Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AC091946.2-201ENST00000606105 291 ntBASIC5.48□□□□□ -1.53
CHMP4CQ96CF2 AC245297.2-201ENST00000610119 565 ntBASIC5.48□□□□□ -1.53
CHMP4CQ96CF2 AL121873.1-201ENST00000616013 524 ntBASIC5.48□□□□□ -1.53
CHMP4CQ96CF2 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC5.48□□□□□ -1.53
CHMP4CQ96CF2 AC098679.5-201ENST00000624394 571 ntBASIC5.48□□□□□ -1.53
CHMP4CQ96CF2 AC010608.2-201ENST00000624830 470 ntBASIC5.48□□□□□ -1.53
CHMP4CQ96CF2 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CHMP4CQ96CF2 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
CHMP4CQ96CF2 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CHMP4CQ96CF2 AC090971.4-201ENST00000560291 1800 ntBASIC5.48□□□□□ -1.53
CHMP4CQ96CF2 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC5.48□□□□□ -1.53
CHMP4CQ96CF2 FER-202ENST00000438717 1531 ntTSL 2 BASIC5.48□□□□□ -1.53
CHMP4CQ96CF2 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CHMP4CQ96CF2 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC5.48□□□□□ -1.53
CHMP4CQ96CF2 ZNF542P-204ENST00000482727 1305 ntBASIC5.48□□□□□ -1.53
CHMP4CQ96CF2 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CHMP4CQ96CF2 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CHMP4CQ96CF2 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CHMP4CQ96CF2 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.47□□□□□ -1.53
CHMP4CQ96CF2 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.47□□□□□ -1.53
CHMP4CQ96CF2 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CHMP4CQ96CF2 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
CHMP4CQ96CF2 OR4A15-201ENST00000314706 1035 ntBASIC5.47□□□□□ -1.53
CHMP4CQ96CF2 RNU6-931P-201ENST00000363850 107 ntBASIC5.47□□□□□ -1.53
CHMP4CQ96CF2 RNU6-1122P-201ENST00000384449 107 ntBASIC5.47□□□□□ -1.53
CHMP4CQ96CF2 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.47□□□□□ -1.53
CHMP4CQ96CF2 AC068533.2-201ENST00000411872 306 ntBASIC5.47□□□□□ -1.53
CHMP4CQ96CF2 USP9YP26-201ENST00000421008 661 ntBASIC5.47□□□□□ -1.53
CHMP4CQ96CF2 AL365203.2-201ENST00000423444 196 ntBASIC5.47□□□□□ -1.53
CHMP4CQ96CF2 RPS12P5-201ENST00000423449 371 ntBASIC5.47□□□□□ -1.53
CHMP4CQ96CF2 AL022400.1-201ENST00000423946 935 ntBASIC5.47□□□□□ -1.53
CHMP4CQ96CF2 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC5.47□□□□□ -1.53
CHMP4CQ96CF2 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC5.47□□□□□ -1.53
CHMP4CQ96CF2 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC5.47□□□□□ -1.53
CHMP4CQ96CF2 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC5.47□□□□□ -1.53
CHMP4CQ96CF2 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC5.47□□□□□ -1.53
CHMP4CQ96CF2 RNU7-125P-201ENST00000458760 62 ntBASIC5.47□□□□□ -1.53
CHMP4CQ96CF2 AK3P4-201ENST00000504283 583 ntBASIC5.47□□□□□ -1.53
CHMP4CQ96CF2 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC5.47□□□□□ -1.53
CHMP4CQ96CF2 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC5.47□□□□□ -1.53
CHMP4CQ96CF2 AC110792.2-201ENST00000510278 224 ntBASIC5.47□□□□□ -1.53
CHMP4CQ96CF2 Y_RNA.688-201ENST00000516565 95 ntBASIC5.47□□□□□ -1.53
CHMP4CQ96CF2 OR5AK1P-201ENST00000524837 922 ntBASIC5.47□□□□□ -1.53
CHMP4CQ96CF2 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CHMP4CQ96CF2 REXO2-218ENST00000544827 880 ntTSL 3 BASIC5.47□□□□□ -1.53
CHMP4CQ96CF2 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC5.47□□□□□ -1.53
CHMP4CQ96CF2 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.47□□□□□ -1.53
CHMP4CQ96CF2 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC5.47□□□□□ -1.53
CHMP4CQ96CF2 AL512347.1-201ENST00000566420 503 ntBASIC5.47□□□□□ -1.53
CHMP4CQ96CF2 AC109446.2-201ENST00000567872 497 ntBASIC5.47□□□□□ -1.53
CHMP4CQ96CF2 AC015912.2-201ENST00000571053 181 ntBASIC5.47□□□□□ -1.53
CHMP4CQ96CF2 MIR4512-201ENST00000583257 77 ntBASIC5.47□□□□□ -1.53
CHMP4CQ96CF2 AC091178.1-203ENST00000584586 279 ntBASIC5.47□□□□□ -1.53
CHMP4CQ96CF2 MIR4999-201ENST00000585029 91 ntBASIC5.47□□□□□ -1.53
CHMP4CQ96CF2 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5.47□□□□□ -1.53
CHMP4CQ96CF2 RPL7P50-201ENST00000600588 727 ntBASIC5.47□□□□□ -1.53
CHMP4CQ96CF2 RPL26P30-202ENST00000602923 645 ntBASIC5.47□□□□□ -1.53
CHMP4CQ96CF2 AL607023.1-201ENST00000620045 248 ntBASIC5.47□□□□□ -1.53
CHMP4CQ96CF2 AC120349.2-201ENST00000625002 298 ntBASIC5.47□□□□□ -1.53
CHMP4CQ96CF2 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
CHMP4CQ96CF2 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.47□□□□□ -1.53
CHMP4CQ96CF2 AC010300.1-201ENST00000600671 5134 ntBASIC5.47□□□□□ -1.53
CHMP4CQ96CF2 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CHMP4CQ96CF2 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CHMP4CQ96CF2 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.53
CHMP4CQ96CF2 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
CHMP4CQ96CF2 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.53
CHMP4CQ96CF2 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC5.46□□□□□ -1.53
CHMP4CQ96CF2 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.46□□□□□ -1.53
CHMP4CQ96CF2 AP000526.1-201ENST00000603308 1388 ntBASIC5.46□□□□□ -1.54
CHMP4CQ96CF2 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CHMP4CQ96CF2 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
CHMP4CQ96CF2 RNU6-921P-201ENST00000384361 107 ntBASIC5.46□□□□□ -1.54
CHMP4CQ96CF2 MIR506-201ENST00000384998 124 ntBASIC5.46□□□□□ -1.54
CHMP4CQ96CF2 AC136624.1-201ENST00000400791 413 ntBASIC5.46□□□□□ -1.54
CHMP4CQ96CF2 AC009518.2-201ENST00000418056 731 ntBASIC5.46□□□□□ -1.54
CHMP4CQ96CF2 AL365338.1-201ENST00000422282 858 ntBASIC5.46□□□□□ -1.54
CHMP4CQ96CF2 Z74021.1-201ENST00000423610 407 ntBASIC5.46□□□□□ -1.54
CHMP4CQ96CF2 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CHMP4CQ96CF2 NIPA2P1-201ENST00000426223 976 ntBASIC5.46□□□□□ -1.54
CHMP4CQ96CF2 AC096632.1-201ENST00000427395 310 ntBASIC5.46□□□□□ -1.54
CHMP4CQ96CF2 C4BPAP2-201ENST00000428434 478 ntBASIC5.46□□□□□ -1.54
CHMP4CQ96CF2 VDAC1P6-201ENST00000430062 855 ntBASIC5.46□□□□□ -1.54
CHMP4CQ96CF2 UBE2V1P1-201ENST00000430836 445 ntBASIC5.46□□□□□ -1.54
CHMP4CQ96CF2 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC5.46□□□□□ -1.54
CHMP4CQ96CF2 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CHMP4CQ96CF2 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.46□□□□□ -1.54
CHMP4CQ96CF2 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.46□□□□□ -1.54
CHMP4CQ96CF2 AL591503.2-201ENST00000442314 1005 ntBASIC5.46□□□□□ -1.54
CHMP4CQ96CF2 AL513533.1-201ENST00000453728 415 ntBASIC5.46□□□□□ -1.54
CHMP4CQ96CF2 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC5.46□□□□□ -1.54
CHMP4CQ96CF2 RPL21P126-201ENST00000470049 478 ntBASIC5.46□□□□□ -1.54
CHMP4CQ96CF2 OR4G11P-201ENST00000492842 939 ntBASIC5.46□□□□□ -1.54
CHMP4CQ96CF2 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC5.46□□□□□ -1.54
CHMP4CQ96CF2 HMGB1P28-201ENST00000507778 552 ntBASIC5.46□□□□□ -1.54
CHMP4CQ96CF2 AC105313.1-201ENST00000509121 353 ntBASIC5.46□□□□□ -1.54
CHMP4CQ96CF2 MTND1P22-201ENST00000510572 951 ntBASIC5.46□□□□□ -1.54
CHMP4CQ96CF2 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CHMP4CQ96CF2 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC5.46□□□□□ -1.54
CHMP4CQ96CF2 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms