Protein–RNA interactions for Protein: Q9Y6Q1

CAPN6, Calpain-6, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN6Q9Y6Q1 LINC01963-201ENST00000562038 3148 ntBASIC5.67□□□□□ -1.5
CAPN6Q9Y6Q1 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CAPN6Q9Y6Q1 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CAPN6Q9Y6Q1 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CAPN6Q9Y6Q1 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CAPN6Q9Y6Q1 MIR375-201ENST00000362103 64 ntBASIC5.67□□□□□ -1.5
CAPN6Q9Y6Q1 Y_RNA.67-201ENST00000362870 100 ntBASIC5.67□□□□□ -1.5
CAPN6Q9Y6Q1 RN7SKP6-201ENST00000364795 319 ntBASIC5.67□□□□□ -1.5
CAPN6Q9Y6Q1 RNU6-373P-201ENST00000411247 98 ntBASIC5.67□□□□□ -1.5
CAPN6Q9Y6Q1 DPPA2P2-201ENST00000418220 897 ntBASIC5.67□□□□□ -1.5
CAPN6Q9Y6Q1 OR51AB1P-201ENST00000429046 620 ntBASIC5.67□□□□□ -1.5
CAPN6Q9Y6Q1 RPL12P18-201ENST00000437175 325 ntBASIC5.67□□□□□ -1.5
CAPN6Q9Y6Q1 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC5.67□□□□□ -1.5
CAPN6Q9Y6Q1 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.67□□□□□ -1.5
CAPN6Q9Y6Q1 AL121877.1-201ENST00000453704 622 ntBASIC5.67□□□□□ -1.5
CAPN6Q9Y6Q1 AC108161.1-201ENST00000461060 402 ntBASIC5.67□□□□□ -1.5
CAPN6Q9Y6Q1 RPL21P71-201ENST00000465598 459 ntBASIC5.67□□□□□ -1.5
CAPN6Q9Y6Q1 AC083798.1-201ENST00000472671 131 ntBASIC5.67□□□□□ -1.5
CAPN6Q9Y6Q1 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC5.67□□□□□ -1.5
CAPN6Q9Y6Q1 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.67□□□□□ -1.5
CAPN6Q9Y6Q1 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CAPN6Q9Y6Q1 AP003181.2-201ENST00000528941 181 ntBASIC5.67□□□□□ -1.5
CAPN6Q9Y6Q1 AP004607.2-201ENST00000533949 322 ntBASIC5.67□□□□□ -1.5
CAPN6Q9Y6Q1 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC5.67□□□□□ -1.5
CAPN6Q9Y6Q1 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CAPN6Q9Y6Q1 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.67□□□□□ -1.5
CAPN6Q9Y6Q1 AC008127.2-201ENST00000549925 1075 ntBASIC5.67□□□□□ -1.5
CAPN6Q9Y6Q1 AC026826.3-201ENST00000561747 158 ntBASIC5.67□□□□□ -1.5
CAPN6Q9Y6Q1 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.67□□□□□ -1.5
CAPN6Q9Y6Q1 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC5.67□□□□□ -1.5
CAPN6Q9Y6Q1 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.67□□□□□ -1.5
CAPN6Q9Y6Q1 AC012616.1-201ENST00000600294 197 ntBASIC5.67□□□□□ -1.5
CAPN6Q9Y6Q1 AC109583.2-201ENST00000617367 129 ntBASIC5.67□□□□□ -1.5
CAPN6Q9Y6Q1 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.67□□□□□ -1.5
CAPN6Q9Y6Q1 MTND5P42-201ENST00000637720 498 ntBASIC5.67□□□□□ -1.5
CAPN6Q9Y6Q1 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CAPN6Q9Y6Q1 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC5.67□□□□□ -1.5
CAPN6Q9Y6Q1 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
CAPN6Q9Y6Q1 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.67□□□□□ -1.5
CAPN6Q9Y6Q1 AC100778.3-201ENST00000580060 1750 ntBASIC5.67□□□□□ -1.5
CAPN6Q9Y6Q1 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CAPN6Q9Y6Q1 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CAPN6Q9Y6Q1 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CAPN6Q9Y6Q1 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
CAPN6Q9Y6Q1 AL731532.2-201ENST00000623542 1953 ntBASIC5.66□□□□□ -1.5
CAPN6Q9Y6Q1 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CAPN6Q9Y6Q1 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.66□□□□□ -1.5
CAPN6Q9Y6Q1 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CAPN6Q9Y6Q1 RNU1-19P-201ENST00000363306 165 ntBASIC5.66□□□□□ -1.5
CAPN6Q9Y6Q1 Y_RNA.138-201ENST00000363462 102 ntBASIC5.66□□□□□ -1.5
CAPN6Q9Y6Q1 RNU1-39P-201ENST00000383897 165 ntBASIC5.66□□□□□ -1.5
CAPN6Q9Y6Q1 AC004386.1-201ENST00000393214 761 ntBASIC5.66□□□□□ -1.5
CAPN6Q9Y6Q1 RPS20P2-201ENST00000402520 389 ntBASIC5.66□□□□□ -1.5
CAPN6Q9Y6Q1 RPS3AP2-201ENST00000407190 754 ntBASIC5.66□□□□□ -1.5
CAPN6Q9Y6Q1 AC127391.1-201ENST00000411737 98 ntBASIC5.66□□□□□ -1.5
CAPN6Q9Y6Q1 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.66□□□□□ -1.5
CAPN6Q9Y6Q1 AL133173.1-201ENST00000423458 397 ntBASIC5.66□□□□□ -1.5
CAPN6Q9Y6Q1 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.66□□□□□ -1.5
CAPN6Q9Y6Q1 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.66□□□□□ -1.5
CAPN6Q9Y6Q1 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC5.66□□□□□ -1.5
CAPN6Q9Y6Q1 CYCSP51-201ENST00000443545 318 ntBASIC5.66□□□□□ -1.5
CAPN6Q9Y6Q1 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC5.66□□□□□ -1.5
CAPN6Q9Y6Q1 ACA64.1-201ENST00000459171 127 ntBASIC5.66□□□□□ -1.5
CAPN6Q9Y6Q1 AC058823.1-201ENST00000485315 474 ntBASIC5.66□□□□□ -1.5
CAPN6Q9Y6Q1 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC5.66□□□□□ -1.5
CAPN6Q9Y6Q1 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC5.66□□□□□ -1.5
CAPN6Q9Y6Q1 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.66□□□□□ -1.5
CAPN6Q9Y6Q1 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC5.66□□□□□ -1.5
CAPN6Q9Y6Q1 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC5.66□□□□□ -1.5
CAPN6Q9Y6Q1 AC008562.1-201ENST00000521763 330 ntBASIC5.66□□□□□ -1.5
CAPN6Q9Y6Q1 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC5.66□□□□□ -1.5
CAPN6Q9Y6Q1 AF279873.1-201ENST00000523393 313 ntBASIC5.66□□□□□ -1.5
CAPN6Q9Y6Q1 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.66□□□□□ -1.5
CAPN6Q9Y6Q1 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CAPN6Q9Y6Q1 AC034105.3-201ENST00000565294 442 ntBASIC5.66□□□□□ -1.5
CAPN6Q9Y6Q1 AC055876.1-202ENST00000567053 138 ntBASIC5.66□□□□□ -1.5
CAPN6Q9Y6Q1 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.66□□□□□ -1.5
CAPN6Q9Y6Q1 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC5.66□□□□□ -1.5
CAPN6Q9Y6Q1 AC011626.1-201ENST00000604710 562 ntBASIC5.66□□□□□ -1.5
CAPN6Q9Y6Q1 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC5.66□□□□□ -1.5
CAPN6Q9Y6Q1 AL133173.2-201ENST00000614270 90 ntBASIC5.66□□□□□ -1.5
CAPN6Q9Y6Q1 AC129915.3-201ENST00000634128 948 ntBASIC5.66□□□□□ -1.5
CAPN6Q9Y6Q1 AC138649.5-201ENST00000637456 137 ntBASIC5.66□□□□□ -1.5
CAPN6Q9Y6Q1 AC073869.10-201ENST00000642016 354 ntBASIC5.66□□□□□ -1.5
CAPN6Q9Y6Q1 AC107021.2-201ENST00000567714 2095 ntBASIC5.66□□□□□ -1.5
CAPN6Q9Y6Q1 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.66□□□□□ -1.5
CAPN6Q9Y6Q1 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
CAPN6Q9Y6Q1 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CAPN6Q9Y6Q1 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CAPN6Q9Y6Q1 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CAPN6Q9Y6Q1 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
CAPN6Q9Y6Q1 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CAPN6Q9Y6Q1 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.66□□□□□ -1.5
CAPN6Q9Y6Q1 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CAPN6Q9Y6Q1 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CAPN6Q9Y6Q1 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CAPN6Q9Y6Q1 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CAPN6Q9Y6Q1 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
CAPN6Q9Y6Q1 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.65□□□□□ -1.5
CAPN6Q9Y6Q1 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms