Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 AC073869.10-201ENST00000642016 354 ntBASIC4.78□□□□□ -1.64
KRT78Q8N1N4 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
KRT78Q8N1N4 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRT78Q8N1N4 AC008758.3-201ENST00000507003 1829 ntBASIC4.78□□□□□ -1.64
KRT78Q8N1N4 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.78□□□□□ -1.64
KRT78Q8N1N4 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRT78Q8N1N4 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
KRT78Q8N1N4 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
KRT78Q8N1N4 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRT78Q8N1N4 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
KRT78Q8N1N4 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
KRT78Q8N1N4 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.77□□□□□ -1.65
KRT78Q8N1N4 C4BPAP1-201ENST00000415474 1893 ntBASIC4.77□□□□□ -1.65
KRT78Q8N1N4 AC022893.2-201ENST00000564832 3296 ntBASIC4.77□□□□□ -1.65
KRT78Q8N1N4 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRT78Q8N1N4 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
KRT78Q8N1N4 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRT78Q8N1N4 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRT78Q8N1N4 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
KRT78Q8N1N4 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRT78Q8N1N4 Y_RNA.436-201ENST00000384097 102 ntBASIC4.77□□□□□ -1.65
KRT78Q8N1N4 RNU6-356P-201ENST00000384140 107 ntBASIC4.77□□□□□ -1.65
KRT78Q8N1N4 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
KRT78Q8N1N4 AC013442.1-201ENST00000397347 228 ntBASIC4.77□□□□□ -1.65
KRT78Q8N1N4 RPL31P1-201ENST00000398116 372 ntBASIC4.77□□□□□ -1.65
KRT78Q8N1N4 DHFRP6-201ENST00000401776 268 ntBASIC4.77□□□□□ -1.65
KRT78Q8N1N4 AL078599.1-201ENST00000402075 293 ntBASIC4.77□□□□□ -1.65
KRT78Q8N1N4 VN1R8P-201ENST00000407739 893 ntBASIC4.77□□□□□ -1.65
KRT78Q8N1N4 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.77□□□□□ -1.65
KRT78Q8N1N4 RN7SKP213-201ENST00000410746 298 ntBASIC4.77□□□□□ -1.65
KRT78Q8N1N4 GJA6P-201ENST00000415117 1042 ntBASIC4.77□□□□□ -1.65
KRT78Q8N1N4 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC4.77□□□□□ -1.65
KRT78Q8N1N4 AC093162.1-201ENST00000419682 124 ntBASIC4.77□□□□□ -1.65
KRT78Q8N1N4 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.77□□□□□ -1.65
KRT78Q8N1N4 AL589823.1-201ENST00000429577 183 ntBASIC4.77□□□□□ -1.65
KRT78Q8N1N4 AC098826.1-201ENST00000433943 471 ntBASIC4.77□□□□□ -1.65
KRT78Q8N1N4 CKS1BP5-201ENST00000434172 273 ntBASIC4.77□□□□□ -1.65
KRT78Q8N1N4 AC127537.2-201ENST00000439258 465 ntBASIC4.77□□□□□ -1.65
KRT78Q8N1N4 RPL34P20-201ENST00000442771 351 ntBASIC4.77□□□□□ -1.65
KRT78Q8N1N4 RPL36AP15-201ENST00000444514 266 ntBASIC4.77□□□□□ -1.65
KRT78Q8N1N4 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.77□□□□□ -1.65
KRT78Q8N1N4 RPL29P29-201ENST00000448725 423 ntBASIC4.77□□□□□ -1.65
KRT78Q8N1N4 AC073850.1-201ENST00000449243 255 ntBASIC4.77□□□□□ -1.65
KRT78Q8N1N4 ZNF114P1-201ENST00000453500 292 ntBASIC4.77□□□□□ -1.65
KRT78Q8N1N4 USP9YP34-201ENST00000453983 808 ntBASIC4.77□□□□□ -1.65
KRT78Q8N1N4 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.77□□□□□ -1.65
KRT78Q8N1N4 AC018638.3-201ENST00000461273 132 ntBASIC4.77□□□□□ -1.65
KRT78Q8N1N4 RN7SL517P-201ENST00000462240 305 ntBASIC4.77□□□□□ -1.65
KRT78Q8N1N4 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.77□□□□□ -1.65
KRT78Q8N1N4 LAMTOR3P2-201ENST00000504479 232 ntBASIC4.77□□□□□ -1.65
KRT78Q8N1N4 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.77□□□□□ -1.65
KRT78Q8N1N4 RN7SKP147-201ENST00000517154 244 ntBASIC4.77□□□□□ -1.65
KRT78Q8N1N4 HMGB1P19-201ENST00000517578 577 ntBASIC4.77□□□□□ -1.65
KRT78Q8N1N4 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.77□□□□□ -1.65
KRT78Q8N1N4 AC106038.2-201ENST00000520706 568 ntBASIC4.77□□□□□ -1.65
KRT78Q8N1N4 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.77□□□□□ -1.65
KRT78Q8N1N4 AL139174.1-201ENST00000531489 886 ntBASIC4.77□□□□□ -1.65
KRT78Q8N1N4 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.77□□□□□ -1.65
KRT78Q8N1N4 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.77□□□□□ -1.65
KRT78Q8N1N4 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
KRT78Q8N1N4 HMGB3P26-201ENST00000560051 582 ntBASIC4.77□□□□□ -1.65
KRT78Q8N1N4 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.77□□□□□ -1.65
KRT78Q8N1N4 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.77□□□□□ -1.65
KRT78Q8N1N4 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.77□□□□□ -1.65
KRT78Q8N1N4 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.77□□□□□ -1.65
KRT78Q8N1N4 WISP1-OT1-201ENST00000602893 642 ntBASIC4.77□□□□□ -1.65
KRT78Q8N1N4 AC073091.2-201ENST00000603205 907 ntBASIC4.77□□□□□ -1.65
KRT78Q8N1N4 AL355812.1-201ENST00000603215 216 ntBASIC4.77□□□□□ -1.65
KRT78Q8N1N4 AC073114.1-201ENST00000612027 490 ntBASIC4.77□□□□□ -1.65
KRT78Q8N1N4 AL627230.1-201ENST00000613077 211 ntBASIC4.77□□□□□ -1.65
KRT78Q8N1N4 AL512624.1-201ENST00000613638 469 ntBASIC4.77□□□□□ -1.65
KRT78Q8N1N4 AL591926.8-201ENST00000616876 211 ntBASIC4.77□□□□□ -1.65
KRT78Q8N1N4 AC073968.1-201ENST00000618594 637 ntBASIC4.77□□□□□ -1.65
KRT78Q8N1N4 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC4.77□□□□□ -1.65
KRT78Q8N1N4 AC092192.1-201ENST00000633154 1018 ntBASIC4.77□□□□□ -1.65
KRT78Q8N1N4 MIR6715B-201ENST00000637172 77 ntBASIC4.77□□□□□ -1.65
KRT78Q8N1N4 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.77□□□□□ -1.65
KRT78Q8N1N4 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRT78Q8N1N4 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRT78Q8N1N4 RARSP1-201ENST00000542842 1418 ntBASIC4.77□□□□□ -1.65
KRT78Q8N1N4 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
KRT78Q8N1N4 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
KRT78Q8N1N4 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
KRT78Q8N1N4 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.77□□□□□ -1.65
KRT78Q8N1N4 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
KRT78Q8N1N4 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
KRT78Q8N1N4 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRT78Q8N1N4 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.77□□□□□ -1.65
KRT78Q8N1N4 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.77□□□□□ -1.65
KRT78Q8N1N4 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.77□□□□□ -1.65
KRT78Q8N1N4 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.77□□□□□ -1.65
KRT78Q8N1N4 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRT78Q8N1N4 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
KRT78Q8N1N4 AL672167.1-205ENST00000641112 3080 ntBASIC4.76□□□□□ -1.65
KRT78Q8N1N4 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
KRT78Q8N1N4 Z73965.1-201ENST00000623412 2297 ntBASIC4.76□□□□□ -1.65
KRT78Q8N1N4 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
KRT78Q8N1N4 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
KRT78Q8N1N4 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
KRT78Q8N1N4 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms