Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 RBM6-203ENST00000421682 684 ntTSL 2 BASIC6.52□□□□□ -1.37
NEDD1Q8NHV4 SKP1P3-201ENST00000429280 487 ntBASIC6.52□□□□□ -1.37
NEDD1Q8NHV4 H3F3BP1-201ENST00000440551 403 ntBASIC6.52□□□□□ -1.37
NEDD1Q8NHV4 FAM103A2P-201ENST00000444122 354 ntBASIC6.52□□□□□ -1.37
NEDD1Q8NHV4 AL392103.1-201ENST00000447000 198 ntBASIC6.52□□□□□ -1.37
NEDD1Q8NHV4 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC6.52□□□□□ -1.37
NEDD1Q8NHV4 CALM1P2-201ENST00000452941 448 ntBASIC6.52□□□□□ -1.37
NEDD1Q8NHV4 RN7SL51P-201ENST00000468230 285 ntBASIC6.52□□□□□ -1.37
NEDD1Q8NHV4 ATP5LP5-201ENST00000483050 299 ntBASIC6.52□□□□□ -1.37
NEDD1Q8NHV4 AC073522.1-201ENST00000483312 377 ntBASIC6.52□□□□□ -1.37
NEDD1Q8NHV4 AC006390.1-201ENST00000508068 283 ntBASIC6.52□□□□□ -1.37
NEDD1Q8NHV4 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC6.52□□□□□ -1.37
NEDD1Q8NHV4 AC013828.2-201ENST00000532487 235 ntBASIC6.52□□□□□ -1.37
NEDD1Q8NHV4 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC6.52□□□□□ -1.37
NEDD1Q8NHV4 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC6.52□□□□□ -1.37
NEDD1Q8NHV4 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC6.52□□□□□ -1.37
NEDD1Q8NHV4 FKBP1AP1-201ENST00000594588 318 ntBASIC6.52□□□□□ -1.37
NEDD1Q8NHV4 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC6.52□□□□□ -1.37
NEDD1Q8NHV4 CKS1BP3-201ENST00000600888 237 ntBASIC6.52□□□□□ -1.37
NEDD1Q8NHV4 IMMP1LP3-201ENST00000604197 224 ntBASIC6.52□□□□□ -1.37
NEDD1Q8NHV4 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC6.52□□□□□ -1.37
NEDD1Q8NHV4 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
NEDD1Q8NHV4 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC6.52□□□□□ -1.37
NEDD1Q8NHV4 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
NEDD1Q8NHV4 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
NEDD1Q8NHV4 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
NEDD1Q8NHV4 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
NEDD1Q8NHV4 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
NEDD1Q8NHV4 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
NEDD1Q8NHV4 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
NEDD1Q8NHV4 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC6.52□□□□□ -1.37
NEDD1Q8NHV4 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
NEDD1Q8NHV4 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
NEDD1Q8NHV4 OR5BR1P-201ENST00000524992 1330 ntBASIC6.51□□□□□ -1.37
NEDD1Q8NHV4 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
NEDD1Q8NHV4 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.51□□□□□ -1.37
NEDD1Q8NHV4 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
NEDD1Q8NHV4 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
NEDD1Q8NHV4 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.51□□□□□ -1.37
NEDD1Q8NHV4 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
NEDD1Q8NHV4 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
NEDD1Q8NHV4 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.51□□□□□ -1.37
NEDD1Q8NHV4 AC073343.1-201ENST00000328239 651 ntBASIC6.51□□□□□ -1.37
NEDD1Q8NHV4 Y_RNA.135-201ENST00000363439 95 ntBASIC6.51□□□□□ -1.37
NEDD1Q8NHV4 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
NEDD1Q8NHV4 RNU6-831P-201ENST00000384548 107 ntBASIC6.51□□□□□ -1.37
NEDD1Q8NHV4 RNU6-1300P-201ENST00000391046 108 ntBASIC6.51□□□□□ -1.37
NEDD1Q8NHV4 MIR548I2-201ENST00000408348 149 ntBASIC6.51□□□□□ -1.37
NEDD1Q8NHV4 Z93019.1-201ENST00000416450 973 ntBASIC6.51□□□□□ -1.37
NEDD1Q8NHV4 RPS26P13-201ENST00000419030 330 ntBASIC6.51□□□□□ -1.37
NEDD1Q8NHV4 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC6.51□□□□□ -1.37
NEDD1Q8NHV4 OR51AB1P-201ENST00000429046 620 ntBASIC6.51□□□□□ -1.37
NEDD1Q8NHV4 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC6.51□□□□□ -1.37
NEDD1Q8NHV4 HMGB3P22-202ENST00000451823 572 ntBASIC6.51□□□□□ -1.37
NEDD1Q8NHV4 AL645937.3-201ENST00000453647 936 ntBASIC6.51□□□□□ -1.37
NEDD1Q8NHV4 APOOP2-201ENST00000461561 539 ntBASIC6.51□□□□□ -1.37
NEDD1Q8NHV4 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC6.51□□□□□ -1.37
NEDD1Q8NHV4 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC6.51□□□□□ -1.37
NEDD1Q8NHV4 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC6.51□□□□□ -1.37
NEDD1Q8NHV4 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC6.51□□□□□ -1.37
NEDD1Q8NHV4 AC104986.1-201ENST00000517978 436 ntBASIC6.51□□□□□ -1.37
NEDD1Q8NHV4 IGKV2-19-201ENST00000518132 283 ntBASIC6.51□□□□□ -1.37
NEDD1Q8NHV4 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.51□□□□□ -1.37
NEDD1Q8NHV4 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC6.51□□□□□ -1.37
NEDD1Q8NHV4 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC6.51□□□□□ -1.37
NEDD1Q8NHV4 AL137100.2-201ENST00000555786 315 ntBASIC6.51□□□□□ -1.37
NEDD1Q8NHV4 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC6.51□□□□□ -1.37
NEDD1Q8NHV4 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC6.51□□□□□ -1.37
NEDD1Q8NHV4 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC6.51□□□□□ -1.37
NEDD1Q8NHV4 MIR98-201ENST00000606724 119 ntBASIC6.51□□□□□ -1.37
NEDD1Q8NHV4 AC000068.2-201ENST00000608816 460 ntBASIC6.51□□□□□ -1.37
NEDD1Q8NHV4 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6.51□□□□□ -1.37
NEDD1Q8NHV4 AC099494.2-201ENST00000623371 978 ntBASIC6.51□□□□□ -1.37
NEDD1Q8NHV4 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC6.51□□□□□ -1.37
NEDD1Q8NHV4 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
NEDD1Q8NHV4 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
NEDD1Q8NHV4 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.51□□□□□ -1.37
NEDD1Q8NHV4 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
NEDD1Q8NHV4 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
NEDD1Q8NHV4 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
NEDD1Q8NHV4 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
NEDD1Q8NHV4 AL591135.1-201ENST00000401578 5914 ntBASIC6.51□□□□□ -1.37
NEDD1Q8NHV4 AC068870.1-201ENST00000563737 2455 ntBASIC6.51□□□□□ -1.37
NEDD1Q8NHV4 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
NEDD1Q8NHV4 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
NEDD1Q8NHV4 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC6.5□□□□□ -1.37
NEDD1Q8NHV4 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
NEDD1Q8NHV4 TOPORSLP1-201ENST00000467693 2102 ntBASIC6.5□□□□□ -1.37
NEDD1Q8NHV4 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.5□□□□□ -1.37
NEDD1Q8NHV4 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.5□□□□□ -1.37
NEDD1Q8NHV4 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
NEDD1Q8NHV4 AC020656.2-201ENST00000613291 5309 ntBASIC6.5□□□□□ -1.37
NEDD1Q8NHV4 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
NEDD1Q8NHV4 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
NEDD1Q8NHV4 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
NEDD1Q8NHV4 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC6.5□□□□□ -1.37
NEDD1Q8NHV4 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
NEDD1Q8NHV4 Y_RNA.574-201ENST00000384766 95 ntBASIC6.5□□□□□ -1.37
NEDD1Q8NHV4 MTCYBP4-201ENST00000401524 249 ntBASIC6.5□□□□□ -1.37
NEDD1Q8NHV4 AL109755.1-201ENST00000401791 649 ntBASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms