Protein–RNA interactions for Protein: Q8IX90

SKA3, Spindle and kinetochore-associated protein 3, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3Q8IX90 AC087650.1-201ENST00000431445 468 ntBASIC3.47□□□□□ -1.85
SKA3Q8IX90 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.47□□□□□ -1.85
SKA3Q8IX90 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.47□□□□□ -1.85
SKA3Q8IX90 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.47□□□□□ -1.85
SKA3Q8IX90 AC083863.1-201ENST00000438811 231 ntBASIC3.47□□□□□ -1.85
SKA3Q8IX90 HMGB1P37-201ENST00000439613 609 ntBASIC3.47□□□□□ -1.85
SKA3Q8IX90 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.47□□□□□ -1.85
SKA3Q8IX90 HMGN1P5-201ENST00000448591 263 ntBASIC3.47□□□□□ -1.85
SKA3Q8IX90 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.47□□□□□ -1.85
SKA3Q8IX90 MTCO3P16-201ENST00000454456 754 ntBASIC3.47□□□□□ -1.85
SKA3Q8IX90 AC096992.1-201ENST00000459808 709 ntBASIC3.47□□□□□ -1.85
SKA3Q8IX90 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.47□□□□□ -1.85
SKA3Q8IX90 AC018635.1-201ENST00000468292 1030 ntBASIC3.47□□□□□ -1.85
SKA3Q8IX90 RPS4XP6-201ENST00000477670 797 ntBASIC3.47□□□□□ -1.85
SKA3Q8IX90 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.47□□□□□ -1.85
SKA3Q8IX90 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.47□□□□□ -1.85
SKA3Q8IX90 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.47□□□□□ -1.85
SKA3Q8IX90 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.47□□□□□ -1.85
SKA3Q8IX90 NDUFB4P9-201ENST00000511646 388 ntBASIC3.47□□□□□ -1.85
SKA3Q8IX90 AC108064.1-201ENST00000513791 460 ntBASIC3.47□□□□□ -1.85
SKA3Q8IX90 AC008494.2-201ENST00000514544 370 ntBASIC3.47□□□□□ -1.85
SKA3Q8IX90 AC112206.4-201ENST00000515142 405 ntBASIC3.47□□□□□ -1.85
SKA3Q8IX90 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.47□□□□□ -1.85
SKA3Q8IX90 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC3.47□□□□□ -1.85
SKA3Q8IX90 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.47□□□□□ -1.85
SKA3Q8IX90 AL161713.1-201ENST00000555538 145 ntBASIC3.47□□□□□ -1.85
SKA3Q8IX90 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.47□□□□□ -1.85
SKA3Q8IX90 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.47□□□□□ -1.85
SKA3Q8IX90 MIR4789-201ENST00000577469 82 ntBASIC3.47□□□□□ -1.85
SKA3Q8IX90 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
SKA3Q8IX90 AL109620.1-201ENST00000618738 1197 ntBASIC3.47□□□□□ -1.85
SKA3Q8IX90 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.47□□□□□ -1.85
SKA3Q8IX90 AC106858.1-201ENST00000637497 429 ntBASIC3.47□□□□□ -1.85
SKA3Q8IX90 AC017104.5-201ENST00000637647 639 ntBASIC3.47□□□□□ -1.85
SKA3Q8IX90 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.47□□□□□ -1.85
SKA3Q8IX90 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
SKA3Q8IX90 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.47□□□□□ -1.85
SKA3Q8IX90 AC022031.1-201ENST00000585985 2593 ntBASIC3.47□□□□□ -1.85
SKA3Q8IX90 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.47□□□□□ -1.85
SKA3Q8IX90 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.85
SKA3Q8IX90 ZNF849P-201ENST00000594711 1566 ntBASIC3.46□□□□□ -1.85
SKA3Q8IX90 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.46□□□□□ -1.85
SKA3Q8IX90 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SKA3Q8IX90 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.46□□□□□ -1.86
SKA3Q8IX90 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SKA3Q8IX90 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SKA3Q8IX90 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.46□□□□□ -1.86
SKA3Q8IX90 U3.15-201ENST00000365398 212 ntBASIC3.46□□□□□ -1.86
SKA3Q8IX90 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
SKA3Q8IX90 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.46□□□□□ -1.86
SKA3Q8IX90 RNU2-65P-201ENST00000410162 185 ntBASIC3.46□□□□□ -1.86
SKA3Q8IX90 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.46□□□□□ -1.86
SKA3Q8IX90 MTND2P15-201ENST00000418575 892 ntBASIC3.46□□□□□ -1.86
SKA3Q8IX90 AC241520.1-201ENST00000422654 1099 ntBASIC3.46□□□□□ -1.86
SKA3Q8IX90 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.46□□□□□ -1.86
SKA3Q8IX90 FABP5P3-201ENST00000437960 408 ntBASIC3.46□□□□□ -1.86
SKA3Q8IX90 HSFY6P-201ENST00000445573 403 ntBASIC3.46□□□□□ -1.86
SKA3Q8IX90 HMGB3P8-201ENST00000449709 577 ntBASIC3.46□□□□□ -1.86
SKA3Q8IX90 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.46□□□□□ -1.86
SKA3Q8IX90 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.46□□□□□ -1.86
SKA3Q8IX90 NUTF2P7-201ENST00000453086 375 ntBASIC3.46□□□□□ -1.86
SKA3Q8IX90 MRPL35P4-201ENST00000453682 566 ntBASIC3.46□□□□□ -1.86
SKA3Q8IX90 AC103987.1-201ENST00000473394 348 ntBASIC3.46□□□□□ -1.86
SKA3Q8IX90 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.46□□□□□ -1.86
SKA3Q8IX90 RPS4XP15-201ENST00000489210 795 ntBASIC3.46□□□□□ -1.86
SKA3Q8IX90 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.46□□□□□ -1.86
SKA3Q8IX90 FTH1P21-201ENST00000512179 511 ntBASIC3.46□□□□□ -1.86
SKA3Q8IX90 MIR2116-201ENST00000517221 80 ntBASIC3.46□□□□□ -1.86
SKA3Q8IX90 IGKV2-23-201ENST00000518729 323 ntBASIC3.46□□□□□ -1.86
SKA3Q8IX90 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC3.46□□□□□ -1.86
SKA3Q8IX90 HMGB1P1-201ENST00000522557 636 ntBASIC3.46□□□□□ -1.86
SKA3Q8IX90 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.46□□□□□ -1.86
SKA3Q8IX90 YPEL5P3-201ENST00000547227 352 ntBASIC3.46□□□□□ -1.86
SKA3Q8IX90 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.46□□□□□ -1.86
SKA3Q8IX90 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.46□□□□□ -1.86
SKA3Q8IX90 AC023824.3-201ENST00000569003 562 ntBASIC3.46□□□□□ -1.86
SKA3Q8IX90 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.46□□□□□ -1.86
SKA3Q8IX90 AC103710.3-201ENST00000608157 948 ntBASIC3.46□□□□□ -1.86
SKA3Q8IX90 AC092653.1-201ENST00000608509 531 ntBASIC3.46□□□□□ -1.86
SKA3Q8IX90 AC243756.2-201ENST00000618406 463 ntBASIC3.46□□□□□ -1.86
SKA3Q8IX90 AC018926.3-201ENST00000618841 406 ntBASIC3.46□□□□□ -1.86
SKA3Q8IX90 AL139089.1-201ENST00000620372 975 ntBASIC3.46□□□□□ -1.86
SKA3Q8IX90 AC093875.1-201ENST00000623688 504 ntBASIC3.46□□□□□ -1.86
SKA3Q8IX90 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SKA3Q8IX90 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SKA3Q8IX90 AP002001.2-201ENST00000529025 1469 ntBASIC3.46□□□□□ -1.86
SKA3Q8IX90 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.46□□□□□ -1.86
SKA3Q8IX90 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
SKA3Q8IX90 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.46□□□□□ -1.86
SKA3Q8IX90 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.46□□□□□ -1.86
SKA3Q8IX90 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.45□□□□□ -1.86
SKA3Q8IX90 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SKA3Q8IX90 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.45□□□□□ -1.86
SKA3Q8IX90 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.45□□□□□ -1.86
SKA3Q8IX90 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.45□□□□□ -1.86
SKA3Q8IX90 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
SKA3Q8IX90 SNORD65C-201ENST00000390962 71 ntBASIC3.45□□□□□ -1.86
SKA3Q8IX90 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.45□□□□□ -1.86
SKA3Q8IX90 MTCO3P31-201ENST00000405526 789 ntBASIC3.45□□□□□ -1.86
SKA3Q8IX90 AC069282.1-201ENST00000411911 526 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms