Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 MIR200C-201ENST00000384980 68 ntBASIC3.62□□□□□ -1.83
ECHDC3Q96DC8 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.62□□□□□ -1.83
ECHDC3Q96DC8 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.62□□□□□ -1.83
ECHDC3Q96DC8 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.62□□□□□ -1.83
ECHDC3Q96DC8 RNU6-775P-201ENST00000459318 96 ntBASIC3.62□□□□□ -1.83
ECHDC3Q96DC8 AC007537.2-201ENST00000472093 511 ntBASIC3.62□□□□□ -1.83
ECHDC3Q96DC8 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
ECHDC3Q96DC8 AC006499.5-201ENST00000505037 514 ntBASIC3.62□□□□□ -1.83
ECHDC3Q96DC8 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.62□□□□□ -1.83
ECHDC3Q96DC8 AC110792.2-201ENST00000510278 224 ntBASIC3.62□□□□□ -1.83
ECHDC3Q96DC8 NARSP2-201ENST00000518524 679 ntBASIC3.62□□□□□ -1.83
ECHDC3Q96DC8 IGKV2-23-201ENST00000518729 323 ntBASIC3.62□□□□□ -1.83
ECHDC3Q96DC8 HMGB1P46-201ENST00000520062 610 ntBASIC3.62□□□□□ -1.83
ECHDC3Q96DC8 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.62□□□□□ -1.83
ECHDC3Q96DC8 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.62□□□□□ -1.83
ECHDC3Q96DC8 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.62□□□□□ -1.83
ECHDC3Q96DC8 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC3.62□□□□□ -1.83
ECHDC3Q96DC8 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.62□□□□□ -1.83
ECHDC3Q96DC8 PCNAP1-202ENST00000595299 752 ntBASIC3.62□□□□□ -1.83
ECHDC3Q96DC8 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
ECHDC3Q96DC8 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.61□□□□□ -1.83
ECHDC3Q96DC8 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
ECHDC3Q96DC8 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.61□□□□□ -1.83
ECHDC3Q96DC8 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.61□□□□□ -1.83
ECHDC3Q96DC8 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
ECHDC3Q96DC8 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
ECHDC3Q96DC8 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.61□□□□□ -1.83
ECHDC3Q96DC8 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC3.61□□□□□ -1.83
ECHDC3Q96DC8 XKRY2-201ENST00000442362 1093 ntBASIC3.61□□□□□ -1.83
ECHDC3Q96DC8 CEACAMP4-201ENST00000457676 421 ntBASIC3.61□□□□□ -1.83
ECHDC3Q96DC8 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.61□□□□□ -1.83
ECHDC3Q96DC8 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.61□□□□□ -1.83
ECHDC3Q96DC8 RN7SKP13-201ENST00000515933 244 ntBASIC3.61□□□□□ -1.83
ECHDC3Q96DC8 RN7SKP157-201ENST00000516174 282 ntBASIC3.61□□□□□ -1.83
ECHDC3Q96DC8 RNU2-58P-201ENST00000516403 183 ntBASIC3.61□□□□□ -1.83
ECHDC3Q96DC8 RN7SKP83-201ENST00000516512 178 ntBASIC3.61□□□□□ -1.83
ECHDC3Q96DC8 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.61□□□□□ -1.83
ECHDC3Q96DC8 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.61□□□□□ -1.83
ECHDC3Q96DC8 IGKV2D-19-201ENST00000523346 262 ntBASIC3.61□□□□□ -1.83
ECHDC3Q96DC8 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.61□□□□□ -1.83
ECHDC3Q96DC8 AC067805.1-201ENST00000559344 470 ntBASIC3.61□□□□□ -1.83
ECHDC3Q96DC8 AC141257.3-201ENST00000572906 215 ntBASIC3.61□□□□□ -1.83
ECHDC3Q96DC8 AC010591.1-201ENST00000603941 649 ntBASIC3.61□□□□□ -1.83
ECHDC3Q96DC8 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.61□□□□□ -1.83
ECHDC3Q96DC8 AC105429.2-201ENST00000610567 517 ntBASIC3.61□□□□□ -1.83
ECHDC3Q96DC8 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
ECHDC3Q96DC8 AC121761.2-201ENST00000617300 689 ntBASIC3.61□□□□□ -1.83
ECHDC3Q96DC8 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC3.61□□□□□ -1.83
ECHDC3Q96DC8 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
ECHDC3Q96DC8 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.61□□□□□ -1.83
ECHDC3Q96DC8 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
ECHDC3Q96DC8 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
ECHDC3Q96DC8 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.61□□□□□ -1.83
ECHDC3Q96DC8 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
ECHDC3Q96DC8 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
ECHDC3Q96DC8 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
ECHDC3Q96DC8 RNA5SP42-201ENST00000364278 115 ntBASIC3.6□□□□□ -1.83
ECHDC3Q96DC8 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.6□□□□□ -1.83
ECHDC3Q96DC8 AL590290.1-201ENST00000405336 380 ntBASIC3.6□□□□□ -1.83
ECHDC3Q96DC8 AL589655.1-201ENST00000405398 482 ntBASIC3.6□□□□□ -1.83
ECHDC3Q96DC8 U3.39-201ENST00000408569 239 ntBASIC3.6□□□□□ -1.83
ECHDC3Q96DC8 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.6□□□□□ -1.83
ECHDC3Q96DC8 AL590623.1-201ENST00000427864 105 ntBASIC3.6□□□□□ -1.83
ECHDC3Q96DC8 HSPD1P21-201ENST00000436541 245 ntBASIC3.6□□□□□ -1.83
ECHDC3Q96DC8 SKP1P1-201ENST00000438081 489 ntBASIC3.6□□□□□ -1.83
ECHDC3Q96DC8 AL138799.3-201ENST00000438968 350 ntBASIC3.6□□□□□ -1.83
ECHDC3Q96DC8 RPL21P23-201ENST00000446654 460 ntBASIC3.6□□□□□ -1.83
ECHDC3Q96DC8 VN1R34P-201ENST00000447387 883 ntBASIC3.6□□□□□ -1.83
ECHDC3Q96DC8 PPIAP3-201ENST00000450588 505 ntBASIC3.6□□□□□ -1.83
ECHDC3Q96DC8 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.6□□□□□ -1.83
ECHDC3Q96DC8 RBMY2UP-201ENST00000453474 324 ntBASIC3.6□□□□□ -1.83
ECHDC3Q96DC8 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
ECHDC3Q96DC8 CFTRP1-201ENST00000456646 183 ntBASIC3.6□□□□□ -1.83
ECHDC3Q96DC8 AC010307.1-201ENST00000467206 836 ntBASIC3.6□□□□□ -1.83
ECHDC3Q96DC8 RPL23AP73-201ENST00000492507 471 ntBASIC3.6□□□□□ -1.83
ECHDC3Q96DC8 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.6□□□□□ -1.83
ECHDC3Q96DC8 RPL7P47-201ENST00000497299 556 ntBASIC3.6□□□□□ -1.83
ECHDC3Q96DC8 MTCO1P31-201ENST00000506355 492 ntBASIC3.6□□□□□ -1.83
ECHDC3Q96DC8 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.6□□□□□ -1.83
ECHDC3Q96DC8 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.6□□□□□ -1.83
ECHDC3Q96DC8 SNORA70.18-201ENST00000516696 98 ntBASIC3.6□□□□□ -1.83
ECHDC3Q96DC8 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.6□□□□□ -1.83
ECHDC3Q96DC8 IGKV2-36-201ENST00000519999 223 ntBASIC3.6□□□□□ -1.83
ECHDC3Q96DC8 CCNG2P1-201ENST00000549521 1000 ntBASIC3.6□□□□□ -1.83
ECHDC3Q96DC8 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.6□□□□□ -1.83
ECHDC3Q96DC8 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.6□□□□□ -1.83
ECHDC3Q96DC8 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.6□□□□□ -1.83
ECHDC3Q96DC8 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.6□□□□□ -1.83
ECHDC3Q96DC8 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.6□□□□□ -1.83
ECHDC3Q96DC8 AC006077.1-201ENST00000604746 343 ntBASIC3.6□□□□□ -1.83
ECHDC3Q96DC8 AC110792.4-201ENST00000609843 298 ntBASIC3.6□□□□□ -1.83
ECHDC3Q96DC8 AC104820.1-201ENST00000624183 307 ntBASIC3.6□□□□□ -1.83
ECHDC3Q96DC8 AC024023.1-201ENST00000624530 922 ntBASIC3.6□□□□□ -1.83
ECHDC3Q96DC8 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.6□□□□□ -1.83
ECHDC3Q96DC8 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.6□□□□□ -1.83
ECHDC3Q96DC8 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
ECHDC3Q96DC8 MTND4P31-201ENST00000425607 1343 ntBASIC3.6□□□□□ -1.83
ECHDC3Q96DC8 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.6□□□□□ -1.83
ECHDC3Q96DC8 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
ECHDC3Q96DC8 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 150.5 ms