Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
CCM2LQ9NUG4 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CCM2LQ9NUG4 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
CCM2LQ9NUG4 AC005294.1-201ENST00000355509 281 ntBASIC5□□□□□ -1.61
CCM2LQ9NUG4 Y_RNA.6-201ENST00000362350 114 ntBASIC5□□□□□ -1.61
CCM2LQ9NUG4 RNU6-517P-201ENST00000384362 110 ntBASIC5□□□□□ -1.61
CCM2LQ9NUG4 RNU6-769P-201ENST00000384407 104 ntBASIC5□□□□□ -1.61
CCM2LQ9NUG4 RNU6-809P-201ENST00000384461 107 ntBASIC5□□□□□ -1.61
CCM2LQ9NUG4 SNORA40.3-201ENST00000390964 122 ntBASIC5□□□□□ -1.61
CCM2LQ9NUG4 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
CCM2LQ9NUG4 MIR1271-201ENST00000408537 86 ntBASIC5□□□□□ -1.61
CCM2LQ9NUG4 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC5□□□□□ -1.61
CCM2LQ9NUG4 MTCO1P17-201ENST00000411522 491 ntBASIC5□□□□□ -1.61
CCM2LQ9NUG4 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5□□□□□ -1.61
CCM2LQ9NUG4 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5□□□□□ -1.61
CCM2LQ9NUG4 USP9YP13-201ENST00000417797 480 ntBASIC5□□□□□ -1.61
CCM2LQ9NUG4 AIMP1P1-201ENST00000418670 937 ntBASIC5□□□□□ -1.61
CCM2LQ9NUG4 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5□□□□□ -1.61
CCM2LQ9NUG4 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC5□□□□□ -1.61
CCM2LQ9NUG4 AL590762.4-201ENST00000425885 253 ntBASIC5□□□□□ -1.61
CCM2LQ9NUG4 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5□□□□□ -1.61
CCM2LQ9NUG4 RPL35AP21-201ENST00000437667 333 ntBASIC5□□□□□ -1.61
CCM2LQ9NUG4 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5□□□□□ -1.61
CCM2LQ9NUG4 CNOT7P2-201ENST00000441051 832 ntBASIC5□□□□□ -1.61
CCM2LQ9NUG4 HSPE1P28-201ENST00000443139 211 ntBASIC5□□□□□ -1.61
CCM2LQ9NUG4 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC5□□□□□ -1.61
CCM2LQ9NUG4 AL033528.1-201ENST00000453780 140 ntBASIC5□□□□□ -1.61
CCM2LQ9NUG4 NDUFAF4P4-201ENST00000454883 502 ntBASIC5□□□□□ -1.61
CCM2LQ9NUG4 AC092754.1-201ENST00000472975 479 ntBASIC5□□□□□ -1.61
CCM2LQ9NUG4 HMGB1P21-201ENST00000502313 581 ntBASIC5□□□□□ -1.61
CCM2LQ9NUG4 AC138853.1-201ENST00000503549 823 ntBASIC5□□□□□ -1.61
CCM2LQ9NUG4 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC5□□□□□ -1.61
CCM2LQ9NUG4 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC5□□□□□ -1.61
CCM2LQ9NUG4 AC024558.1-201ENST00000505008 528 ntBASIC5□□□□□ -1.61
CCM2LQ9NUG4 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC5□□□□□ -1.61
CCM2LQ9NUG4 MTND2P33-201ENST00000506452 1031 ntBASIC5□□□□□ -1.61
CCM2LQ9NUG4 HMGB3P16-201ENST00000508037 287 ntBASIC5□□□□□ -1.61
CCM2LQ9NUG4 AC034159.1-201ENST00000513885 583 ntBASIC5□□□□□ -1.61
CCM2LQ9NUG4 AL671862.1-201ENST00000515851 349 ntBASIC5□□□□□ -1.61
CCM2LQ9NUG4 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5□□□□□ -1.61
CCM2LQ9NUG4 MAL2-203ENST00000534619 578 ntTSL 4 BASIC5□□□□□ -1.61
CCM2LQ9NUG4 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC5□□□□□ -1.61
CCM2LQ9NUG4 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC5□□□□□ -1.61
CCM2LQ9NUG4 AC007566.2-201ENST00000603642 413 ntBASIC5□□□□□ -1.61
CCM2LQ9NUG4 AC011626.1-201ENST00000604710 562 ntBASIC5□□□□□ -1.61
CCM2LQ9NUG4 AC018695.5-201ENST00000605872 315 ntBASIC5□□□□□ -1.61
CCM2LQ9NUG4 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC5□□□□□ -1.61
CCM2LQ9NUG4 AC131902.3-201ENST00000611767 581 ntBASIC5□□□□□ -1.61
CCM2LQ9NUG4 AL121612.2-201ENST00000612261 482 ntBASIC5□□□□□ -1.61
CCM2LQ9NUG4 MIR8080-201ENST00000622224 89 ntBASIC5□□□□□ -1.61
CCM2LQ9NUG4 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
CCM2LQ9NUG4 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5□□□□□ -1.61
CCM2LQ9NUG4 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
CCM2LQ9NUG4 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5□□□□□ -1.61
CCM2LQ9NUG4 Z95327.2-201ENST00000414579 1873 ntBASIC5□□□□□ -1.61
CCM2LQ9NUG4 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
CCM2LQ9NUG4 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5□□□□□ -1.61
CCM2LQ9NUG4 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5□□□□□ -1.61
CCM2LQ9NUG4 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5□□□□□ -1.61
CCM2LQ9NUG4 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.99□□□□□ -1.61
CCM2LQ9NUG4 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCM2LQ9NUG4 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
CCM2LQ9NUG4 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCM2LQ9NUG4 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CCM2LQ9NUG4 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.99□□□□□ -1.61
CCM2LQ9NUG4 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC4.99□□□□□ -1.61
CCM2LQ9NUG4 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.99□□□□□ -1.61
CCM2LQ9NUG4 SRRM1P3-201ENST00000426911 2678 ntBASIC4.99□□□□□ -1.61
CCM2LQ9NUG4 AC097714.1-201ENST00000511272 1647 ntBASIC4.99□□□□□ -1.61
CCM2LQ9NUG4 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CCM2LQ9NUG4 RNA5SP131-201ENST00000365452 119 ntBASIC4.99□□□□□ -1.61
CCM2LQ9NUG4 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.99□□□□□ -1.61
CCM2LQ9NUG4 RNU6-533P-201ENST00000384144 107 ntBASIC4.99□□□□□ -1.61
CCM2LQ9NUG4 MIR589-201ENST00000385238 99 ntBASIC4.99□□□□□ -1.61
CCM2LQ9NUG4 MIR550A3-201ENST00000390735 95 ntBASIC4.99□□□□□ -1.61
CCM2LQ9NUG4 SNORA68.2-201ENST00000391263 128 ntBASIC4.99□□□□□ -1.61
CCM2LQ9NUG4 BTBD10P2-201ENST00000404779 676 ntBASIC4.99□□□□□ -1.61
CCM2LQ9NUG4 AL035410.1-201ENST00000427409 427 ntBASIC4.99□□□□□ -1.61
CCM2LQ9NUG4 AC008065.1-201ENST00000428525 348 ntBASIC4.99□□□□□ -1.61
CCM2LQ9NUG4 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC4.99□□□□□ -1.61
CCM2LQ9NUG4 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.99□□□□□ -1.61
CCM2LQ9NUG4 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC4.99□□□□□ -1.61
CCM2LQ9NUG4 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.99□□□□□ -1.61
CCM2LQ9NUG4 RPL35AP28-201ENST00000459730 331 ntBASIC4.99□□□□□ -1.61
CCM2LQ9NUG4 KLF3P2-201ENST00000465138 268 ntBASIC4.99□□□□□ -1.61
CCM2LQ9NUG4 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CCM2LQ9NUG4 OARD1-211ENST00000480585 829 ntTSL 3 BASIC4.99□□□□□ -1.61
CCM2LQ9NUG4 AC096751.1-202ENST00000502691 1067 ntBASIC4.99□□□□□ -1.61
CCM2LQ9NUG4 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.99□□□□□ -1.61
CCM2LQ9NUG4 AC105031.1-201ENST00000518550 476 ntBASIC4.99□□□□□ -1.61
CCM2LQ9NUG4 MRPS16P1-201ENST00000523462 412 ntBASIC4.99□□□□□ -1.61
CCM2LQ9NUG4 AC107918.3-201ENST00000533272 382 ntBASIC4.99□□□□□ -1.61
CCM2LQ9NUG4 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.99□□□□□ -1.61
CCM2LQ9NUG4 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.99□□□□□ -1.61
CCM2LQ9NUG4 NTS-203ENST00000551529 801 ntTSL 3 BASIC4.99□□□□□ -1.61
CCM2LQ9NUG4 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.99□□□□□ -1.61
CCM2LQ9NUG4 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CCM2LQ9NUG4 AC015720.2-201ENST00000567709 334 ntBASIC4.99□□□□□ -1.61
CCM2LQ9NUG4 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.99□□□□□ -1.61
CCM2LQ9NUG4 MIR4528-201ENST00000577763 90 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms