Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AC136624.4-201ENST00000573044 370 ntBASIC3.82□□□□□ -1.8
LRRC40Q9H9A6 OR2BH1P-201ENST00000608850 864 ntBASIC3.82□□□□□ -1.8
LRRC40Q9H9A6 AP001033.2-201ENST00000609701 1003 ntBASIC3.82□□□□□ -1.8
LRRC40Q9H9A6 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.82□□□□□ -1.8
LRRC40Q9H9A6 ZYXP1-201ENST00000617638 118 ntBASIC3.82□□□□□ -1.8
LRRC40Q9H9A6 RNA5SP196-201ENST00000625967 102 ntBASIC3.82□□□□□ -1.8
LRRC40Q9H9A6 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
LRRC40Q9H9A6 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
LRRC40Q9H9A6 SEC63P2-201ENST00000503863 1939 ntBASIC3.82□□□□□ -1.8
LRRC40Q9H9A6 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.82□□□□□ -1.8
LRRC40Q9H9A6 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LRRC40Q9H9A6 MTND5P11-201ENST00000511037 1812 ntBASIC3.81□□□□□ -1.8
LRRC40Q9H9A6 CR381670.1-201ENST00000624291 1693 ntBASIC3.81□□□□□ -1.8
LRRC40Q9H9A6 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
LRRC40Q9H9A6 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LRRC40Q9H9A6 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.81□□□□□ -1.8
LRRC40Q9H9A6 DSTNP4-201ENST00000399472 474 ntBASIC3.81□□□□□ -1.8
LRRC40Q9H9A6 PPIAP31-201ENST00000405422 495 ntBASIC3.81□□□□□ -1.8
LRRC40Q9H9A6 RNU6-628P-201ENST00000410675 107 ntBASIC3.81□□□□□ -1.8
LRRC40Q9H9A6 AC005517.2-201ENST00000424673 553 ntBASIC3.81□□□□□ -1.8
LRRC40Q9H9A6 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.81□□□□□ -1.8
LRRC40Q9H9A6 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
LRRC40Q9H9A6 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.81□□□□□ -1.8
LRRC40Q9H9A6 HMGB1P45-201ENST00000435986 653 ntBASIC3.81□□□□□ -1.8
LRRC40Q9H9A6 RPS15AP29-201ENST00000445539 400 ntBASIC3.81□□□□□ -1.8
LRRC40Q9H9A6 NANOGP10-201ENST00000453325 895 ntBASIC3.81□□□□□ -1.8
LRRC40Q9H9A6 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.81□□□□□ -1.8
LRRC40Q9H9A6 MTCO3P16-201ENST00000454456 754 ntBASIC3.81□□□□□ -1.8
LRRC40Q9H9A6 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.81□□□□□ -1.8
LRRC40Q9H9A6 CEACAMP4-201ENST00000457676 421 ntBASIC3.81□□□□□ -1.8
LRRC40Q9H9A6 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.81□□□□□ -1.8
LRRC40Q9H9A6 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.81□□□□□ -1.8
LRRC40Q9H9A6 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC3.81□□□□□ -1.8
LRRC40Q9H9A6 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
LRRC40Q9H9A6 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC3.81□□□□□ -1.8
LRRC40Q9H9A6 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.81□□□□□ -1.8
LRRC40Q9H9A6 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.81□□□□□ -1.8
LRRC40Q9H9A6 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC3.81□□□□□ -1.8
LRRC40Q9H9A6 AC099489.2-201ENST00000574976 260 ntBASIC3.81□□□□□ -1.8
LRRC40Q9H9A6 AC090616.5-202ENST00000582111 297 ntBASIC3.81□□□□□ -1.8
LRRC40Q9H9A6 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.81□□□□□ -1.8
LRRC40Q9H9A6 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.81□□□□□ -1.8
LRRC40Q9H9A6 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.81□□□□□ -1.8
LRRC40Q9H9A6 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LRRC40Q9H9A6 AL163642.2-201ENST00000604722 1019 ntBASIC3.81□□□□□ -1.8
LRRC40Q9H9A6 AL450270.1-201ENST00000606160 391 ntBASIC3.81□□□□□ -1.8
LRRC40Q9H9A6 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LRRC40Q9H9A6 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
LRRC40Q9H9A6 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.81□□□□□ -1.8
LRRC40Q9H9A6 CEP170P1-201ENST00000502249 4587 ntBASIC3.81□□□□□ -1.8
LRRC40Q9H9A6 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.81□□□□□ -1.8
LRRC40Q9H9A6 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LRRC40Q9H9A6 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LRRC40Q9H9A6 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LRRC40Q9H9A6 AF127577.6-201ENST00000623352 2191 ntBASIC3.8□□□□□ -1.8
LRRC40Q9H9A6 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LRRC40Q9H9A6 AC107081.3-201ENST00000612715 2034 ntBASIC3.8□□□□□ -1.8
LRRC40Q9H9A6 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.8□□□□□ -1.8
LRRC40Q9H9A6 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.8□□□□□ -1.8
LRRC40Q9H9A6 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
LRRC40Q9H9A6 RPS4XP5-202ENST00000449995 1334 ntBASIC3.8□□□□□ -1.8
LRRC40Q9H9A6 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LRRC40Q9H9A6 AL133383.2-201ENST00000622958 2336 ntBASIC3.8□□□□□ -1.8
LRRC40Q9H9A6 RNU6-1243P-201ENST00000364028 107 ntBASIC3.8□□□□□ -1.8
LRRC40Q9H9A6 RNU6-1005P-201ENST00000384519 107 ntBASIC3.8□□□□□ -1.8
LRRC40Q9H9A6 HSPE1P26-201ENST00000405341 275 ntBASIC3.8□□□□□ -1.8
LRRC40Q9H9A6 AC244098.2-201ENST00000422068 99 ntBASIC3.8□□□□□ -1.8
LRRC40Q9H9A6 MORF4L1P7-201ENST00000426038 703 ntBASIC3.8□□□□□ -1.8
LRRC40Q9H9A6 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.8□□□□□ -1.8
LRRC40Q9H9A6 BMS1P19-201ENST00000433925 393 ntBASIC3.8□□□□□ -1.8
LRRC40Q9H9A6 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LRRC40Q9H9A6 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.8□□□□□ -1.8
LRRC40Q9H9A6 AC006994.1-201ENST00000438212 839 ntBASIC3.8□□□□□ -1.8
LRRC40Q9H9A6 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.8□□□□□ -1.8
LRRC40Q9H9A6 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.8□□□□□ -1.8
LRRC40Q9H9A6 AL035407.2-201ENST00000454090 378 ntBASIC3.8□□□□□ -1.8
LRRC40Q9H9A6 RN7SL385P-201ENST00000468873 276 ntBASIC3.8□□□□□ -1.8
LRRC40Q9H9A6 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC3.8□□□□□ -1.8
LRRC40Q9H9A6 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.8□□□□□ -1.8
LRRC40Q9H9A6 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.8□□□□□ -1.8
LRRC40Q9H9A6 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.8□□□□□ -1.8
LRRC40Q9H9A6 SCARNA14-201ENST00000516903 136 ntBASIC3.8□□□□□ -1.8
LRRC40Q9H9A6 RNU6-352P-201ENST00000516908 107 ntBASIC3.8□□□□□ -1.8
LRRC40Q9H9A6 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.8□□□□□ -1.8
LRRC40Q9H9A6 OR4R3P-201ENST00000525084 838 ntBASIC3.8□□□□□ -1.8
LRRC40Q9H9A6 HIGD1AP5-201ENST00000529959 259 ntBASIC3.8□□□□□ -1.8
LRRC40Q9H9A6 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.8□□□□□ -1.8
LRRC40Q9H9A6 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LRRC40Q9H9A6 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.8□□□□□ -1.8
LRRC40Q9H9A6 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.8□□□□□ -1.8
LRRC40Q9H9A6 AC053481.4-201ENST00000583164 216 ntBASIC3.8□□□□□ -1.8
LRRC40Q9H9A6 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.8□□□□□ -1.8
LRRC40Q9H9A6 AC008687.2-201ENST00000597865 520 ntBASIC3.8□□□□□ -1.8
LRRC40Q9H9A6 AL009028.1-201ENST00000604895 802 ntBASIC3.8□□□□□ -1.8
LRRC40Q9H9A6 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.8□□□□□ -1.8
LRRC40Q9H9A6 FP236240.3-201ENST00000623061 327 ntBASIC3.8□□□□□ -1.8
LRRC40Q9H9A6 AC048347.1-201ENST00000624621 427 ntBASIC3.8□□□□□ -1.8
LRRC40Q9H9A6 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LRRC40Q9H9A6 MAPK10-372ENST00000641954 3413 ntBASIC3.8□□□□□ -1.8
LRRC40Q9H9A6 MTND5P28-201ENST00000438005 1594 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms