Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 AC073348.1-201ENST00000623002 331 ntBASIC4.91□□□□□ -1.62
SLC44A3Q8N4M1 AC025048.6-202ENST00000627667 438 ntBASIC4.91□□□□□ -1.62
SLC44A3Q8N4M1 AC100871.1-201ENST00000507871 1456 ntBASIC4.91□□□□□ -1.62
SLC44A3Q8N4M1 THAP12P5-201ENST00000405864 2275 ntBASIC4.91□□□□□ -1.62
SLC44A3Q8N4M1 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.91□□□□□ -1.62
SLC44A3Q8N4M1 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.91□□□□□ -1.62
SLC44A3Q8N4M1 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SLC44A3Q8N4M1 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SLC44A3Q8N4M1 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SLC44A3Q8N4M1 TLK1P1-201ENST00000456760 2440 ntBASIC4.91□□□□□ -1.62
SLC44A3Q8N4M1 PCAT14-202ENST00000627127 3935 ntBASIC4.91□□□□□ -1.62
SLC44A3Q8N4M1 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
SLC44A3Q8N4M1 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
SLC44A3Q8N4M1 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
SLC44A3Q8N4M1 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
SLC44A3Q8N4M1 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.9□□□□□ -1.62
SLC44A3Q8N4M1 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.9□□□□□ -1.62
SLC44A3Q8N4M1 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
SLC44A3Q8N4M1 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SLC44A3Q8N4M1 CR848007.1-201ENST00000442354 1699 ntBASIC4.9□□□□□ -1.62
SLC44A3Q8N4M1 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.9□□□□□ -1.62
SLC44A3Q8N4M1 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
SLC44A3Q8N4M1 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.9□□□□□ -1.63
SLC44A3Q8N4M1 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
SLC44A3Q8N4M1 RNU4-7P-201ENST00000364758 141 ntBASIC4.9□□□□□ -1.63
SLC44A3Q8N4M1 RNU6-619P-201ENST00000365146 108 ntBASIC4.9□□□□□ -1.63
SLC44A3Q8N4M1 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.9□□□□□ -1.63
SLC44A3Q8N4M1 RNU6-532P-201ENST00000384318 107 ntBASIC4.9□□□□□ -1.63
SLC44A3Q8N4M1 MIR525-201ENST00000384978 85 ntBASIC4.9□□□□□ -1.63
SLC44A3Q8N4M1 RN7SKP267-201ENST00000410381 285 ntBASIC4.9□□□□□ -1.63
SLC44A3Q8N4M1 SLC44A3-AS1-205ENST00000424505 612 ntBASIC4.9□□□□□ -1.63
SLC44A3Q8N4M1 MTND1P2-201ENST00000430604 821 ntBASIC4.9□□□□□ -1.63
SLC44A3Q8N4M1 SEPT7P5-201ENST00000434048 306 ntBASIC4.9□□□□□ -1.63
SLC44A3Q8N4M1 RPS17P8-201ENST00000434525 335 ntBASIC4.9□□□□□ -1.63
SLC44A3Q8N4M1 MTND1P28-201ENST00000435623 950 ntBASIC4.9□□□□□ -1.63
SLC44A3Q8N4M1 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.9□□□□□ -1.63
SLC44A3Q8N4M1 UBE2V1P8-201ENST00000437166 265 ntBASIC4.9□□□□□ -1.63
SLC44A3Q8N4M1 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.9□□□□□ -1.63
SLC44A3Q8N4M1 AC091862.1-201ENST00000438016 1100 ntBASIC4.9□□□□□ -1.63
SLC44A3Q8N4M1 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.9□□□□□ -1.63
SLC44A3Q8N4M1 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.9□□□□□ -1.63
SLC44A3Q8N4M1 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.9□□□□□ -1.63
SLC44A3Q8N4M1 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.9□□□□□ -1.63
SLC44A3Q8N4M1 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.9□□□□□ -1.63
SLC44A3Q8N4M1 AC007016.1-201ENST00000512110 244 ntBASIC4.9□□□□□ -1.63
SLC44A3Q8N4M1 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC4.9□□□□□ -1.63
SLC44A3Q8N4M1 TCP11X3P-202ENST00000514289 1254 ntBASIC4.9□□□□□ -1.63
SLC44A3Q8N4M1 AC025881.1-201ENST00000518851 512 ntBASIC4.9□□□□□ -1.63
SLC44A3Q8N4M1 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.9□□□□□ -1.63
SLC44A3Q8N4M1 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC4.9□□□□□ -1.63
SLC44A3Q8N4M1 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SLC44A3Q8N4M1 EEF1B2P4-201ENST00000551398 348 ntBASIC4.9□□□□□ -1.63
SLC44A3Q8N4M1 AL358913.1-201ENST00000554342 121 ntBASIC4.9□□□□□ -1.63
SLC44A3Q8N4M1 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC4.9□□□□□ -1.63
SLC44A3Q8N4M1 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.9□□□□□ -1.63
SLC44A3Q8N4M1 BNIP3P33-201ENST00000598912 569 ntBASIC4.9□□□□□ -1.63
SLC44A3Q8N4M1 RNF138P2-201ENST00000603490 592 ntBASIC4.9□□□□□ -1.63
SLC44A3Q8N4M1 LARP7P1-201ENST00000605576 316 ntBASIC4.9□□□□□ -1.63
SLC44A3Q8N4M1 AC024560.3-201ENST00000608482 349 ntBASIC4.9□□□□□ -1.63
SLC44A3Q8N4M1 AL589743.7-201ENST00000612637 233 ntBASIC4.9□□□□□ -1.63
SLC44A3Q8N4M1 AC090517.2-201ENST00000614966 680 ntBASIC4.9□□□□□ -1.63
SLC44A3Q8N4M1 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.9□□□□□ -1.63
SLC44A3Q8N4M1 AC006840.1-201ENST00000623069 542 ntBASIC4.9□□□□□ -1.63
SLC44A3Q8N4M1 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.9□□□□□ -1.63
SLC44A3Q8N4M1 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.9□□□□□ -1.63
SLC44A3Q8N4M1 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.9□□□□□ -1.63
SLC44A3Q8N4M1 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SLC44A3Q8N4M1 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SLC44A3Q8N4M1 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SLC44A3Q8N4M1 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SLC44A3Q8N4M1 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
SLC44A3Q8N4M1 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.9□□□□□ -1.63
SLC44A3Q8N4M1 SMG1P6-201ENST00000532337 2930 ntBASIC4.9□□□□□ -1.63
SLC44A3Q8N4M1 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.89□□□□□ -1.63
SLC44A3Q8N4M1 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.89□□□□□ -1.63
SLC44A3Q8N4M1 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SLC44A3Q8N4M1 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC4.89□□□□□ -1.63
SLC44A3Q8N4M1 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.89□□□□□ -1.63
SLC44A3Q8N4M1 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
SLC44A3Q8N4M1 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SLC44A3Q8N4M1 AC073136.1-201ENST00000449426 2884 ntBASIC4.89□□□□□ -1.63
SLC44A3Q8N4M1 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.89□□□□□ -1.63
SLC44A3Q8N4M1 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
SLC44A3Q8N4M1 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SLC44A3Q8N4M1 RNU5D-1-201ENST00000363299 116 ntBASIC4.89□□□□□ -1.63
SLC44A3Q8N4M1 RNU6-660P-201ENST00000364566 109 ntBASIC4.89□□□□□ -1.63
SLC44A3Q8N4M1 Y_RNA.303-201ENST00000364998 94 ntBASIC4.89□□□□□ -1.63
SLC44A3Q8N4M1 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SLC44A3Q8N4M1 Y_RNA.390-201ENST00000383932 102 ntBASIC4.89□□□□□ -1.63
SLC44A3Q8N4M1 U3.32-201ENST00000408116 212 ntBASIC4.89□□□□□ -1.63
SLC44A3Q8N4M1 SNORA11C-201ENST00000408532 129 ntBASIC4.89□□□□□ -1.63
SLC44A3Q8N4M1 AL591848.1-201ENST00000413092 322 ntBASIC4.89□□□□□ -1.63
SLC44A3Q8N4M1 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.89□□□□□ -1.63
SLC44A3Q8N4M1 COX5BP7-201ENST00000414780 274 ntBASIC4.89□□□□□ -1.63
SLC44A3Q8N4M1 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.89□□□□□ -1.63
SLC44A3Q8N4M1 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.89□□□□□ -1.63
SLC44A3Q8N4M1 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC4.89□□□□□ -1.63
SLC44A3Q8N4M1 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.89□□□□□ -1.63
SLC44A3Q8N4M1 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC4.89□□□□□ -1.63
SLC44A3Q8N4M1 Z93242.1-201ENST00000427102 353 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 404 ms