Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 ARF4P4-201ENST00000439608 520 ntBASIC4.1□□□□□ -1.75
PCDHGA1Q9Y5H4 RNF2P1-201ENST00000442955 1010 ntBASIC4.1□□□□□ -1.75
PCDHGA1Q9Y5H4 AL590399.6-201ENST00000446396 307 ntBASIC4.1□□□□□ -1.75
PCDHGA1Q9Y5H4 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.1□□□□□ -1.75
PCDHGA1Q9Y5H4 SEPT14P24-201ENST00000447236 180 ntBASIC4.1□□□□□ -1.75
PCDHGA1Q9Y5H4 HSFY5P-201ENST00000453726 309 ntBASIC4.1□□□□□ -1.75
PCDHGA1Q9Y5H4 RPL35AP15-201ENST00000468042 339 ntBASIC4.1□□□□□ -1.75
PCDHGA1Q9Y5H4 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC4.1□□□□□ -1.75
PCDHGA1Q9Y5H4 RPL23AP65-201ENST00000475608 468 ntBASIC4.1□□□□□ -1.75
PCDHGA1Q9Y5H4 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PCDHGA1Q9Y5H4 AC023141.12-201ENST00000512399 199 ntBASIC4.1□□□□□ -1.75
PCDHGA1Q9Y5H4 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.1□□□□□ -1.75
PCDHGA1Q9Y5H4 PAICSP4-201ENST00000517543 1253 ntBASIC4.1□□□□□ -1.75
PCDHGA1Q9Y5H4 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC4.1□□□□□ -1.75
PCDHGA1Q9Y5H4 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.1□□□□□ -1.75
PCDHGA1Q9Y5H4 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.1□□□□□ -1.75
PCDHGA1Q9Y5H4 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PCDHGA1Q9Y5H4 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC4.1□□□□□ -1.75
PCDHGA1Q9Y5H4 RPL21P7-201ENST00000557463 483 ntBASIC4.1□□□□□ -1.75
PCDHGA1Q9Y5H4 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.1□□□□□ -1.75
PCDHGA1Q9Y5H4 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC4.1□□□□□ -1.75
PCDHGA1Q9Y5H4 HSPE1P5-201ENST00000561489 272 ntBASIC4.1□□□□□ -1.75
PCDHGA1Q9Y5H4 MIR5685-201ENST00000579080 79 ntBASIC4.1□□□□□ -1.75
PCDHGA1Q9Y5H4 AC011492.1-201ENST00000600023 315 ntBASIC4.1□□□□□ -1.75
PCDHGA1Q9Y5H4 AL606490.9-201ENST00000603331 271 ntBASIC4.1□□□□□ -1.75
PCDHGA1Q9Y5H4 AC112230.1-201ENST00000604342 547 ntBASIC4.1□□□□□ -1.75
PCDHGA1Q9Y5H4 AL354984.3-201ENST00000604803 325 ntBASIC4.1□□□□□ -1.75
PCDHGA1Q9Y5H4 AP002802.2-201ENST00000605877 235 ntBASIC4.1□□□□□ -1.75
PCDHGA1Q9Y5H4 AC121761.2-201ENST00000617300 689 ntBASIC4.1□□□□□ -1.75
PCDHGA1Q9Y5H4 U73479.1-201ENST00000618062 168 ntBASIC4.1□□□□□ -1.75
PCDHGA1Q9Y5H4 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC4.1□□□□□ -1.75
PCDHGA1Q9Y5H4 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.1□□□□□ -1.75
PCDHGA1Q9Y5H4 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PCDHGA1Q9Y5H4 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
PCDHGA1Q9Y5H4 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
PCDHGA1Q9Y5H4 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PCDHGA1Q9Y5H4 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
PCDHGA1Q9Y5H4 PABPC1P7-201ENST00000413177 1513 ntBASIC4.1□□□□□ -1.75
PCDHGA1Q9Y5H4 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.1□□□□□ -1.75
PCDHGA1Q9Y5H4 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PCDHGA1Q9Y5H4 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PCDHGA1Q9Y5H4 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.09□□□□□ -1.75
PCDHGA1Q9Y5H4 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.09□□□□□ -1.75
PCDHGA1Q9Y5H4 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.09□□□□□ -1.75
PCDHGA1Q9Y5H4 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
PCDHGA1Q9Y5H4 RNA5SP307-201ENST00000362863 116 ntBASIC4.09□□□□□ -1.75
PCDHGA1Q9Y5H4 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.09□□□□□ -1.75
PCDHGA1Q9Y5H4 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.09□□□□□ -1.75
PCDHGA1Q9Y5H4 RNU1-63P-201ENST00000383902 164 ntBASIC4.09□□□□□ -1.75
PCDHGA1Q9Y5H4 MIR195-201ENST00000385194 87 ntBASIC4.09□□□□□ -1.75
PCDHGA1Q9Y5H4 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
PCDHGA1Q9Y5H4 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.09□□□□□ -1.75
PCDHGA1Q9Y5H4 AL583835.1-201ENST00000399570 407 ntBASIC4.09□□□□□ -1.75
PCDHGA1Q9Y5H4 AC097374.1-203ENST00000400783 485 ntBASIC4.09□□□□□ -1.75
PCDHGA1Q9Y5H4 MTCO2P31-201ENST00000402702 684 ntBASIC4.09□□□□□ -1.75
PCDHGA1Q9Y5H4 CRYBB2P1-203ENST00000415709 538 ntBASIC4.09□□□□□ -1.75
PCDHGA1Q9Y5H4 RAC1P3-201ENST00000416129 580 ntBASIC4.09□□□□□ -1.75
PCDHGA1Q9Y5H4 RPS6P14-201ENST00000425165 719 ntBASIC4.09□□□□□ -1.75
PCDHGA1Q9Y5H4 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC4.09□□□□□ -1.75
PCDHGA1Q9Y5H4 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.09□□□□□ -1.75
PCDHGA1Q9Y5H4 AL035246.1-201ENST00000433554 1255 ntBASIC4.09□□□□□ -1.75
PCDHGA1Q9Y5H4 CKS1BP5-201ENST00000434172 273 ntBASIC4.09□□□□□ -1.75
PCDHGA1Q9Y5H4 HMGB1P45-201ENST00000435986 653 ntBASIC4.09□□□□□ -1.75
PCDHGA1Q9Y5H4 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.09□□□□□ -1.75
PCDHGA1Q9Y5H4 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC4.09□□□□□ -1.75
PCDHGA1Q9Y5H4 TVP23BP2-201ENST00000455082 615 ntBASIC4.09□□□□□ -1.75
PCDHGA1Q9Y5H4 ATP5G1P3-201ENST00000463301 410 ntBASIC4.09□□□□□ -1.75
PCDHGA1Q9Y5H4 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.09□□□□□ -1.75
PCDHGA1Q9Y5H4 HMGB1P38-201ENST00000490557 577 ntBASIC4.09□□□□□ -1.75
PCDHGA1Q9Y5H4 RPL5P23-201ENST00000496040 868 ntBASIC4.09□□□□□ -1.75
PCDHGA1Q9Y5H4 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.09□□□□□ -1.75
PCDHGA1Q9Y5H4 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.09□□□□□ -1.75
PCDHGA1Q9Y5H4 AC104057.1-201ENST00000515547 497 ntBASIC4.09□□□□□ -1.75
PCDHGA1Q9Y5H4 CD69-203ENST00000536709 1020 ntTSL 2 BASIC4.09□□□□□ -1.75
PCDHGA1Q9Y5H4 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.09□□□□□ -1.75
PCDHGA1Q9Y5H4 AC006518.2-201ENST00000542513 940 ntBASIC4.09□□□□□ -1.75
PCDHGA1Q9Y5H4 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.09□□□□□ -1.75
PCDHGA1Q9Y5H4 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PCDHGA1Q9Y5H4 AC099785.1-201ENST00000605697 437 ntBASIC4.09□□□□□ -1.75
PCDHGA1Q9Y5H4 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PCDHGA1Q9Y5H4 AC013468.1-201ENST00000608680 598 ntBASIC4.09□□□□□ -1.75
PCDHGA1Q9Y5H4 AF129408.1-201ENST00000608767 431 ntBASIC4.09□□□□□ -1.75
PCDHGA1Q9Y5H4 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
PCDHGA1Q9Y5H4 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.09□□□□□ -1.75
PCDHGA1Q9Y5H4 AL512427.1-201ENST00000618593 349 ntBASIC4.09□□□□□ -1.75
PCDHGA1Q9Y5H4 AC022306.3-201ENST00000619930 550 ntBASIC4.09□□□□□ -1.75
PCDHGA1Q9Y5H4 CR392039.5-201ENST00000623201 510 ntBASIC4.09□□□□□ -1.75
PCDHGA1Q9Y5H4 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.09□□□□□ -1.75
PCDHGA1Q9Y5H4 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
PCDHGA1Q9Y5H4 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
PCDHGA1Q9Y5H4 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.09□□□□□ -1.75
PCDHGA1Q9Y5H4 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.09□□□□□ -1.76
PCDHGA1Q9Y5H4 CASC19-261ENST00000641853 1638 ntBASIC4.09□□□□□ -1.76
PCDHGA1Q9Y5H4 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.09□□□□□ -1.76
PCDHGA1Q9Y5H4 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
PCDHGA1Q9Y5H4 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PCDHGA1Q9Y5H4 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.08□□□□□ -1.76
PCDHGA1Q9Y5H4 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
PCDHGA1Q9Y5H4 MIR208A-201ENST00000362287 71 ntBASIC4.08□□□□□ -1.76
PCDHGA1Q9Y5H4 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms