Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
RPAP1Q9BWH6 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RPAP1Q9BWH6 RN7SKP222-201ENST00000410651 315 ntBASIC4.29□□□□□ -1.72
RPAP1Q9BWH6 AC006989.1-201ENST00000427212 131 ntBASIC4.29□□□□□ -1.72
RPAP1Q9BWH6 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.29□□□□□ -1.72
RPAP1Q9BWH6 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.29□□□□□ -1.72
RPAP1Q9BWH6 AC115115.1-201ENST00000449927 248 ntBASIC4.29□□□□□ -1.72
RPAP1Q9BWH6 RPS29P2-201ENST00000479278 136 ntBASIC4.29□□□□□ -1.72
RPAP1Q9BWH6 SETP6-201ENST00000479329 568 ntBASIC4.29□□□□□ -1.72
RPAP1Q9BWH6 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.29□□□□□ -1.72
RPAP1Q9BWH6 ACTR6P1-201ENST00000514311 1104 ntBASIC4.29□□□□□ -1.72
RPAP1Q9BWH6 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.29□□□□□ -1.72
RPAP1Q9BWH6 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RPAP1Q9BWH6 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.29□□□□□ -1.72
RPAP1Q9BWH6 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.29□□□□□ -1.72
RPAP1Q9BWH6 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.29□□□□□ -1.72
RPAP1Q9BWH6 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.29□□□□□ -1.72
RPAP1Q9BWH6 AC006077.1-201ENST00000604746 343 ntBASIC4.29□□□□□ -1.72
RPAP1Q9BWH6 RNVU1-4-201ENST00000612985 164 ntBASIC4.29□□□□□ -1.72
RPAP1Q9BWH6 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
RPAP1Q9BWH6 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RPAP1Q9BWH6 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
RPAP1Q9BWH6 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RPAP1Q9BWH6 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.29□□□□□ -1.72
RPAP1Q9BWH6 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RPAP1Q9BWH6 CEP170P1-201ENST00000502249 4587 ntBASIC4.29□□□□□ -1.72
RPAP1Q9BWH6 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RPAP1Q9BWH6 AC092079.1-201ENST00000558620 1985 ntBASIC4.29□□□□□ -1.72
RPAP1Q9BWH6 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC4.29□□□□□ -1.72
RPAP1Q9BWH6 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
RPAP1Q9BWH6 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RPAP1Q9BWH6 AC093719.1-202ENST00000392735 373 ntBASIC4.28□□□□□ -1.72
RPAP1Q9BWH6 RNA5SP239-201ENST00000410218 129 ntBASIC4.28□□□□□ -1.72
RPAP1Q9BWH6 AC099336.2-201ENST00000422457 254 ntBASIC4.28□□□□□ -1.72
RPAP1Q9BWH6 OSTCP5-201ENST00000425293 453 ntBASIC4.28□□□□□ -1.72
RPAP1Q9BWH6 MTCO1P57-201ENST00000432182 261 ntBASIC4.28□□□□□ -1.72
RPAP1Q9BWH6 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.28□□□□□ -1.72
RPAP1Q9BWH6 AL591503.2-201ENST00000442314 1005 ntBASIC4.28□□□□□ -1.72
RPAP1Q9BWH6 AL627224.1-201ENST00000448334 444 ntBASIC4.28□□□□□ -1.72
RPAP1Q9BWH6 RNU6-775P-201ENST00000459318 96 ntBASIC4.28□□□□□ -1.72
RPAP1Q9BWH6 AC023598.1-201ENST00000472521 361 ntBASIC4.28□□□□□ -1.72
RPAP1Q9BWH6 AP000563.1-201ENST00000490865 758 ntBASIC4.28□□□□□ -1.72
RPAP1Q9BWH6 ARL2BPP6-201ENST00000512757 439 ntBASIC4.28□□□□□ -1.72
RPAP1Q9BWH6 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.28□□□□□ -1.72
RPAP1Q9BWH6 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.28□□□□□ -1.72
RPAP1Q9BWH6 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.28□□□□□ -1.72
RPAP1Q9BWH6 AC074029.2-201ENST00000551045 634 ntBASIC4.28□□□□□ -1.72
RPAP1Q9BWH6 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.28□□□□□ -1.72
RPAP1Q9BWH6 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.28□□□□□ -1.72
RPAP1Q9BWH6 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.28□□□□□ -1.72
RPAP1Q9BWH6 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.28□□□□□ -1.72
RPAP1Q9BWH6 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.28□□□□□ -1.72
RPAP1Q9BWH6 AC084036.1-201ENST00000609190 508 ntBASIC4.28□□□□□ -1.72
RPAP1Q9BWH6 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.28□□□□□ -1.72
RPAP1Q9BWH6 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
RPAP1Q9BWH6 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.28□□□□□ -1.72
RPAP1Q9BWH6 Z73965.1-201ENST00000623412 2297 ntBASIC4.28□□□□□ -1.72
RPAP1Q9BWH6 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
RPAP1Q9BWH6 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
RPAP1Q9BWH6 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
RPAP1Q9BWH6 RNU6-532P-201ENST00000384318 107 ntBASIC4.27□□□□□ -1.73
RPAP1Q9BWH6 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
RPAP1Q9BWH6 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.27□□□□□ -1.73
RPAP1Q9BWH6 ZNF92P1Y-201ENST00000415010 1191 ntBASIC4.27□□□□□ -1.73
RPAP1Q9BWH6 ELOCP10-201ENST00000440624 327 ntBASIC4.27□□□□□ -1.73
RPAP1Q9BWH6 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.27□□□□□ -1.73
RPAP1Q9BWH6 AL354710.1-201ENST00000453641 246 ntBASIC4.27□□□□□ -1.73
RPAP1Q9BWH6 ANP32BP2-201ENST00000454525 545 ntBASIC4.27□□□□□ -1.73
RPAP1Q9BWH6 BX510359.1-201ENST00000456973 237 ntBASIC4.27□□□□□ -1.73
RPAP1Q9BWH6 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.27□□□□□ -1.73
RPAP1Q9BWH6 FTH1P24-201ENST00000503502 462 ntBASIC4.27□□□□□ -1.73
RPAP1Q9BWH6 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.27□□□□□ -1.73
RPAP1Q9BWH6 RNU2-27P-201ENST00000516185 142 ntBASIC4.27□□□□□ -1.73
RPAP1Q9BWH6 RN7SKP57-201ENST00000517248 293 ntBASIC4.27□□□□□ -1.73
RPAP1Q9BWH6 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.27□□□□□ -1.73
RPAP1Q9BWH6 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.27□□□□□ -1.73
RPAP1Q9BWH6 AC106782.4-201ENST00000568264 210 ntBASIC4.27□□□□□ -1.73
RPAP1Q9BWH6 AC079880.2-201ENST00000603790 1213 ntBASIC4.27□□□□□ -1.73
RPAP1Q9BWH6 ELOCP34-201ENST00000604436 327 ntBASIC4.27□□□□□ -1.73
RPAP1Q9BWH6 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
RPAP1Q9BWH6 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC4.27□□□□□ -1.73
RPAP1Q9BWH6 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RPAP1Q9BWH6 AC090337.1-201ENST00000579651 2074 ntBASIC4.27□□□□□ -1.73
RPAP1Q9BWH6 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.27□□□□□ -1.73
RPAP1Q9BWH6 RNU4-35P-201ENST00000362588 141 ntBASIC4.27□□□□□ -1.73
RPAP1Q9BWH6 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RPAP1Q9BWH6 AL136116.1-201ENST00000403591 381 ntBASIC4.27□□□□□ -1.73
RPAP1Q9BWH6 RN7SKP111-201ENST00000410349 271 ntBASIC4.27□□□□□ -1.73
RPAP1Q9BWH6 RPL26P37-201ENST00000411983 438 ntBASIC4.27□□□□□ -1.73
RPAP1Q9BWH6 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.27□□□□□ -1.73
RPAP1Q9BWH6 BOLA3P4-201ENST00000418151 400 ntBASIC4.27□□□□□ -1.73
RPAP1Q9BWH6 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.27□□□□□ -1.73
RPAP1Q9BWH6 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.27□□□□□ -1.73
RPAP1Q9BWH6 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.27□□□□□ -1.73
RPAP1Q9BWH6 RPL5P24-201ENST00000463742 885 ntBASIC4.27□□□□□ -1.73
RPAP1Q9BWH6 RN7SL594P-201ENST00000470590 287 ntBASIC4.27□□□□□ -1.73
RPAP1Q9BWH6 RN7SL807P-201ENST00000470923 297 ntBASIC4.27□□□□□ -1.73
RPAP1Q9BWH6 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.27□□□□□ -1.73
RPAP1Q9BWH6 ACTG1P13-201ENST00000486987 1043 ntBASIC4.27□□□□□ -1.73
RPAP1Q9BWH6 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms