Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.36□□□□□ -1.71
SIX4Q9UIU6 AC078883.4-201ENST00000623218 367 ntBASIC4.36□□□□□ -1.71
SIX4Q9UIU6 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.36□□□□□ -1.71
SIX4Q9UIU6 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SIX4Q9UIU6 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
SIX4Q9UIU6 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SIX4Q9UIU6 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SIX4Q9UIU6 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC4.36□□□□□ -1.71
SIX4Q9UIU6 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SIX4Q9UIU6 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
SIX4Q9UIU6 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SIX4Q9UIU6 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
SIX4Q9UIU6 SNORA60-201ENST00000362396 134 ntBASIC4.35□□□□□ -1.71
SIX4Q9UIU6 RNU6-1339P-201ENST00000363574 91 ntBASIC4.35□□□□□ -1.71
SIX4Q9UIU6 RN7SKP227-201ENST00000364445 330 ntBASIC4.35□□□□□ -1.71
SIX4Q9UIU6 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
SIX4Q9UIU6 RNU6-413P-201ENST00000384115 107 ntBASIC4.35□□□□□ -1.71
SIX4Q9UIU6 RNU6-225P-201ENST00000384613 103 ntBASIC4.35□□□□□ -1.71
SIX4Q9UIU6 MIR525-201ENST00000384978 85 ntBASIC4.35□□□□□ -1.71
SIX4Q9UIU6 PPIAP31-201ENST00000405422 495 ntBASIC4.35□□□□□ -1.71
SIX4Q9UIU6 RNU4-6P-201ENST00000410804 122 ntBASIC4.35□□□□□ -1.71
SIX4Q9UIU6 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.35□□□□□ -1.71
SIX4Q9UIU6 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.35□□□□□ -1.71
SIX4Q9UIU6 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.35□□□□□ -1.71
SIX4Q9UIU6 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.35□□□□□ -1.71
SIX4Q9UIU6 OR5BE1P-201ENST00000425977 939 ntBASIC4.35□□□□□ -1.71
SIX4Q9UIU6 OR5AW1P-201ENST00000426334 1006 ntBASIC4.35□□□□□ -1.71
SIX4Q9UIU6 TXNL1P1-201ENST00000429528 554 ntBASIC4.35□□□□□ -1.71
SIX4Q9UIU6 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.35□□□□□ -1.71
SIX4Q9UIU6 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.35□□□□□ -1.71
SIX4Q9UIU6 EXTL2P1-201ENST00000446218 416 ntBASIC4.35□□□□□ -1.71
SIX4Q9UIU6 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC4.35□□□□□ -1.71
SIX4Q9UIU6 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.35□□□□□ -1.71
SIX4Q9UIU6 AL162151.2-201ENST00000448875 158 ntBASIC4.35□□□□□ -1.71
SIX4Q9UIU6 ART2BP-201ENST00000453501 499 ntBASIC4.35□□□□□ -1.71
SIX4Q9UIU6 NECAP1P2-201ENST00000455668 727 ntBASIC4.35□□□□□ -1.71
SIX4Q9UIU6 TRBV8-2-201ENST00000475637 270 ntBASIC4.35□□□□□ -1.71
SIX4Q9UIU6 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.35□□□□□ -1.71
SIX4Q9UIU6 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC4.35□□□□□ -1.71
SIX4Q9UIU6 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.35□□□□□ -1.71
SIX4Q9UIU6 HMGB1P23-201ENST00000518743 568 ntBASIC4.35□□□□□ -1.71
SIX4Q9UIU6 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.35□□□□□ -1.71
SIX4Q9UIU6 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.35□□□□□ -1.71
SIX4Q9UIU6 AC124293.1-201ENST00000530034 493 ntBASIC4.35□□□□□ -1.71
SIX4Q9UIU6 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SIX4Q9UIU6 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.35□□□□□ -1.71
SIX4Q9UIU6 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.35□□□□□ -1.71
SIX4Q9UIU6 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.35□□□□□ -1.71
SIX4Q9UIU6 POLR2KP1-201ENST00000553226 168 ntBASIC4.35□□□□□ -1.71
SIX4Q9UIU6 MTCYBP27-201ENST00000555160 670 ntBASIC4.35□□□□□ -1.71
SIX4Q9UIU6 AC044913.1-201ENST00000557200 430 ntBASIC4.35□□□□□ -1.71
SIX4Q9UIU6 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.35□□□□□ -1.71
SIX4Q9UIU6 AADACP1-206ENST00000561502 1193 ntBASIC4.35□□□□□ -1.71
SIX4Q9UIU6 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.35□□□□□ -1.71
SIX4Q9UIU6 AC055764.2-201ENST00000610089 670 ntBASIC4.35□□□□□ -1.71
SIX4Q9UIU6 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.35□□□□□ -1.71
SIX4Q9UIU6 OR5BE1P-202ENST00000641168 1176 ntBASIC4.35□□□□□ -1.71
SIX4Q9UIU6 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.35□□□□□ -1.71
SIX4Q9UIU6 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
SIX4Q9UIU6 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.35□□□□□ -1.71
SIX4Q9UIU6 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SIX4Q9UIU6 AC007390.2-201ENST00000606229 3803 ntBASIC4.35□□□□□ -1.71
SIX4Q9UIU6 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
SIX4Q9UIU6 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
SIX4Q9UIU6 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.35□□□□□ -1.71
SIX4Q9UIU6 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SIX4Q9UIU6 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
SIX4Q9UIU6 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
SIX4Q9UIU6 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SIX4Q9UIU6 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SIX4Q9UIU6 OR52B1P-201ENST00000316506 909 ntBASIC4.34□□□□□ -1.71
SIX4Q9UIU6 NACA3P-201ENST00000359690 648 ntBASIC4.34□□□□□ -1.71
SIX4Q9UIU6 RNA5SP388-201ENST00000362584 119 ntBASIC4.34□□□□□ -1.71
SIX4Q9UIU6 SNORD113-6-201ENST00000363345 75 ntBASIC4.34□□□□□ -1.71
SIX4Q9UIU6 SNORD35B-201ENST00000363660 87 ntBASIC4.34□□□□□ -1.71
SIX4Q9UIU6 snoZ40.1-201ENST00000364540 72 ntBASIC4.34□□□□□ -1.71
SIX4Q9UIU6 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.34□□□□□ -1.71
SIX4Q9UIU6 SNORD116-8-201ENST00000384365 95 ntBASIC4.34□□□□□ -1.71
SIX4Q9UIU6 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.34□□□□□ -1.71
SIX4Q9UIU6 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.34□□□□□ -1.71
SIX4Q9UIU6 MTND2P18-201ENST00000419962 1030 ntBASIC4.34□□□□□ -1.71
SIX4Q9UIU6 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC4.34□□□□□ -1.71
SIX4Q9UIU6 VDAC1P6-201ENST00000430062 855 ntBASIC4.34□□□□□ -1.71
SIX4Q9UIU6 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
SIX4Q9UIU6 RPS20P1-201ENST00000434853 354 ntBASIC4.34□□□□□ -1.71
SIX4Q9UIU6 RPL21P89-201ENST00000444021 467 ntBASIC4.34□□□□□ -1.71
SIX4Q9UIU6 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC4.34□□□□□ -1.71
SIX4Q9UIU6 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC4.34□□□□□ -1.71
SIX4Q9UIU6 AC073522.1-201ENST00000483312 377 ntBASIC4.34□□□□□ -1.71
SIX4Q9UIU6 AC113347.3-201ENST00000509113 148 ntBASIC4.34□□□□□ -1.71
SIX4Q9UIU6 AC118465.1-201ENST00000513820 1271 ntBASIC4.34□□□□□ -1.71
SIX4Q9UIU6 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.34□□□□□ -1.71
SIX4Q9UIU6 MIR2116-201ENST00000517221 80 ntBASIC4.34□□□□□ -1.71
SIX4Q9UIU6 AC023632.1-201ENST00000518463 375 ntBASIC4.34□□□□□ -1.71
SIX4Q9UIU6 AC134698.5-201ENST00000519444 336 ntBASIC4.34□□□□□ -1.71
SIX4Q9UIU6 IGJP1-201ENST00000522682 475 ntBASIC4.34□□□□□ -1.71
SIX4Q9UIU6 TOMM20P2-201ENST00000540082 421 ntBASIC4.34□□□□□ -1.71
SIX4Q9UIU6 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.34□□□□□ -1.71
SIX4Q9UIU6 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.34□□□□□ -1.71
SIX4Q9UIU6 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms