Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 PSMB7P1-201ENST00000556349 514 ntBASIC4.32□□□□□ -1.72
PCDH9Q9HC56 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.32□□□□□ -1.72
PCDH9Q9HC56 AC007599.1-201ENST00000568688 1174 ntBASIC4.32□□□□□ -1.72
PCDH9Q9HC56 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC4.32□□□□□ -1.72
PCDH9Q9HC56 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.32□□□□□ -1.72
PCDH9Q9HC56 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.32□□□□□ -1.72
PCDH9Q9HC56 AC000123.2-201ENST00000623124 461 ntBASIC4.32□□□□□ -1.72
PCDH9Q9HC56 AC009039.2-201ENST00000624524 529 ntBASIC4.32□□□□□ -1.72
PCDH9Q9HC56 AC016717.3-201ENST00000624730 554 ntBASIC4.32□□□□□ -1.72
PCDH9Q9HC56 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
PCDH9Q9HC56 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PCDH9Q9HC56 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
PCDH9Q9HC56 ZNF962P-201ENST00000443465 3140 ntBASIC4.32□□□□□ -1.72
PCDH9Q9HC56 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PCDH9Q9HC56 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PCDH9Q9HC56 AC012321.1-201ENST00000561622 1588 ntBASIC4.31□□□□□ -1.72
PCDH9Q9HC56 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PCDH9Q9HC56 AC006042.3-201ENST00000454684 1469 ntBASIC4.31□□□□□ -1.72
PCDH9Q9HC56 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PCDH9Q9HC56 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PCDH9Q9HC56 DCAF13P3-201ENST00000561147 1334 ntBASIC4.31□□□□□ -1.72
PCDH9Q9HC56 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
PCDH9Q9HC56 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PCDH9Q9HC56 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
PCDH9Q9HC56 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PCDH9Q9HC56 RNU1-14P-201ENST00000362759 152 ntBASIC4.31□□□□□ -1.72
PCDH9Q9HC56 Y_RNA.169-201ENST00000363745 96 ntBASIC4.31□□□□□ -1.72
PCDH9Q9HC56 RNU1-132P-201ENST00000364300 164 ntBASIC4.31□□□□□ -1.72
PCDH9Q9HC56 RNU6-707P-201ENST00000364647 95 ntBASIC4.31□□□□□ -1.72
PCDH9Q9HC56 RNU6-304P-201ENST00000364855 107 ntBASIC4.31□□□□□ -1.72
PCDH9Q9HC56 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
PCDH9Q9HC56 Y_RNA.465-201ENST00000384293 102 ntBASIC4.31□□□□□ -1.72
PCDH9Q9HC56 SNORA37-201ENST00000384504 129 ntBASIC4.31□□□□□ -1.72
PCDH9Q9HC56 RNU6-83P-201ENST00000384568 112 ntBASIC4.31□□□□□ -1.72
PCDH9Q9HC56 AL049545.1-201ENST00000401856 572 ntBASIC4.31□□□□□ -1.72
PCDH9Q9HC56 RPL23AP48-201ENST00000406913 488 ntBASIC4.31□□□□□ -1.72
PCDH9Q9HC56 RNA5SP36-201ENST00000410197 133 ntBASIC4.31□□□□□ -1.72
PCDH9Q9HC56 RN7SKP235-201ENST00000410662 305 ntBASIC4.31□□□□□ -1.72
PCDH9Q9HC56 AC016397.1-201ENST00000412463 242 ntBASIC4.31□□□□□ -1.72
PCDH9Q9HC56 GTF2IP23-201ENST00000423746 351 ntBASIC4.31□□□□□ -1.72
PCDH9Q9HC56 AL138785.1-201ENST00000425821 331 ntBASIC4.31□□□□□ -1.72
PCDH9Q9HC56 MTCO1P3-201ENST00000429327 192 ntBASIC4.31□□□□□ -1.72
PCDH9Q9HC56 AC016712.1-201ENST00000431088 378 ntBASIC4.31□□□□□ -1.72
PCDH9Q9HC56 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.31□□□□□ -1.72
PCDH9Q9HC56 COX7BP2-201ENST00000437976 242 ntBASIC4.31□□□□□ -1.72
PCDH9Q9HC56 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.31□□□□□ -1.72
PCDH9Q9HC56 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC4.31□□□□□ -1.72
PCDH9Q9HC56 H2AFZP6-201ENST00000444403 394 ntBASIC4.31□□□□□ -1.72
PCDH9Q9HC56 EXTL2P1-201ENST00000446218 416 ntBASIC4.31□□□□□ -1.72
PCDH9Q9HC56 EEF1A1P1-201ENST00000447052 739 ntBASIC4.31□□□□□ -1.72
PCDH9Q9HC56 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
PCDH9Q9HC56 AL451050.1-201ENST00000450126 415 ntBASIC4.31□□□□□ -1.72
PCDH9Q9HC56 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.31□□□□□ -1.72
PCDH9Q9HC56 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC4.31□□□□□ -1.72
PCDH9Q9HC56 RPL23AP71-201ENST00000470966 469 ntBASIC4.31□□□□□ -1.72
PCDH9Q9HC56 RPS26P15-201ENST00000488067 348 ntBASIC4.31□□□□□ -1.72
PCDH9Q9HC56 RN7SL691P-201ENST00000494487 301 ntBASIC4.31□□□□□ -1.72
PCDH9Q9HC56 RNA5SP49-201ENST00000516450 115 ntBASIC4.31□□□□□ -1.72
PCDH9Q9HC56 RNU6-347P-201ENST00000516658 105 ntBASIC4.31□□□□□ -1.72
PCDH9Q9HC56 RN7SKP283-201ENST00000517197 270 ntBASIC4.31□□□□□ -1.72
PCDH9Q9HC56 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC4.31□□□□□ -1.72
PCDH9Q9HC56 AC007834.2-201ENST00000536310 343 ntBASIC4.31□□□□□ -1.72
PCDH9Q9HC56 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.31□□□□□ -1.72
PCDH9Q9HC56 MIR3912-201ENST00000577566 105 ntBASIC4.31□□□□□ -1.72
PCDH9Q9HC56 AC022662.1-201ENST00000580252 331 ntBASIC4.31□□□□□ -1.72
PCDH9Q9HC56 AC090312.2-201ENST00000582687 378 ntBASIC4.31□□□□□ -1.72
PCDH9Q9HC56 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC4.31□□□□□ -1.72
PCDH9Q9HC56 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.31□□□□□ -1.72
PCDH9Q9HC56 OR6R2P-201ENST00000609216 300 ntBASIC4.31□□□□□ -1.72
PCDH9Q9HC56 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.31□□□□□ -1.72
PCDH9Q9HC56 AC114781.5-201ENST00000615297 108 ntBASIC4.31□□□□□ -1.72
PCDH9Q9HC56 AP000843.1-201ENST00000624880 701 ntBASIC4.31□□□□□ -1.72
PCDH9Q9HC56 AP005264.7-201ENST00000625003 745 ntBASIC4.31□□□□□ -1.72
PCDH9Q9HC56 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.31□□□□□ -1.72
PCDH9Q9HC56 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
PCDH9Q9HC56 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PCDH9Q9HC56 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
PCDH9Q9HC56 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PCDH9Q9HC56 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.31□□□□□ -1.72
PCDH9Q9HC56 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PCDH9Q9HC56 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.31□□□□□ -1.72
PCDH9Q9HC56 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.31□□□□□ -1.72
PCDH9Q9HC56 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
PCDH9Q9HC56 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.3□□□□□ -1.72
PCDH9Q9HC56 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PCDH9Q9HC56 AC009951.1-201ENST00000623674 2614 ntBASIC4.3□□□□□ -1.72
PCDH9Q9HC56 AP005901.5-201ENST00000545779 1796 ntBASIC4.3□□□□□ -1.72
PCDH9Q9HC56 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
PCDH9Q9HC56 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PCDH9Q9HC56 SNORD116-2-201ENST00000384274 95 ntBASIC4.3□□□□□ -1.72
PCDH9Q9HC56 SNORD116-6-201ENST00000384711 96 ntBASIC4.3□□□□□ -1.72
PCDH9Q9HC56 SNORA3C-201ENST00000408792 125 ntBASIC4.3□□□□□ -1.72
PCDH9Q9HC56 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.3□□□□□ -1.72
PCDH9Q9HC56 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC4.3□□□□□ -1.72
PCDH9Q9HC56 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.3□□□□□ -1.72
PCDH9Q9HC56 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.3□□□□□ -1.72
PCDH9Q9HC56 AC073069.1-201ENST00000428657 441 ntBASIC4.3□□□□□ -1.72
PCDH9Q9HC56 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
PCDH9Q9HC56 HMGB1P48-201ENST00000446155 598 ntBASIC4.3□□□□□ -1.72
PCDH9Q9HC56 AC104306.1-201ENST00000449702 371 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms