Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
BRF2Q9HAW0 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC4.32□□□□□ -1.72
BRF2Q9HAW0 CASC16-202ENST00000563844 610 ntTSL 3 BASIC4.32□□□□□ -1.72
BRF2Q9HAW0 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.32□□□□□ -1.72
BRF2Q9HAW0 VN1R82P-201ENST00000601481 356 ntBASIC4.32□□□□□ -1.72
BRF2Q9HAW0 AL031281.1-201ENST00000604049 488 ntBASIC4.32□□□□□ -1.72
BRF2Q9HAW0 AL353600.1-201ENST00000608148 251 ntBASIC4.32□□□□□ -1.72
BRF2Q9HAW0 AP001521.1-201ENST00000609150 300 ntBASIC4.32□□□□□ -1.72
BRF2Q9HAW0 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.32□□□□□ -1.72
BRF2Q9HAW0 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
BRF2Q9HAW0 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC4.32□□□□□ -1.72
BRF2Q9HAW0 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.32□□□□□ -1.72
BRF2Q9HAW0 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
BRF2Q9HAW0 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
BRF2Q9HAW0 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
BRF2Q9HAW0 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.32□□□□□ -1.72
BRF2Q9HAW0 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
BRF2Q9HAW0 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.32□□□□□ -1.72
BRF2Q9HAW0 A2MP1-204ENST00000566278 4130 ntBASIC4.31□□□□□ -1.72
BRF2Q9HAW0 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
BRF2Q9HAW0 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
BRF2Q9HAW0 AL390862.1-201ENST00000635467 1469 ntBASIC4.31□□□□□ -1.72
BRF2Q9HAW0 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
BRF2Q9HAW0 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
BRF2Q9HAW0 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.31□□□□□ -1.72
BRF2Q9HAW0 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
BRF2Q9HAW0 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
BRF2Q9HAW0 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
BRF2Q9HAW0 RNU6-657P-201ENST00000383904 107 ntBASIC4.31□□□□□ -1.72
BRF2Q9HAW0 Y_RNA.408-201ENST00000383987 102 ntBASIC4.31□□□□□ -1.72
BRF2Q9HAW0 RNU6-757P-201ENST00000410334 100 ntBASIC4.31□□□□□ -1.72
BRF2Q9HAW0 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC4.31□□□□□ -1.72
BRF2Q9HAW0 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.31□□□□□ -1.72
BRF2Q9HAW0 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC4.31□□□□□ -1.72
BRF2Q9HAW0 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.31□□□□□ -1.72
BRF2Q9HAW0 AC004690.1-201ENST00000418216 328 ntBASIC4.31□□□□□ -1.72
BRF2Q9HAW0 OFD1P18Y-201ENST00000420889 959 ntBASIC4.31□□□□□ -1.72
BRF2Q9HAW0 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.31□□□□□ -1.72
BRF2Q9HAW0 CENPIP1-201ENST00000425713 902 ntBASIC4.31□□□□□ -1.72
BRF2Q9HAW0 AL049745.1-201ENST00000433953 286 ntBASIC4.31□□□□□ -1.72
BRF2Q9HAW0 RPL12P3-201ENST00000440080 396 ntBASIC4.31□□□□□ -1.72
BRF2Q9HAW0 RPL23AP93-201ENST00000440847 484 ntBASIC4.31□□□□□ -1.72
BRF2Q9HAW0 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.31□□□□□ -1.72
BRF2Q9HAW0 AC104978.1-201ENST00000449387 391 ntBASIC4.31□□□□□ -1.72
BRF2Q9HAW0 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.31□□□□□ -1.72
BRF2Q9HAW0 AC004263.1-201ENST00000479327 332 ntBASIC4.31□□□□□ -1.72
BRF2Q9HAW0 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.31□□□□□ -1.72
BRF2Q9HAW0 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.31□□□□□ -1.72
BRF2Q9HAW0 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC4.31□□□□□ -1.72
BRF2Q9HAW0 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC4.31□□□□□ -1.72
BRF2Q9HAW0 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC4.31□□□□□ -1.72
BRF2Q9HAW0 AC005798.1-201ENST00000513715 387 ntBASIC4.31□□□□□ -1.72
BRF2Q9HAW0 RNU4-60P-201ENST00000517239 135 ntBASIC4.31□□□□□ -1.72
BRF2Q9HAW0 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.31□□□□□ -1.72
BRF2Q9HAW0 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.31□□□□□ -1.72
BRF2Q9HAW0 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC4.31□□□□□ -1.72
BRF2Q9HAW0 AC100770.1-201ENST00000532310 322 ntBASIC4.31□□□□□ -1.72
BRF2Q9HAW0 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.31□□□□□ -1.72
BRF2Q9HAW0 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.31□□□□□ -1.72
BRF2Q9HAW0 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC4.31□□□□□ -1.72
BRF2Q9HAW0 AC005412.1-201ENST00000580812 1049 ntBASIC4.31□□□□□ -1.72
BRF2Q9HAW0 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.31□□□□□ -1.72
BRF2Q9HAW0 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.31□□□□□ -1.72
BRF2Q9HAW0 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.31□□□□□ -1.72
BRF2Q9HAW0 AC009318.4-201ENST00000620496 486 ntBASIC4.31□□□□□ -1.72
BRF2Q9HAW0 AC007490.1-201ENST00000624321 703 ntBASIC4.31□□□□□ -1.72
BRF2Q9HAW0 AC079416.3-201ENST00000624479 549 ntBASIC4.31□□□□□ -1.72
BRF2Q9HAW0 AC097655.1-201ENST00000635075 318 ntBASIC4.31□□□□□ -1.72
BRF2Q9HAW0 LINC00561-201ENST00000565815 2738 ntBASIC4.31□□□□□ -1.72
BRF2Q9HAW0 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
BRF2Q9HAW0 MFSD8-242ENST00000641690 4199 ntBASIC4.31□□□□□ -1.72
BRF2Q9HAW0 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
BRF2Q9HAW0 AP000776.1-201ENST00000530032 1663 ntBASIC4.31□□□□□ -1.72
BRF2Q9HAW0 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
BRF2Q9HAW0 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
BRF2Q9HAW0 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
BRF2Q9HAW0 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
BRF2Q9HAW0 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.31□□□□□ -1.72
BRF2Q9HAW0 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
BRF2Q9HAW0 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
BRF2Q9HAW0 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
BRF2Q9HAW0 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
BRF2Q9HAW0 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
BRF2Q9HAW0 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
BRF2Q9HAW0 RNVU1-3-201ENST00000364313 161 ntBASIC4.3□□□□□ -1.72
BRF2Q9HAW0 MIR550A3-201ENST00000390735 95 ntBASIC4.3□□□□□ -1.72
BRF2Q9HAW0 EIF5P1-201ENST00000400019 1231 ntBASIC4.3□□□□□ -1.72
BRF2Q9HAW0 AL049697.2-201ENST00000403708 294 ntBASIC4.3□□□□□ -1.72
BRF2Q9HAW0 AL139128.1-201ENST00000413921 941 ntBASIC4.3□□□□□ -1.72
BRF2Q9HAW0 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.3□□□□□ -1.72
BRF2Q9HAW0 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.3□□□□□ -1.72
BRF2Q9HAW0 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
BRF2Q9HAW0 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.3□□□□□ -1.72
BRF2Q9HAW0 RPS12P5-201ENST00000423449 371 ntBASIC4.3□□□□□ -1.72
BRF2Q9HAW0 RPS12P10-201ENST00000427031 377 ntBASIC4.3□□□□□ -1.72
BRF2Q9HAW0 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.3□□□□□ -1.72
BRF2Q9HAW0 AC092427.1-201ENST00000439177 601 ntBASIC4.3□□□□□ -1.72
BRF2Q9HAW0 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.3□□□□□ -1.72
BRF2Q9HAW0 RPL36AP15-201ENST00000444514 266 ntBASIC4.3□□□□□ -1.72
BRF2Q9HAW0 RPL23AP43-201ENST00000446445 471 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms