7 AC004832.5-201ENST00000608677 401 ntBASIC4.04□□□□□ -1.76
RGPD3A6NKT7 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
RGPD3A6NKT7 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
RGPD3A6NKT7 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.04□□□□□ -1.76
RGPD3A6NKT7 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RGPD3A6NKT7 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.03□□□□□ -1.76
RGPD3A6NKT7 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RGPD3A6NKT7 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RGPD3A6NKT7 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
RGPD3A6NKT7 ZNF603P-201ENST00000405613 487 ntBASIC4.03□□□□□ -1.76
RGPD3A6NKT7 AL357552.1-201ENST00000445254 415 ntBASIC4.03□□□□□ -1.76
RGPD3A6NKT7 AC108938.1-201ENST00000451204 136 ntBASIC4.03□□□□□ -1.76
RGPD3A6NKT7 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC4.03□□□□□ -1.76
RGPD3A6NKT7 SEPT7P3-201ENST00000455017 621 ntBASIC4.03□□□□□ -1.76
RGPD3A6NKT7 AC005229.2-201ENST00000456995 399 ntBASIC4.03□□□□□ -1.76
RGPD3A6NKT7 APOA2-205ENST00000468465 421 ntTSL 2 BASIC4.03□□□□□ -1.76
RGPD3A6NKT7 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.03□□□□□ -1.76
RGPD3A6NKT7 HIGD1AP13-201ENST00000509878 289 ntBASIC4.03□□□□□ -1.76
RGPD3A6NKT7 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC4.03□□□□□ -1.76
RGPD3A6NKT7 AC017037.2-201ENST00000513850 890 ntBASIC4.03□□□□□ -1.76
RGPD3A6NKT7 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
RGPD3A6NKT7 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.03□□□□□ -1.76
RGPD3A6NKT7 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.03□□□□□ -1.76
RGPD3A6NKT7 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
RGPD3A6NKT7 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
RGPD3A6NKT7 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.03□□□□□ -1.76
RGPD3A6NKT7 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RGPD3A6NKT7 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RGPD3A6NKT7 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RGPD3A6NKT7 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.77
RGPD3A6NKT7 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RGPD3A6NKT7 TTC39DP-201ENST00000416781 1688 ntBASIC4.02□□□□□ -1.77
RGPD3A6NKT7 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.02□□□□□ -1.77
RGPD3A6NKT7 ASNSP3-201ENST00000451989 1306 ntBASIC4.02□□□□□ -1.77
RGPD3A6NKT7 NPM1P11-201ENST00000417106 855 ntBASIC4.02□□□□□ -1.77
RGPD3A6NKT7 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.02□□□□□ -1.77
RGPD3A6NKT7 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.02□□□□□ -1.77
RGPD3A6NKT7 OR10D4P-201ENST00000525892 951 ntBASIC4.02□□□□□ -1.77
RGPD3A6NKT7 AHI1-217ENST00000534469 680 ntTSL 3 BASIC4.02□□□□□ -1.77
RGPD3A6NKT7 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.02□□□□□ -1.77
RGPD3A6NKT7 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.02□□□□□ -1.77
RGPD3A6NKT7 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.02□□□□□ -1.77
RGPD3A6NKT7 AL451142.2-201ENST00000429076 2090 ntBASIC4.02□□□□□ -1.77
RGPD3A6NKT7 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.02□□□□□ -1.77
RGPD3A6NKT7 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RGPD3A6NKT7 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RGPD3A6NKT7 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
RGPD3A6NKT7 AC004552.1-201ENST00000419089 348 ntBASIC4.02□□□□□ -1.77
RGPD3A6NKT7 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.02□□□□□ -1.77
RGPD3A6NKT7 AC008264.1-201ENST00000447612 367 ntBASIC4.02□□□□□ -1.77
RGPD3A6NKT7 ELOCP23-201ENST00000452014 332 ntBASIC4.02□□□□□ -1.77
RGPD3A6NKT7 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.02□□□□□ -1.77
RGPD3A6NKT7 RN7SL93P-201ENST00000463035 293 ntBASIC4.02□□□□□ -1.77
RGPD3A6NKT7 RPS26P3-201ENST00000470205 348 ntBASIC4.02□□□□□ -1.77
RGPD3A6NKT7 AC090543.2-201ENST00000483963 348 ntBASIC4.02□□□□□ -1.77
RGPD3A6NKT7 AC004057.1-201ENST00000485827 348 ntBASIC4.02□□□□□ -1.77
RGPD3A6NKT7 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC4.02□□□□□ -1.77
RGPD3A6NKT7 FCF1P3-201ENST00000496394 590 ntBASIC4.02□□□□□ -1.77
RGPD3A6NKT7 AC009812.2-201ENST00000517657 457 ntBASIC4.02□□□□□ -1.77
RGPD3A6NKT7 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.02□□□□□ -1.77
RGPD3A6NKT7 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.02□□□□□ -1.77
RGPD3A6NKT7 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.02□□□□□ -1.77
RGPD3A6NKT7 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.02□□□□□ -1.77
RGPD3A6NKT7 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
RGPD3A6NKT7 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RGPD3A6NKT7 RNU6-859P-201ENST00000362728 107 ntBASIC4.01□□□□□ -1.77
RGPD3A6NKT7 SNORA18.3-201ENST00000384122 132 ntBASIC4.01□□□□□ -1.77
RGPD3A6NKT7 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.01□□□□□ -1.77
RGPD3A6NKT7 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.01□□□□□ -1.77
RGPD3A6NKT7 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC4.01□□□□□ -1.77
RGPD3A6NKT7 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC4.01□□□□□ -1.77
RGPD3A6NKT7 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.01□□□□□ -1.77
RGPD3A6NKT7 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC4.01□□□□□ -1.77
RGPD3A6NKT7 RPL23AP67-201ENST00000465341 474 ntBASIC4.01□□□□□ -1.77
RGPD3A6NKT7 AC117440.1-201ENST00000474107 571 ntBASIC4.01□□□□□ -1.77
RGPD3A6NKT7 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC4.01□□□□□ -1.77
RGPD3A6NKT7 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC4.01□□□□□ -1.77
RGPD3A6NKT7 AC099506.2-201ENST00000623074 221 ntBASIC4.01□□□□□ -1.77
RGPD3A6NKT7 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.01□□□□□ -1.77
RGPD3A6NKT7 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.01□□□□□ -1.77
RGPD3A6NKT7 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RGPD3A6NKT7 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
RGPD3A6NKT7 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
RGPD3A6NKT7 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms