Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AC069277.2-201ENST00000454211 432 ntBASIC3.26□□□□□ -1.89
RSPO3Q9BXY4 ZNF736P4Y-201ENST00000454995 1243 ntBASIC3.26□□□□□ -1.89
RSPO3Q9BXY4 AC025181.1-201ENST00000477507 416 ntBASIC3.26□□□□□ -1.89
RSPO3Q9BXY4 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.26□□□□□ -1.89
RSPO3Q9BXY4 AC021205.2-201ENST00000480069 347 ntBASIC3.26□□□□□ -1.89
RSPO3Q9BXY4 AC005912.1-201ENST00000495392 255 ntBASIC3.26□□□□□ -1.89
RSPO3Q9BXY4 TRAV31-201ENST00000502780 342 ntBASIC3.26□□□□□ -1.89
RSPO3Q9BXY4 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RSPO3Q9BXY4 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.26□□□□□ -1.89
RSPO3Q9BXY4 SNX5P1-201ENST00000505757 1041 ntBASIC3.26□□□□□ -1.89
RSPO3Q9BXY4 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC3.26□□□□□ -1.89
RSPO3Q9BXY4 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.26□□□□□ -1.89
RSPO3Q9BXY4 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RSPO3Q9BXY4 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.26□□□□□ -1.89
RSPO3Q9BXY4 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC3.26□□□□□ -1.89
RSPO3Q9BXY4 AC012414.2-201ENST00000559474 187 ntBASIC3.26□□□□□ -1.89
RSPO3Q9BXY4 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.26□□□□□ -1.89
RSPO3Q9BXY4 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.26□□□□□ -1.89
RSPO3Q9BXY4 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.26□□□□□ -1.89
RSPO3Q9BXY4 AC008121.2-201ENST00000614647 523 ntBASIC3.26□□□□□ -1.89
RSPO3Q9BXY4 AL391261.4-201ENST00000616012 481 ntBASIC3.26□□□□□ -1.89
RSPO3Q9BXY4 AC123768.4-201ENST00000616244 701 ntBASIC3.26□□□□□ -1.89
RSPO3Q9BXY4 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.26□□□□□ -1.89
RSPO3Q9BXY4 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.26□□□□□ -1.89
RSPO3Q9BXY4 AC091948.2-201ENST00000636510 279 ntBASIC3.26□□□□□ -1.89
RSPO3Q9BXY4 AC012442.3-202ENST00000636742 206 ntBASIC3.26□□□□□ -1.89
RSPO3Q9BXY4 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.26□□□□□ -1.89
RSPO3Q9BXY4 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RSPO3Q9BXY4 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.26□□□□□ -1.89
RSPO3Q9BXY4 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RSPO3Q9BXY4 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
RSPO3Q9BXY4 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.25□□□□□ -1.89
RSPO3Q9BXY4 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RSPO3Q9BXY4 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RSPO3Q9BXY4 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
RSPO3Q9BXY4 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RSPO3Q9BXY4 FRG1CP-201ENST00000358464 769 ntBASIC3.25□□□□□ -1.89
RSPO3Q9BXY4 RNA5SP124-201ENST00000362739 110 ntBASIC3.25□□□□□ -1.89
RSPO3Q9BXY4 SNORA11C-201ENST00000408532 129 ntBASIC3.25□□□□□ -1.89
RSPO3Q9BXY4 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC3.25□□□□□ -1.89
RSPO3Q9BXY4 AL512504.1-201ENST00000415494 778 ntBASIC3.25□□□□□ -1.89
RSPO3Q9BXY4 AL357078.2-201ENST00000416486 427 ntBASIC3.25□□□□□ -1.89
RSPO3Q9BXY4 AC068533.1-201ENST00000418542 415 ntBASIC3.25□□□□□ -1.89
RSPO3Q9BXY4 KRR1P1-201ENST00000419430 803 ntBASIC3.25□□□□□ -1.89
RSPO3Q9BXY4 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC3.25□□□□□ -1.89
RSPO3Q9BXY4 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.25□□□□□ -1.89
RSPO3Q9BXY4 AP000907.1-201ENST00000428428 510 ntBASIC3.25□□□□□ -1.89
RSPO3Q9BXY4 MTND4P15-201ENST00000437913 1033 ntBASIC3.25□□□□□ -1.89
RSPO3Q9BXY4 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC3.25□□□□□ -1.89
RSPO3Q9BXY4 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.25□□□□□ -1.89
RSPO3Q9BXY4 AL691517.1-201ENST00000440833 1235 ntBASIC3.25□□□□□ -1.89
RSPO3Q9BXY4 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC3.25□□□□□ -1.89
RSPO3Q9BXY4 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
RSPO3Q9BXY4 TVP23BP2-201ENST00000455082 615 ntBASIC3.25□□□□□ -1.89
RSPO3Q9BXY4 U3.44-201ENST00000458938 192 ntBASIC3.25□□□□□ -1.89
RSPO3Q9BXY4 RNU7-170P-201ENST00000459303 61 ntBASIC3.25□□□□□ -1.89
RSPO3Q9BXY4 AC004801.2-202ENST00000463559 283 ntBASIC3.25□□□□□ -1.89
RSPO3Q9BXY4 RN7SL594P-201ENST00000470590 287 ntBASIC3.25□□□□□ -1.89
RSPO3Q9BXY4 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC3.25□□□□□ -1.89
RSPO3Q9BXY4 AC012170.1-201ENST00000495139 359 ntBASIC3.25□□□□□ -1.89
RSPO3Q9BXY4 FTH1P24-201ENST00000503502 462 ntBASIC3.25□□□□□ -1.89
RSPO3Q9BXY4 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.25□□□□□ -1.89
RSPO3Q9BXY4 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
RSPO3Q9BXY4 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.25□□□□□ -1.89
RSPO3Q9BXY4 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.25□□□□□ -1.89
RSPO3Q9BXY4 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
RSPO3Q9BXY4 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.25□□□□□ -1.89
RSPO3Q9BXY4 AC108471.1-201ENST00000513977 287 ntBASIC3.25□□□□□ -1.89
RSPO3Q9BXY4 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.25□□□□□ -1.89
RSPO3Q9BXY4 RNU6-467P-201ENST00000517027 110 ntBASIC3.25□□□□□ -1.89
RSPO3Q9BXY4 OR8K2P-201ENST00000524645 927 ntBASIC3.25□□□□□ -1.89
RSPO3Q9BXY4 AC090079.2-201ENST00000575289 768 ntBASIC3.25□□□□□ -1.89
RSPO3Q9BXY4 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.25□□□□□ -1.89
RSPO3Q9BXY4 AP001180.3-201ENST00000582221 145 ntBASIC3.25□□□□□ -1.89
RSPO3Q9BXY4 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC3.25□□□□□ -1.89
RSPO3Q9BXY4 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.25□□□□□ -1.89
RSPO3Q9BXY4 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.25□□□□□ -1.89
RSPO3Q9BXY4 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.25□□□□□ -1.89
RSPO3Q9BXY4 BNIP3P38-201ENST00000601117 544 ntBASIC3.25□□□□□ -1.89
RSPO3Q9BXY4 RNVU1-4-201ENST00000612985 164 ntBASIC3.25□□□□□ -1.89
RSPO3Q9BXY4 AL121772.2-201ENST00000614331 297 ntBASIC3.25□□□□□ -1.89
RSPO3Q9BXY4 U4.6-201ENST00000621618 127 ntBASIC3.25□□□□□ -1.89
RSPO3Q9BXY4 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RSPO3Q9BXY4 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.25□□□□□ -1.89
RSPO3Q9BXY4 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
RSPO3Q9BXY4 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
RSPO3Q9BXY4 AC024341.1-201ENST00000526444 1552 ntBASIC3.25□□□□□ -1.89
RSPO3Q9BXY4 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RSPO3Q9BXY4 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RSPO3Q9BXY4 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
RSPO3Q9BXY4 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.24□□□□□ -1.89
RSPO3Q9BXY4 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
RSPO3Q9BXY4 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
RSPO3Q9BXY4 RNA5SP387-201ENST00000364226 106 ntBASIC3.24□□□□□ -1.89
RSPO3Q9BXY4 Y_RNA.333-201ENST00000365274 102 ntBASIC3.24□□□□□ -1.89
RSPO3Q9BXY4 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
RSPO3Q9BXY4 MIR7-1-201ENST00000384871 110 ntBASIC3.24□□□□□ -1.89
RSPO3Q9BXY4 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC3.24□□□□□ -1.89
RSPO3Q9BXY4 SYF2P2-201ENST00000417620 583 ntBASIC3.24□□□□□ -1.89
RSPO3Q9BXY4 AC048351.1-201ENST00000420064 602 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms