Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 TRGV6-201ENST00000417928 299 ntBASIC4.53□□□□□ -1.68
UPF2Q9HAU5 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.53□□□□□ -1.68
UPF2Q9HAU5 PTP4A1P7-201ENST00000423476 514 ntBASIC4.53□□□□□ -1.68
UPF2Q9HAU5 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC4.53□□□□□ -1.68
UPF2Q9HAU5 FTH1P6-201ENST00000430768 320 ntBASIC4.53□□□□□ -1.68
UPF2Q9HAU5 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.53□□□□□ -1.68
UPF2Q9HAU5 CEACAMP9-201ENST00000442990 513 ntBASIC4.53□□□□□ -1.68
UPF2Q9HAU5 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.53□□□□□ -1.68
UPF2Q9HAU5 RNU6-1218P-201ENST00000458990 108 ntBASIC4.53□□□□□ -1.68
UPF2Q9HAU5 AC008427.1-201ENST00000503102 655 ntBASIC4.53□□□□□ -1.68
UPF2Q9HAU5 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.53□□□□□ -1.68
UPF2Q9HAU5 AC091163.3-201ENST00000518269 1144 ntBASIC4.53□□□□□ -1.68
UPF2Q9HAU5 AC034205.1-201ENST00000520621 638 ntBASIC4.53□□□□□ -1.68
UPF2Q9HAU5 AC022695.1-201ENST00000522089 237 ntBASIC4.53□□□□□ -1.68
UPF2Q9HAU5 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.53□□□□□ -1.68
UPF2Q9HAU5 AC139103.1-201ENST00000534696 1030 ntBASIC4.53□□□□□ -1.68
UPF2Q9HAU5 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC4.53□□□□□ -1.68
UPF2Q9HAU5 AC090888.2-201ENST00000559765 1144 ntBASIC4.53□□□□□ -1.68
UPF2Q9HAU5 MTCO2P2-201ENST00000591258 225 ntBASIC4.53□□□□□ -1.68
UPF2Q9HAU5 AC068790.4-201ENST00000602474 263 ntBASIC4.53□□□□□ -1.68
UPF2Q9HAU5 PSMA6P4-201ENST00000603247 718 ntBASIC4.53□□□□□ -1.68
UPF2Q9HAU5 AL357094.1-201ENST00000603845 844 ntBASIC4.53□□□□□ -1.68
UPF2Q9HAU5 SUMO2P14-201ENST00000604488 293 ntBASIC4.53□□□□□ -1.68
UPF2Q9HAU5 MIR6748-201ENST00000610433 71 ntBASIC4.53□□□□□ -1.68
UPF2Q9HAU5 AC140725.3-201ENST00000616193 880 ntBASIC4.53□□□□□ -1.68
UPF2Q9HAU5 AL590396.4-201ENST00000636779 956 ntBASIC4.53□□□□□ -1.68
UPF2Q9HAU5 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
UPF2Q9HAU5 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
UPF2Q9HAU5 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.53□□□□□ -1.68
UPF2Q9HAU5 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.53□□□□□ -1.68
UPF2Q9HAU5 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
UPF2Q9HAU5 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
UPF2Q9HAU5 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
UPF2Q9HAU5 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
UPF2Q9HAU5 SSR1P2-201ENST00000415208 787 ntBASIC4.52□□□□□ -1.69
UPF2Q9HAU5 VPS26BP1-201ENST00000417155 755 ntBASIC4.52□□□□□ -1.69
UPF2Q9HAU5 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.52□□□□□ -1.69
UPF2Q9HAU5 AL592293.2-201ENST00000422292 996 ntBASIC4.52□□□□□ -1.69
UPF2Q9HAU5 AL158071.1-201ENST00000430315 461 ntBASIC4.52□□□□□ -1.69
UPF2Q9HAU5 AC005189.1-201ENST00000431286 310 ntBASIC4.52□□□□□ -1.69
UPF2Q9HAU5 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.52□□□□□ -1.69
UPF2Q9HAU5 RPS20P1-201ENST00000434853 354 ntBASIC4.52□□□□□ -1.69
UPF2Q9HAU5 NDUFB1P1-201ENST00000435191 180 ntBASIC4.52□□□□□ -1.69
UPF2Q9HAU5 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.52□□□□□ -1.69
UPF2Q9HAU5 SETD6P1-201ENST00000444575 317 ntBASIC4.52□□□□□ -1.69
UPF2Q9HAU5 NDUFAF4P2-201ENST00000445374 520 ntBASIC4.52□□□□□ -1.69
UPF2Q9HAU5 EIF2S2P2-201ENST00000447161 982 ntBASIC4.52□□□□□ -1.69
UPF2Q9HAU5 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.52□□□□□ -1.69
UPF2Q9HAU5 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.52□□□□□ -1.69
UPF2Q9HAU5 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.52□□□□□ -1.69
UPF2Q9HAU5 PPIAP21-201ENST00000464473 501 ntBASIC4.52□□□□□ -1.69
UPF2Q9HAU5 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.52□□□□□ -1.69
UPF2Q9HAU5 S100A11P1-201ENST00000477525 312 ntBASIC4.52□□□□□ -1.69
UPF2Q9HAU5 RN7SL459P-201ENST00000481078 302 ntBASIC4.52□□□□□ -1.69
UPF2Q9HAU5 ACTG1P13-201ENST00000486987 1043 ntBASIC4.52□□□□□ -1.69
UPF2Q9HAU5 AC010627.1-201ENST00000503819 1294 ntBASIC4.52□□□□□ -1.69
UPF2Q9HAU5 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
UPF2Q9HAU5 PCBP2P3-201ENST00000509726 843 ntBASIC4.52□□□□□ -1.69
UPF2Q9HAU5 AC108120.2-201ENST00000512973 294 ntBASIC4.52□□□□□ -1.69
UPF2Q9HAU5 RN7SKP265-201ENST00000516448 223 ntBASIC4.52□□□□□ -1.69
UPF2Q9HAU5 SNORA31.13-201ENST00000516624 135 ntBASIC4.52□□□□□ -1.69
UPF2Q9HAU5 RNU6-347P-201ENST00000516658 105 ntBASIC4.52□□□□□ -1.69
UPF2Q9HAU5 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC4.52□□□□□ -1.69
UPF2Q9HAU5 AC009643.1-201ENST00000532030 391 ntBASIC4.52□□□□□ -1.69
UPF2Q9HAU5 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC4.52□□□□□ -1.69
UPF2Q9HAU5 AC008083.2-201ENST00000546707 476 ntBASIC4.52□□□□□ -1.69
UPF2Q9HAU5 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.52□□□□□ -1.69
UPF2Q9HAU5 TRAV15-201ENST00000556680 249 ntBASIC4.52□□□□□ -1.69
UPF2Q9HAU5 TGIF1P1-201ENST00000558095 802 ntBASIC4.52□□□□□ -1.69
UPF2Q9HAU5 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC4.52□□□□□ -1.69
UPF2Q9HAU5 MIR4509-3-201ENST00000578671 94 ntBASIC4.52□□□□□ -1.69
UPF2Q9HAU5 MIR4509-2-201ENST00000583920 94 ntBASIC4.52□□□□□ -1.69
UPF2Q9HAU5 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
UPF2Q9HAU5 AC008745.1-201ENST00000604064 271 ntBASIC4.52□□□□□ -1.69
UPF2Q9HAU5 AL049844.2-201ENST00000604280 628 ntBASIC4.52□□□□□ -1.69
UPF2Q9HAU5 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
UPF2Q9HAU5 AL157392.4-201ENST00000609756 345 ntBASIC4.52□□□□□ -1.69
UPF2Q9HAU5 RMST_8.1-201ENST00000610287 165 ntBASIC4.52□□□□□ -1.69
UPF2Q9HAU5 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.52□□□□□ -1.69
UPF2Q9HAU5 RNU6-1192P-201ENST00000612197 107 ntBASIC4.52□□□□□ -1.69
UPF2Q9HAU5 AL391261.4-201ENST00000616012 481 ntBASIC4.52□□□□□ -1.69
UPF2Q9HAU5 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
UPF2Q9HAU5 uc_338.9-201ENST00000617424 182 ntBASIC4.52□□□□□ -1.69
UPF2Q9HAU5 MIR4509-1-201ENST00000618224 94 ntBASIC4.52□□□□□ -1.69
UPF2Q9HAU5 RNU6-489P-201ENST00000618289 107 ntBASIC4.52□□□□□ -1.69
UPF2Q9HAU5 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC4.52□□□□□ -1.69
UPF2Q9HAU5 AC079684.1-201ENST00000621405 437 ntBASIC4.52□□□□□ -1.69
UPF2Q9HAU5 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC4.52□□□□□ -1.69
UPF2Q9HAU5 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.52□□□□□ -1.69
UPF2Q9HAU5 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.52□□□□□ -1.69
UPF2Q9HAU5 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
UPF2Q9HAU5 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
UPF2Q9HAU5 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.52□□□□□ -1.69
UPF2Q9HAU5 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC4.51□□□□□ -1.69
UPF2Q9HAU5 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.51□□□□□ -1.69
UPF2Q9HAU5 PHKBP1-201ENST00000450951 1951 ntBASIC4.51□□□□□ -1.69
UPF2Q9HAU5 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
UPF2Q9HAU5 AL451142.2-201ENST00000429076 2090 ntBASIC4.51□□□□□ -1.69
UPF2Q9HAU5 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
UPF2Q9HAU5 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms