Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC079587.1-201ENST00000603846 277 ntBASIC4.11□□□□□ -1.75
VPS33AQ96AX1 AC025588.3-201ENST00000604182 274 ntBASIC4.11□□□□□ -1.75
VPS33AQ96AX1 AP000894.4-201ENST00000610185 483 ntBASIC4.11□□□□□ -1.75
VPS33AQ96AX1 AC090116.1-201ENST00000615679 446 ntBASIC4.11□□□□□ -1.75
VPS33AQ96AX1 MIR6719-201ENST00000622428 87 ntBASIC4.11□□□□□ -1.75
VPS33AQ96AX1 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.11□□□□□ -1.75
VPS33AQ96AX1 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
VPS33AQ96AX1 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.11□□□□□ -1.75
VPS33AQ96AX1 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
VPS33AQ96AX1 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
VPS33AQ96AX1 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
VPS33AQ96AX1 AC131971.1-201ENST00000332881 1482 ntBASIC4.11□□□□□ -1.75
VPS33AQ96AX1 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
VPS33AQ96AX1 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
VPS33AQ96AX1 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
VPS33AQ96AX1 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VPS33AQ96AX1 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
VPS33AQ96AX1 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.1□□□□□ -1.75
VPS33AQ96AX1 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.1□□□□□ -1.75
VPS33AQ96AX1 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
VPS33AQ96AX1 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.1□□□□□ -1.75
VPS33AQ96AX1 AC008033.1-201ENST00000216407 1162 ntBASIC4.1□□□□□ -1.75
VPS33AQ96AX1 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
VPS33AQ96AX1 RNU6-837P-201ENST00000391056 108 ntBASIC4.1□□□□□ -1.75
VPS33AQ96AX1 RN7SKP278-201ENST00000410504 342 ntBASIC4.1□□□□□ -1.75
VPS33AQ96AX1 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.1□□□□□ -1.75
VPS33AQ96AX1 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC4.1□□□□□ -1.75
VPS33AQ96AX1 RPL7AP25-201ENST00000423357 805 ntBASIC4.1□□□□□ -1.75
VPS33AQ96AX1 VDAC1P6-201ENST00000430062 855 ntBASIC4.1□□□□□ -1.75
VPS33AQ96AX1 AL356276.2-201ENST00000435919 558 ntBASIC4.1□□□□□ -1.75
VPS33AQ96AX1 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.1□□□□□ -1.75
VPS33AQ96AX1 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.1□□□□□ -1.75
VPS33AQ96AX1 TVP23BP2-201ENST00000455082 615 ntBASIC4.1□□□□□ -1.75
VPS33AQ96AX1 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC4.1□□□□□ -1.75
VPS33AQ96AX1 AC053481.1-201ENST00000467217 306 ntBASIC4.1□□□□□ -1.75
VPS33AQ96AX1 WDR78-207ENST00000488333 613 ntTSL 3 BASIC4.1□□□□□ -1.75
VPS33AQ96AX1 RN7SL812P-201ENST00000493791 279 ntBASIC4.1□□□□□ -1.75
VPS33AQ96AX1 AC104164.2-201ENST00000496953 495 ntBASIC4.1□□□□□ -1.75
VPS33AQ96AX1 RPL21P131-201ENST00000497298 483 ntBASIC4.1□□□□□ -1.75
VPS33AQ96AX1 AC105233.1-201ENST00000498840 781 ntBASIC4.1□□□□□ -1.75
VPS33AQ96AX1 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.1□□□□□ -1.75
VPS33AQ96AX1 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.1□□□□□ -1.75
VPS33AQ96AX1 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.1□□□□□ -1.75
VPS33AQ96AX1 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.1□□□□□ -1.75
VPS33AQ96AX1 AC021451.1-201ENST00000523498 1129 ntBASIC4.1□□□□□ -1.75
VPS33AQ96AX1 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.1□□□□□ -1.75
VPS33AQ96AX1 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.1□□□□□ -1.75
VPS33AQ96AX1 AC044860.2-201ENST00000561005 179 ntBASIC4.1□□□□□ -1.75
VPS33AQ96AX1 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC4.1□□□□□ -1.75
VPS33AQ96AX1 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.1□□□□□ -1.75
VPS33AQ96AX1 MIR4436B2-201ENST00000581415 91 ntBASIC4.1□□□□□ -1.75
VPS33AQ96AX1 MIR4436B1-201ENST00000583272 91 ntBASIC4.1□□□□□ -1.75
VPS33AQ96AX1 AL669831.4-202ENST00000590817 238 ntBASIC4.1□□□□□ -1.75
VPS33AQ96AX1 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.1□□□□□ -1.75
VPS33AQ96AX1 AP001160.4-201ENST00000596971 382 ntBASIC4.1□□□□□ -1.75
VPS33AQ96AX1 DPRXP5-201ENST00000604662 539 ntBASIC4.1□□□□□ -1.75
VPS33AQ96AX1 AL354984.3-201ENST00000604803 325 ntBASIC4.1□□□□□ -1.75
VPS33AQ96AX1 HMGB1P50-201ENST00000605814 607 ntBASIC4.1□□□□□ -1.75
VPS33AQ96AX1 AC091946.2-201ENST00000606105 291 ntBASIC4.1□□□□□ -1.75
VPS33AQ96AX1 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.1□□□□□ -1.75
VPS33AQ96AX1 AC092954.1-201ENST00000609121 445 ntBASIC4.1□□□□□ -1.75
VPS33AQ96AX1 AC064801.1-201ENST00000612025 407 ntBASIC4.1□□□□□ -1.75
VPS33AQ96AX1 AL021997.2-201ENST00000615674 271 ntBASIC4.1□□□□□ -1.75
VPS33AQ96AX1 AL713922.2-201ENST00000619384 716 ntBASIC4.1□□□□□ -1.75
VPS33AQ96AX1 AC008785.1-201ENST00000624475 456 ntBASIC4.1□□□□□ -1.75
VPS33AQ96AX1 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.1□□□□□ -1.75
VPS33AQ96AX1 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.1□□□□□ -1.75
VPS33AQ96AX1 AF001550.2-201ENST00000636643 217 ntBASIC4.1□□□□□ -1.75
VPS33AQ96AX1 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
VPS33AQ96AX1 LINC02471-203ENST00000641941 4752 ntBASIC4.1□□□□□ -1.75
VPS33AQ96AX1 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
VPS33AQ96AX1 AL157700.1-201ENST00000561973 1432 ntBASIC4.1□□□□□ -1.75
VPS33AQ96AX1 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.1□□□□□ -1.75
VPS33AQ96AX1 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
VPS33AQ96AX1 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
VPS33AQ96AX1 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
VPS33AQ96AX1 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
VPS33AQ96AX1 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
VPS33AQ96AX1 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
VPS33AQ96AX1 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
VPS33AQ96AX1 RNVU1-3-201ENST00000364313 161 ntBASIC4.09□□□□□ -1.75
VPS33AQ96AX1 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
VPS33AQ96AX1 SNORA70F-201ENST00000384142 135 ntBASIC4.09□□□□□ -1.75
VPS33AQ96AX1 AL024474.1-201ENST00000404655 591 ntBASIC4.09□□□□□ -1.75
VPS33AQ96AX1 RSL24D1P1-201ENST00000404972 493 ntBASIC4.09□□□□□ -1.75
VPS33AQ96AX1 MIR1183-201ENST00000408856 89 ntBASIC4.09□□□□□ -1.75
VPS33AQ96AX1 LUZP4P1-201ENST00000415420 344 ntBASIC4.09□□□□□ -1.75
VPS33AQ96AX1 OR4K6P-201ENST00000416478 897 ntBASIC4.09□□□□□ -1.75
VPS33AQ96AX1 AL449283.1-202ENST00000418249 604 ntBASIC4.09□□□□□ -1.75
VPS33AQ96AX1 AC007435.1-201ENST00000421086 415 ntBASIC4.09□□□□□ -1.75
VPS33AQ96AX1 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC4.09□□□□□ -1.75
VPS33AQ96AX1 AL132765.1-201ENST00000434165 553 ntBASIC4.09□□□□□ -1.75
VPS33AQ96AX1 AC093155.1-201ENST00000440164 826 ntBASIC4.09□□□□□ -1.75
VPS33AQ96AX1 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.09□□□□□ -1.75
VPS33AQ96AX1 AC112492.1-201ENST00000449607 712 ntBASIC4.09□□□□□ -1.75
VPS33AQ96AX1 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.09□□□□□ -1.75
VPS33AQ96AX1 DHFRP3-201ENST00000455595 559 ntBASIC4.09□□□□□ -1.75
VPS33AQ96AX1 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.09□□□□□ -1.75
VPS33AQ96AX1 RN7SL329P-201ENST00000467740 299 ntBASIC4.09□□□□□ -1.75
VPS33AQ96AX1 AL136126.1-201ENST00000473603 402 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms