Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
LRRC28Q86X40 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.1□□□□□ -1.91
LRRC28Q86X40 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.1□□□□□ -1.91
LRRC28Q86X40 HMGB3P23-201ENST00000414981 585 ntBASIC3.1□□□□□ -1.91
LRRC28Q86X40 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.1□□□□□ -1.91
LRRC28Q86X40 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
LRRC28Q86X40 SDCBPP2-201ENST00000424643 885 ntBASIC3.1□□□□□ -1.91
LRRC28Q86X40 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC3.1□□□□□ -1.91
LRRC28Q86X40 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.1□□□□□ -1.91
LRRC28Q86X40 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.1□□□□□ -1.91
LRRC28Q86X40 AL050321.1-201ENST00000432363 400 ntBASIC3.1□□□□□ -1.91
LRRC28Q86X40 ISCA1P2-201ENST00000438679 421 ntBASIC3.1□□□□□ -1.91
LRRC28Q86X40 VN1R34P-201ENST00000447387 883 ntBASIC3.1□□□□□ -1.91
LRRC28Q86X40 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC3.1□□□□□ -1.91
LRRC28Q86X40 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.1□□□□□ -1.91
LRRC28Q86X40 RN7SL594P-201ENST00000470590 287 ntBASIC3.1□□□□□ -1.91
LRRC28Q86X40 SETP14-201ENST00000497538 873 ntBASIC3.1□□□□□ -1.91
LRRC28Q86X40 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.1□□□□□ -1.91
LRRC28Q86X40 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.1□□□□□ -1.91
LRRC28Q86X40 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC3.1□□□□□ -1.91
LRRC28Q86X40 MIR2276-201ENST00000516886 89 ntBASIC3.1□□□□□ -1.91
LRRC28Q86X40 AC007991.1-201ENST00000522680 631 ntBASIC3.1□□□□□ -1.91
LRRC28Q86X40 OR5D17P-201ENST00000531492 978 ntBASIC3.1□□□□□ -1.91
LRRC28Q86X40 TRAV37-201ENST00000553906 342 ntBASIC3.1□□□□□ -1.91
LRRC28Q86X40 OR4T1P-201ENST00000554933 911 ntBASIC3.1□□□□□ -1.91
LRRC28Q86X40 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC3.1□□□□□ -1.91
LRRC28Q86X40 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.1□□□□□ -1.91
LRRC28Q86X40 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.1□□□□□ -1.91
LRRC28Q86X40 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.1□□□□□ -1.91
LRRC28Q86X40 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.1□□□□□ -1.91
LRRC28Q86X40 AC011468.4-201ENST00000603942 409 ntBASIC3.1□□□□□ -1.91
LRRC28Q86X40 AC006077.1-201ENST00000604746 343 ntBASIC3.1□□□□□ -1.91
LRRC28Q86X40 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
LRRC28Q86X40 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.1□□□□□ -1.91
LRRC28Q86X40 RFC1-217ENST00000639695 867 ntTSL 5 BASIC3.1□□□□□ -1.91
LRRC28Q86X40 OR8B1P-202ENST00000641132 1178 ntBASIC3.1□□□□□ -1.91
LRRC28Q86X40 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
LRRC28Q86X40 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.1□□□□□ -1.91
LRRC28Q86X40 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
LRRC28Q86X40 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
LRRC28Q86X40 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
LRRC28Q86X40 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
LRRC28Q86X40 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
LRRC28Q86X40 SRP72P2-201ENST00000344851 1979 ntBASIC3.09□□□□□ -1.91
LRRC28Q86X40 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
LRRC28Q86X40 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
LRRC28Q86X40 U3.11-201ENST00000364476 212 ntBASIC3.09□□□□□ -1.91
LRRC28Q86X40 RNA5SP51-201ENST00000364750 119 ntBASIC3.09□□□□□ -1.91
LRRC28Q86X40 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.09□□□□□ -1.91
LRRC28Q86X40 MIR449B-201ENST00000384995 97 ntBASIC3.09□□□□□ -1.91
LRRC28Q86X40 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
LRRC28Q86X40 RPL7P60-201ENST00000397636 735 ntBASIC3.09□□□□□ -1.91
LRRC28Q86X40 HSPE1P26-201ENST00000405341 275 ntBASIC3.09□□□□□ -1.91
LRRC28Q86X40 AL583834.1-201ENST00000406943 343 ntBASIC3.09□□□□□ -1.91
LRRC28Q86X40 SYF2P2-201ENST00000417620 583 ntBASIC3.09□□□□□ -1.91
LRRC28Q86X40 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.09□□□□□ -1.91
LRRC28Q86X40 FTH1P1-201ENST00000437933 532 ntBASIC3.09□□□□□ -1.91
LRRC28Q86X40 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.09□□□□□ -1.91
LRRC28Q86X40 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.09□□□□□ -1.91
LRRC28Q86X40 SNORD105B-201ENST00000458770 79 ntBASIC3.09□□□□□ -1.91
LRRC28Q86X40 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.09□□□□□ -1.91
LRRC28Q86X40 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC3.09□□□□□ -1.91
LRRC28Q86X40 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.09□□□□□ -1.91
LRRC28Q86X40 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.09□□□□□ -1.91
LRRC28Q86X40 RN7SKP18-201ENST00000516005 275 ntBASIC3.09□□□□□ -1.91
LRRC28Q86X40 AC107934.2-201ENST00000518653 310 ntBASIC3.09□□□□□ -1.91
LRRC28Q86X40 AC026403.1-201ENST00000518938 295 ntBASIC3.09□□□□□ -1.91
LRRC28Q86X40 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC3.09□□□□□ -1.91
LRRC28Q86X40 IGHV3-76-201ENST00000522465 295 ntBASIC3.09□□□□□ -1.91
LRRC28Q86X40 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.09□□□□□ -1.91
LRRC28Q86X40 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.09□□□□□ -1.91
LRRC28Q86X40 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.09□□□□□ -1.91
LRRC28Q86X40 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.09□□□□□ -1.91
LRRC28Q86X40 PLCE1P1-201ENST00000622094 305 ntBASIC3.09□□□□□ -1.91
LRRC28Q86X40 AL034408.1-202ENST00000636088 415 ntBASIC3.09□□□□□ -1.91
LRRC28Q86X40 AL353746.1-201ENST00000566293 6881 ntBASIC3.09□□□□□ -1.91
LRRC28Q86X40 MTND5P27-201ENST00000428871 1720 ntBASIC3.09□□□□□ -1.91
LRRC28Q86X40 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
LRRC28Q86X40 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.09□□□□□ -1.92
LRRC28Q86X40 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
LRRC28Q86X40 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.08□□□□□ -1.92
LRRC28Q86X40 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.08□□□□□ -1.92
LRRC28Q86X40 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.08□□□□□ -1.92
LRRC28Q86X40 SNORD56.3-201ENST00000363507 71 ntBASIC3.08□□□□□ -1.92
LRRC28Q86X40 RNU6-1331P-201ENST00000363658 106 ntBASIC3.08□□□□□ -1.92
LRRC28Q86X40 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
LRRC28Q86X40 SNORA48.8-201ENST00000391324 134 ntBASIC3.08□□□□□ -1.92
LRRC28Q86X40 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.08□□□□□ -1.92
LRRC28Q86X40 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.08□□□□□ -1.92
LRRC28Q86X40 PRELID3BP11-201ENST00000414230 479 ntBASIC3.08□□□□□ -1.92
LRRC28Q86X40 AC245054.1-201ENST00000420944 258 ntBASIC3.08□□□□□ -1.92
LRRC28Q86X40 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.08□□□□□ -1.92
LRRC28Q86X40 ELOCP6-201ENST00000429066 328 ntBASIC3.08□□□□□ -1.92
LRRC28Q86X40 AL645931.1-201ENST00000439737 410 ntBASIC3.08□□□□□ -1.92
LRRC28Q86X40 AL157884.3-201ENST00000448273 1184 ntBASIC3.08□□□□□ -1.92
LRRC28Q86X40 PTGES3P5-201ENST00000455109 434 ntBASIC3.08□□□□□ -1.92
LRRC28Q86X40 ELOCP12-201ENST00000458706 328 ntBASIC3.08□□□□□ -1.92
LRRC28Q86X40 U3.44-201ENST00000458938 192 ntBASIC3.08□□□□□ -1.92
LRRC28Q86X40 AC106707.2-201ENST00000484182 374 ntBASIC3.08□□□□□ -1.92
LRRC28Q86X40 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms