Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 MTCO2P23-201ENST00000425216 680 ntBASIC3.79□□□□□ -1.8
CCDC28BQ9BUN5 AL590762.4-201ENST00000425885 253 ntBASIC3.79□□□□□ -1.8
CCDC28BQ9BUN5 OR5BE1P-201ENST00000425977 939 ntBASIC3.79□□□□□ -1.8
CCDC28BQ9BUN5 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.79□□□□□ -1.8
CCDC28BQ9BUN5 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC28BQ9BUN5 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC28BQ9BUN5 AC002542.1-201ENST00000440683 193 ntBASIC3.79□□□□□ -1.8
CCDC28BQ9BUN5 TXNP1-201ENST00000441872 371 ntBASIC3.79□□□□□ -1.8
CCDC28BQ9BUN5 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC28BQ9BUN5 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC28BQ9BUN5 AL031313.1-201ENST00000448435 256 ntBASIC3.79□□□□□ -1.8
CCDC28BQ9BUN5 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC28BQ9BUN5 AC005229.2-201ENST00000456995 399 ntBASIC3.79□□□□□ -1.8
CCDC28BQ9BUN5 AC010683.1-201ENST00000473673 378 ntBASIC3.79□□□□□ -1.8
CCDC28BQ9BUN5 RN7SL860P-201ENST00000473738 223 ntBASIC3.79□□□□□ -1.8
CCDC28BQ9BUN5 RN7SL177P-201ENST00000476596 299 ntBASIC3.79□□□□□ -1.8
CCDC28BQ9BUN5 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC28BQ9BUN5 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.79□□□□□ -1.8
CCDC28BQ9BUN5 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.79□□□□□ -1.8
CCDC28BQ9BUN5 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC28BQ9BUN5 AP001207.2-201ENST00000519490 539 ntBASIC3.79□□□□□ -1.8
CCDC28BQ9BUN5 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3.79□□□□□ -1.8
CCDC28BQ9BUN5 AL161713.1-201ENST00000555538 145 ntBASIC3.79□□□□□ -1.8
CCDC28BQ9BUN5 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.79□□□□□ -1.8
CCDC28BQ9BUN5 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC28BQ9BUN5 ZNF971P-201ENST00000562068 1249 ntBASIC3.79□□□□□ -1.8
CCDC28BQ9BUN5 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC28BQ9BUN5 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC28BQ9BUN5 MIR4738-201ENST00000579134 87 ntBASIC3.79□□□□□ -1.8
CCDC28BQ9BUN5 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC28BQ9BUN5 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC28BQ9BUN5 AC073387.2-201ENST00000604797 784 ntBASIC3.79□□□□□ -1.8
CCDC28BQ9BUN5 AC011816.2-201ENST00000607089 556 ntBASIC3.79□□□□□ -1.8
CCDC28BQ9BUN5 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC28BQ9BUN5 uc_338.9-201ENST00000617424 182 ntBASIC3.79□□□□□ -1.8
CCDC28BQ9BUN5 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC28BQ9BUN5 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC3.79□□□□□ -1.8
CCDC28BQ9BUN5 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC28BQ9BUN5 OR5BE1P-202ENST00000641168 1176 ntBASIC3.79□□□□□ -1.8
CCDC28BQ9BUN5 AC073055.1-201ENST00000456901 1621 ntBASIC3.79□□□□□ -1.8
CCDC28BQ9BUN5 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC3.79□□□□□ -1.8
CCDC28BQ9BUN5 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC28BQ9BUN5 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
CCDC28BQ9BUN5 PWAR6-201ENST00000552334 4618 ntBASIC3.79□□□□□ -1.8
CCDC28BQ9BUN5 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC28BQ9BUN5 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
CCDC28BQ9BUN5 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC28BQ9BUN5 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC28BQ9BUN5 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC28BQ9BUN5 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
CCDC28BQ9BUN5 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC28BQ9BUN5 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC28BQ9BUN5 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.78□□□□□ -1.8
CCDC28BQ9BUN5 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
CCDC28BQ9BUN5 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC28BQ9BUN5 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC28BQ9BUN5 RNVU1-6-201ENST00000364688 164 ntBASIC3.78□□□□□ -1.8
CCDC28BQ9BUN5 MIR92A2-201ENST00000385299 75 ntBASIC3.78□□□□□ -1.8
CCDC28BQ9BUN5 AC092745.2-202ENST00000411880 369 ntBASIC3.78□□□□□ -1.8
CCDC28BQ9BUN5 AC011933.1-201ENST00000413334 321 ntBASIC3.78□□□□□ -1.8
CCDC28BQ9BUN5 AL590139.1-201ENST00000416267 400 ntBASIC3.78□□□□□ -1.8
CCDC28BQ9BUN5 TRGV6-201ENST00000417928 299 ntBASIC3.78□□□□□ -1.8
CCDC28BQ9BUN5 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC3.78□□□□□ -1.8
CCDC28BQ9BUN5 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC28BQ9BUN5 MTCO1P53-201ENST00000441633 699 ntBASIC3.78□□□□□ -1.8
CCDC28BQ9BUN5 AL592437.1-201ENST00000443781 492 ntBASIC3.78□□□□□ -1.8
CCDC28BQ9BUN5 RANP8-201ENST00000444720 713 ntBASIC3.78□□□□□ -1.8
CCDC28BQ9BUN5 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.78□□□□□ -1.8
CCDC28BQ9BUN5 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC28BQ9BUN5 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
CCDC28BQ9BUN5 AC116533.1-201ENST00000459748 321 ntBASIC3.78□□□□□ -1.8
CCDC28BQ9BUN5 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.78□□□□□ -1.8
CCDC28BQ9BUN5 AC041039.1-201ENST00000485656 536 ntBASIC3.78□□□□□ -1.8
CCDC28BQ9BUN5 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC28BQ9BUN5 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.78□□□□□ -1.8
CCDC28BQ9BUN5 RNU6-1028P-201ENST00000517164 93 ntBASIC3.78□□□□□ -1.8
CCDC28BQ9BUN5 AC091163.3-201ENST00000518269 1144 ntBASIC3.78□□□□□ -1.8
CCDC28BQ9BUN5 AC087369.1-201ENST00000520775 996 ntBASIC3.78□□□□□ -1.8
CCDC28BQ9BUN5 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC28BQ9BUN5 AC093331.1-201ENST00000521474 169 ntBASIC3.78□□□□□ -1.8
CCDC28BQ9BUN5 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC28BQ9BUN5 AP001636.2-201ENST00000525517 696 ntBASIC3.78□□□□□ -1.8
CCDC28BQ9BUN5 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC28BQ9BUN5 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC28BQ9BUN5 PSMB7P1-201ENST00000556349 514 ntBASIC3.78□□□□□ -1.8
CCDC28BQ9BUN5 NPM1P47-201ENST00000560843 856 ntBASIC3.78□□□□□ -1.8
CCDC28BQ9BUN5 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.78□□□□□ -1.8
CCDC28BQ9BUN5 MIR6868-201ENST00000611215 58 ntBASIC3.78□□□□□ -1.8
CCDC28BQ9BUN5 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.78□□□□□ -1.8
CCDC28BQ9BUN5 U6.107-201ENST00000637108 79 ntBASIC3.78□□□□□ -1.8
CCDC28BQ9BUN5 AC139713.2-210ENST00000641741 992 ntBASIC3.78□□□□□ -1.8
CCDC28BQ9BUN5 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC28BQ9BUN5 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC28BQ9BUN5 AC096656.1-201ENST00000623826 1364 ntBASIC3.77□□□□□ -1.81
CCDC28BQ9BUN5 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC28BQ9BUN5 MTND4P31-201ENST00000425607 1343 ntBASIC3.77□□□□□ -1.81
CCDC28BQ9BUN5 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC28BQ9BUN5 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC28BQ9BUN5 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC28BQ9BUN5 RNA5SP366-201ENST00000365454 123 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms