Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 AC046144.1-201ENST00000478559 1853 ntBASIC4.05□□□□□ -1.76
NCKAP1Q9Y2A7 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
NCKAP1Q9Y2A7 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
NCKAP1Q9Y2A7 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NCKAP1Q9Y2A7 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NCKAP1Q9Y2A7 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
NCKAP1Q9Y2A7 MIR122-201ENST00000385044 85 ntBASIC4.04□□□□□ -1.76
NCKAP1Q9Y2A7 MCTS2P-201ENST00000394552 546 ntBASIC4.04□□□□□ -1.76
NCKAP1Q9Y2A7 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
NCKAP1Q9Y2A7 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.04□□□□□ -1.76
NCKAP1Q9Y2A7 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC4.04□□□□□ -1.76
NCKAP1Q9Y2A7 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC4.04□□□□□ -1.76
NCKAP1Q9Y2A7 ZNF736P7Y-201ENST00000425158 820 ntBASIC4.04□□□□□ -1.76
NCKAP1Q9Y2A7 AL031736.2-201ENST00000426573 787 ntBASIC4.04□□□□□ -1.76
NCKAP1Q9Y2A7 AL009174.1-201ENST00000426577 416 ntBASIC4.04□□□□□ -1.76
NCKAP1Q9Y2A7 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.04□□□□□ -1.76
NCKAP1Q9Y2A7 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.04□□□□□ -1.76
NCKAP1Q9Y2A7 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.04□□□□□ -1.76
NCKAP1Q9Y2A7 HLA-N-201ENST00000437516 135 ntBASIC4.04□□□□□ -1.76
NCKAP1Q9Y2A7 VN1R34P-201ENST00000447387 883 ntBASIC4.04□□□□□ -1.76
NCKAP1Q9Y2A7 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.04□□□□□ -1.76
NCKAP1Q9Y2A7 BX248409.1-201ENST00000455497 255 ntBASIC4.04□□□□□ -1.76
NCKAP1Q9Y2A7 AC096992.1-201ENST00000459808 709 ntBASIC4.04□□□□□ -1.76
NCKAP1Q9Y2A7 RPL7P15-201ENST00000461190 712 ntBASIC4.04□□□□□ -1.76
NCKAP1Q9Y2A7 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NCKAP1Q9Y2A7 AC104982.1-201ENST00000478775 574 ntBASIC4.04□□□□□ -1.76
NCKAP1Q9Y2A7 AC126121.1-201ENST00000482313 553 ntBASIC4.04□□□□□ -1.76
NCKAP1Q9Y2A7 RN7SL271P-201ENST00000487601 295 ntBASIC4.04□□□□□ -1.76
NCKAP1Q9Y2A7 RPS27P23-201ENST00000487608 251 ntBASIC4.04□□□□□ -1.76
NCKAP1Q9Y2A7 SUMO2P5-201ENST00000506790 245 ntBASIC4.04□□□□□ -1.76
NCKAP1Q9Y2A7 IGHV3-32-201ENST00000519182 355 ntBASIC4.04□□□□□ -1.76
NCKAP1Q9Y2A7 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.04□□□□□ -1.76
NCKAP1Q9Y2A7 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.04□□□□□ -1.76
NCKAP1Q9Y2A7 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.04□□□□□ -1.76
NCKAP1Q9Y2A7 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.04□□□□□ -1.76
NCKAP1Q9Y2A7 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.04□□□□□ -1.76
NCKAP1Q9Y2A7 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.04□□□□□ -1.76
NCKAP1Q9Y2A7 YWHAZP1-201ENST00000556286 722 ntBASIC4.04□□□□□ -1.76
NCKAP1Q9Y2A7 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.04□□□□□ -1.76
NCKAP1Q9Y2A7 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC4.04□□□□□ -1.76
NCKAP1Q9Y2A7 CYP4A43P-201ENST00000568156 121 ntBASIC4.04□□□□□ -1.76
NCKAP1Q9Y2A7 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.04□□□□□ -1.76
NCKAP1Q9Y2A7 NF1P5-201ENST00000588287 448 ntBASIC4.04□□□□□ -1.76
NCKAP1Q9Y2A7 AL606834.3-201ENST00000602615 496 ntBASIC4.04□□□□□ -1.76
NCKAP1Q9Y2A7 AC069304.3-201ENST00000603938 1084 ntBASIC4.04□□□□□ -1.76
NCKAP1Q9Y2A7 AC097504.2-201ENST00000608088 454 ntBASIC4.04□□□□□ -1.76
NCKAP1Q9Y2A7 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NCKAP1Q9Y2A7 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.04□□□□□ -1.76
NCKAP1Q9Y2A7 AL590396.4-201ENST00000636779 956 ntBASIC4.04□□□□□ -1.76
NCKAP1Q9Y2A7 AC099654.8-201ENST00000637757 681 ntBASIC4.04□□□□□ -1.76
NCKAP1Q9Y2A7 AC139713.2-210ENST00000641741 992 ntBASIC4.04□□□□□ -1.76
NCKAP1Q9Y2A7 MTCO1P14-201ENST00000441695 1559 ntBASIC4.04□□□□□ -1.76
NCKAP1Q9Y2A7 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.04□□□□□ -1.76
NCKAP1Q9Y2A7 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.04□□□□□ -1.76
NCKAP1Q9Y2A7 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
NCKAP1Q9Y2A7 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
NCKAP1Q9Y2A7 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.03□□□□□ -1.76
NCKAP1Q9Y2A7 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NCKAP1Q9Y2A7 AC025263.3-201ENST00000622965 1396 ntBASIC4.03□□□□□ -1.76
NCKAP1Q9Y2A7 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.03□□□□□ -1.76
NCKAP1Q9Y2A7 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NCKAP1Q9Y2A7 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.03□□□□□ -1.76
NCKAP1Q9Y2A7 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.03□□□□□ -1.76
NCKAP1Q9Y2A7 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.03□□□□□ -1.76
NCKAP1Q9Y2A7 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.03□□□□□ -1.76
NCKAP1Q9Y2A7 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.03□□□□□ -1.76
NCKAP1Q9Y2A7 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NCKAP1Q9Y2A7 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NCKAP1Q9Y2A7 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NCKAP1Q9Y2A7 XIAPP3-201ENST00000312918 795 ntBASIC4.03□□□□□ -1.76
NCKAP1Q9Y2A7 U3.15-201ENST00000365398 212 ntBASIC4.03□□□□□ -1.76
NCKAP1Q9Y2A7 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.03□□□□□ -1.76
NCKAP1Q9Y2A7 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NCKAP1Q9Y2A7 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.03□□□□□ -1.76
NCKAP1Q9Y2A7 RNU6-213P-201ENST00000384051 104 ntBASIC4.03□□□□□ -1.76
NCKAP1Q9Y2A7 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
NCKAP1Q9Y2A7 RSL24D1P1-201ENST00000404972 493 ntBASIC4.03□□□□□ -1.76
NCKAP1Q9Y2A7 SNORA57.3-201ENST00000411095 141 ntBASIC4.03□□□□□ -1.76
NCKAP1Q9Y2A7 PGBD4P8-201ENST00000412993 562 ntBASIC4.03□□□□□ -1.76
NCKAP1Q9Y2A7 RAC1P3-201ENST00000416129 580 ntBASIC4.03□□□□□ -1.76
NCKAP1Q9Y2A7 AC027644.1-201ENST00000419595 298 ntBASIC4.03□□□□□ -1.76
NCKAP1Q9Y2A7 USP9YP21-201ENST00000420603 432 ntBASIC4.03□□□□□ -1.76
NCKAP1Q9Y2A7 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.03□□□□□ -1.76
NCKAP1Q9Y2A7 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.03□□□□□ -1.76
NCKAP1Q9Y2A7 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.03□□□□□ -1.76
NCKAP1Q9Y2A7 AC002542.1-201ENST00000440683 193 ntBASIC4.03□□□□□ -1.76
NCKAP1Q9Y2A7 OR9M1P-201ENST00000459641 921 ntBASIC4.03□□□□□ -1.76
NCKAP1Q9Y2A7 AC008885.2-201ENST00000509506 930 ntBASIC4.03□□□□□ -1.76
NCKAP1Q9Y2A7 KRT19P6-201ENST00000510983 209 ntBASIC4.03□□□□□ -1.76
NCKAP1Q9Y2A7 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.03□□□□□ -1.76
NCKAP1Q9Y2A7 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.03□□□□□ -1.76
NCKAP1Q9Y2A7 CYCSP30-201ENST00000546447 172 ntBASIC4.03□□□□□ -1.76
NCKAP1Q9Y2A7 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.03□□□□□ -1.76
NCKAP1Q9Y2A7 VN1R87P-201ENST00000596706 487 ntBASIC4.03□□□□□ -1.76
NCKAP1Q9Y2A7 AC068790.5-201ENST00000602741 355 ntBASIC4.03□□□□□ -1.76
NCKAP1Q9Y2A7 AC011458.1-201ENST00000604034 617 ntBASIC4.03□□□□□ -1.76
NCKAP1Q9Y2A7 AC112230.1-201ENST00000604342 547 ntBASIC4.03□□□□□ -1.76
NCKAP1Q9Y2A7 AL158050.2-201ENST00000605336 568 ntBASIC4.03□□□□□ -1.76
NCKAP1Q9Y2A7 AC104763.3-201ENST00000613765 618 ntBASIC4.03□□□□□ -1.76
NCKAP1Q9Y2A7 AC243756.2-201ENST00000618406 463 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms