Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CDK5RAP1Q96SZ6 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CDK5RAP1Q96SZ6 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.21□□□□□ -1.58
CDK5RAP1Q96SZ6 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CDK5RAP1Q96SZ6 Y_RNA.9-201ENST00000362354 101 ntBASIC5.21□□□□□ -1.58
CDK5RAP1Q96SZ6 RNU5F-7P-201ENST00000363696 115 ntBASIC5.21□□□□□ -1.58
CDK5RAP1Q96SZ6 Y_RNA.302-201ENST00000364997 102 ntBASIC5.21□□□□□ -1.58
CDK5RAP1Q96SZ6 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CDK5RAP1Q96SZ6 RNU6-332P-201ENST00000391193 108 ntBASIC5.21□□□□□ -1.58
CDK5RAP1Q96SZ6 CALM2P3-201ENST00000400429 449 ntBASIC5.21□□□□□ -1.58
CDK5RAP1Q96SZ6 RPL21P67-201ENST00000402896 478 ntBASIC5.21□□□□□ -1.58
CDK5RAP1Q96SZ6 SNORA11B-201ENST00000408175 129 ntBASIC5.21□□□□□ -1.58
CDK5RAP1Q96SZ6 AL139128.1-201ENST00000413921 941 ntBASIC5.21□□□□□ -1.58
CDK5RAP1Q96SZ6 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.21□□□□□ -1.58
CDK5RAP1Q96SZ6 HMGB3P23-201ENST00000414981 585 ntBASIC5.21□□□□□ -1.58
CDK5RAP1Q96SZ6 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.21□□□□□ -1.58
CDK5RAP1Q96SZ6 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC5.21□□□□□ -1.58
CDK5RAP1Q96SZ6 AC092647.1-201ENST00000420654 287 ntBASIC5.21□□□□□ -1.58
CDK5RAP1Q96SZ6 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC5.21□□□□□ -1.58
CDK5RAP1Q96SZ6 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.21□□□□□ -1.58
CDK5RAP1Q96SZ6 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CDK5RAP1Q96SZ6 AC092170.1-201ENST00000440211 356 ntBASIC5.21□□□□□ -1.58
CDK5RAP1Q96SZ6 TXNP5-201ENST00000441043 315 ntBASIC5.21□□□□□ -1.58
CDK5RAP1Q96SZ6 MTND4P19-201ENST00000446659 478 ntBASIC5.21□□□□□ -1.58
CDK5RAP1Q96SZ6 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.21□□□□□ -1.58
CDK5RAP1Q96SZ6 SBDSP1-204ENST00000453858 737 ntBASIC5.21□□□□□ -1.58
CDK5RAP1Q96SZ6 AL035407.2-201ENST00000454090 378 ntBASIC5.21□□□□□ -1.58
CDK5RAP1Q96SZ6 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.21□□□□□ -1.58
CDK5RAP1Q96SZ6 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC5.21□□□□□ -1.58
CDK5RAP1Q96SZ6 OR6K1P-201ENST00000456766 971 ntBASIC5.21□□□□□ -1.58
CDK5RAP1Q96SZ6 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC5.21□□□□□ -1.58
CDK5RAP1Q96SZ6 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.21□□□□□ -1.58
CDK5RAP1Q96SZ6 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC5.21□□□□□ -1.58
CDK5RAP1Q96SZ6 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.21□□□□□ -1.58
CDK5RAP1Q96SZ6 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC5.21□□□□□ -1.58
CDK5RAP1Q96SZ6 RNU6-358P-201ENST00000516564 75 ntBASIC5.21□□□□□ -1.58
CDK5RAP1Q96SZ6 AC012339.2-201ENST00000523996 453 ntBASIC5.21□□□□□ -1.58
CDK5RAP1Q96SZ6 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC5.21□□□□□ -1.58
CDK5RAP1Q96SZ6 AC005832.3-201ENST00000537929 631 ntBASIC5.21□□□□□ -1.58
CDK5RAP1Q96SZ6 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CDK5RAP1Q96SZ6 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC5.21□□□□□ -1.58
CDK5RAP1Q96SZ6 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.21□□□□□ -1.58
CDK5RAP1Q96SZ6 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC5.21□□□□□ -1.58
CDK5RAP1Q96SZ6 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC5.21□□□□□ -1.58
CDK5RAP1Q96SZ6 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC5.21□□□□□ -1.58
CDK5RAP1Q96SZ6 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC5.21□□□□□ -1.58
CDK5RAP1Q96SZ6 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.21□□□□□ -1.58
CDK5RAP1Q96SZ6 MIR4472-2-201ENST00000582069 67 ntBASIC5.21□□□□□ -1.58
CDK5RAP1Q96SZ6 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.21□□□□□ -1.58
CDK5RAP1Q96SZ6 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.21□□□□□ -1.58
CDK5RAP1Q96SZ6 AC010680.3-201ENST00000604215 520 ntBASIC5.21□□□□□ -1.58
CDK5RAP1Q96SZ6 AC009220.3-201ENST00000604318 586 ntBASIC5.21□□□□□ -1.58
CDK5RAP1Q96SZ6 AL162730.1-201ENST00000605734 292 ntBASIC5.21□□□□□ -1.58
CDK5RAP1Q96SZ6 AC012557.1-201ENST00000607115 611 ntBASIC5.21□□□□□ -1.58
CDK5RAP1Q96SZ6 Z98200.1-201ENST00000607298 470 ntBASIC5.21□□□□□ -1.58
CDK5RAP1Q96SZ6 AC099676.1-201ENST00000608886 657 ntBASIC5.21□□□□□ -1.58
CDK5RAP1Q96SZ6 AC093838.1-201ENST00000613014 469 ntBASIC5.21□□□□□ -1.58
CDK5RAP1Q96SZ6 AC023158.2-201ENST00000614876 543 ntBASIC5.21□□□□□ -1.58
CDK5RAP1Q96SZ6 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC5.21□□□□□ -1.58
CDK5RAP1Q96SZ6 AC018816.2-201ENST00000621460 353 ntBASIC5.21□□□□□ -1.58
CDK5RAP1Q96SZ6 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.21□□□□□ -1.58
CDK5RAP1Q96SZ6 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
CDK5RAP1Q96SZ6 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CDK5RAP1Q96SZ6 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.21□□□□□ -1.58
CDK5RAP1Q96SZ6 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.21□□□□□ -1.58
CDK5RAP1Q96SZ6 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
CDK5RAP1Q96SZ6 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.21□□□□□ -1.58
CDK5RAP1Q96SZ6 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CDK5RAP1Q96SZ6 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CDK5RAP1Q96SZ6 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
CDK5RAP1Q96SZ6 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.2□□□□□ -1.58
CDK5RAP1Q96SZ6 AC132825.1-201ENST00000463573 2247 ntBASIC5.2□□□□□ -1.58
CDK5RAP1Q96SZ6 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.2□□□□□ -1.58
CDK5RAP1Q96SZ6 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CDK5RAP1Q96SZ6 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CDK5RAP1Q96SZ6 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CDK5RAP1Q96SZ6 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CDK5RAP1Q96SZ6 AC011755.1-201ENST00000623763 2049 ntBASIC5.2□□□□□ -1.58
CDK5RAP1Q96SZ6 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CDK5RAP1Q96SZ6 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CDK5RAP1Q96SZ6 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CDK5RAP1Q96SZ6 Y_RNA.295-201ENST00000364918 102 ntBASIC5.2□□□□□ -1.58
CDK5RAP1Q96SZ6 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CDK5RAP1Q96SZ6 SNORA70.10-201ENST00000384515 134 ntBASIC5.2□□□□□ -1.58
CDK5RAP1Q96SZ6 MIR937-201ENST00000401271 86 ntBASIC5.2□□□□□ -1.58
CDK5RAP1Q96SZ6 FAT1P1-201ENST00000406588 507 ntBASIC5.2□□□□□ -1.58
CDK5RAP1Q96SZ6 CTSL3P-202ENST00000412179 788 ntBASIC5.2□□□□□ -1.58
CDK5RAP1Q96SZ6 NPM1P40-201ENST00000412758 733 ntBASIC5.2□□□□□ -1.58
CDK5RAP1Q96SZ6 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC5.2□□□□□ -1.58
CDK5RAP1Q96SZ6 AF186996.5-201ENST00000418098 904 ntBASIC5.2□□□□□ -1.58
CDK5RAP1Q96SZ6 OR2AM1P-201ENST00000422137 422 ntBASIC5.2□□□□□ -1.58
CDK5RAP1Q96SZ6 AL590762.4-201ENST00000425885 253 ntBASIC5.2□□□□□ -1.58
CDK5RAP1Q96SZ6 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC5.2□□□□□ -1.58
CDK5RAP1Q96SZ6 RPL7P11-201ENST00000437586 658 ntBASIC5.2□□□□□ -1.58
CDK5RAP1Q96SZ6 AC006466.1-201ENST00000438721 289 ntBASIC5.2□□□□□ -1.58
CDK5RAP1Q96SZ6 AC244505.5-201ENST00000443639 207 ntBASIC5.2□□□□□ -1.58
CDK5RAP1Q96SZ6 AC112498.1-201ENST00000444401 332 ntBASIC5.2□□□□□ -1.58
CDK5RAP1Q96SZ6 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC5.2□□□□□ -1.58
CDK5RAP1Q96SZ6 CYCSP24-201ENST00000445119 316 ntBASIC5.2□□□□□ -1.58
CDK5RAP1Q96SZ6 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 138.4 ms