Protein–RNA interactions for Protein: Q6NT89

TRNP1, TMF-regulated nuclear protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRNP1Q6NT89 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
TRNP1Q6NT89 RLIMP1-201ENST00000339626 1680 ntBASIC4.22□□□□□ -1.73
TRNP1Q6NT89 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
TRNP1Q6NT89 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TRNP1Q6NT89 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
TRNP1Q6NT89 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.21□□□□□ -1.74
TRNP1Q6NT89 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
TRNP1Q6NT89 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
TRNP1Q6NT89 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
TRNP1Q6NT89 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
TRNP1Q6NT89 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
TRNP1Q6NT89 FAM133CP-201ENST00000332869 704 ntBASIC4.21□□□□□ -1.74
TRNP1Q6NT89 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
TRNP1Q6NT89 MIR372-201ENST00000362225 67 ntBASIC4.21□□□□□ -1.74
TRNP1Q6NT89 Y_RNA.192-201ENST00000363977 102 ntBASIC4.21□□□□□ -1.74
TRNP1Q6NT89 RNA5SP399-201ENST00000364003 117 ntBASIC4.21□□□□□ -1.74
TRNP1Q6NT89 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.21□□□□□ -1.74
TRNP1Q6NT89 RNU1-13P-201ENST00000384499 162 ntBASIC4.21□□□□□ -1.74
TRNP1Q6NT89 ENSAP1-201ENST00000392855 326 ntBASIC4.21□□□□□ -1.74
TRNP1Q6NT89 AL022722.2-201ENST00000402519 180 ntBASIC4.21□□□□□ -1.74
TRNP1Q6NT89 MTND4P22-201ENST00000413116 1169 ntBASIC4.21□□□□□ -1.74
TRNP1Q6NT89 PTP4A1P5-201ENST00000420305 455 ntBASIC4.21□□□□□ -1.74
TRNP1Q6NT89 COX6CP17-201ENST00000421389 185 ntBASIC4.21□□□□□ -1.74
TRNP1Q6NT89 AC011233.1-201ENST00000422812 283 ntBASIC4.21□□□□□ -1.74
TRNP1Q6NT89 AC011742.1-201ENST00000431448 434 ntBASIC4.21□□□□□ -1.74
TRNP1Q6NT89 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.21□□□□□ -1.74
TRNP1Q6NT89 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
TRNP1Q6NT89 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC4.21□□□□□ -1.74
TRNP1Q6NT89 GTF2IP7-202ENST00000436677 309 ntBASIC4.21□□□□□ -1.74
TRNP1Q6NT89 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.21□□□□□ -1.74
TRNP1Q6NT89 AL008629.1-201ENST00000438615 184 ntBASIC4.21□□□□□ -1.74
TRNP1Q6NT89 AC093155.1-201ENST00000440164 826 ntBASIC4.21□□□□□ -1.74
TRNP1Q6NT89 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
TRNP1Q6NT89 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC4.21□□□□□ -1.74
TRNP1Q6NT89 ATG12P2-201ENST00000456830 416 ntBASIC4.21□□□□□ -1.74
TRNP1Q6NT89 RPL38P1-201ENST00000460914 211 ntBASIC4.21□□□□□ -1.74
TRNP1Q6NT89 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
TRNP1Q6NT89 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.21□□□□□ -1.74
TRNP1Q6NT89 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC4.21□□□□□ -1.74
TRNP1Q6NT89 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.21□□□□□ -1.74
TRNP1Q6NT89 AC011352.3-201ENST00000505162 593 ntBASIC4.21□□□□□ -1.74
TRNP1Q6NT89 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.21□□□□□ -1.74
TRNP1Q6NT89 OR5H4P-201ENST00000510851 923 ntBASIC4.21□□□□□ -1.74
TRNP1Q6NT89 AP000926.4-201ENST00000527351 454 ntBASIC4.21□□□□□ -1.74
TRNP1Q6NT89 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
TRNP1Q6NT89 MTND2P26-201ENST00000528255 1029 ntBASIC4.21□□□□□ -1.74
TRNP1Q6NT89 PDCL2P2-201ENST00000533651 189 ntBASIC4.21□□□□□ -1.74
TRNP1Q6NT89 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC4.21□□□□□ -1.74
TRNP1Q6NT89 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.21□□□□□ -1.74
TRNP1Q6NT89 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.21□□□□□ -1.74
TRNP1Q6NT89 DYNLL1P4-201ENST00000549314 266 ntBASIC4.21□□□□□ -1.74
TRNP1Q6NT89 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.21□□□□□ -1.74
TRNP1Q6NT89 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC4.21□□□□□ -1.74
TRNP1Q6NT89 AC025627.2-201ENST00000576220 160 ntBASIC4.21□□□□□ -1.74
TRNP1Q6NT89 BPTFP1-201ENST00000579209 492 ntBASIC4.21□□□□□ -1.74
TRNP1Q6NT89 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.21□□□□□ -1.74
TRNP1Q6NT89 AC104662.1-201ENST00000604448 511 ntBASIC4.21□□□□□ -1.74
TRNP1Q6NT89 AL451044.1-201ENST00000604867 238 ntBASIC4.21□□□□□ -1.74
TRNP1Q6NT89 AC018926.3-201ENST00000618841 406 ntBASIC4.21□□□□□ -1.74
TRNP1Q6NT89 AC116563.2-201ENST00000624751 535 ntBASIC4.21□□□□□ -1.74
TRNP1Q6NT89 AC025263.3-201ENST00000622965 1396 ntBASIC4.21□□□□□ -1.74
TRNP1Q6NT89 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
TRNP1Q6NT89 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.21□□□□□ -1.74
TRNP1Q6NT89 AC068254.2-201ENST00000623938 3577 ntBASIC4.21□□□□□ -1.74
TRNP1Q6NT89 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
TRNP1Q6NT89 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
TRNP1Q6NT89 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.21□□□□□ -1.74
TRNP1Q6NT89 SGO1P1-201ENST00000603525 1447 ntBASIC4.21□□□□□ -1.74
TRNP1Q6NT89 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.21□□□□□ -1.74
TRNP1Q6NT89 SCN1A-220ENST00000641603 12506 ntBASIC4.2□□□□□ -1.74
TRNP1Q6NT89 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.2□□□□□ -1.74
TRNP1Q6NT89 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
TRNP1Q6NT89 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
TRNP1Q6NT89 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
TRNP1Q6NT89 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
TRNP1Q6NT89 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
TRNP1Q6NT89 SNORD113-6-201ENST00000363345 75 ntBASIC4.2□□□□□ -1.74
TRNP1Q6NT89 SNORD74.4-201ENST00000364129 80 ntBASIC4.2□□□□□ -1.74
TRNP1Q6NT89 SNORA70C-201ENST00000384538 135 ntBASIC4.2□□□□□ -1.74
TRNP1Q6NT89 MIR16-1-201ENST00000385271 89 ntBASIC4.2□□□□□ -1.74
TRNP1Q6NT89 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
TRNP1Q6NT89 RNU2-6P-201ENST00000411404 190 ntBASIC4.2□□□□□ -1.74
TRNP1Q6NT89 AL160275.2-201ENST00000412010 394 ntBASIC4.2□□□□□ -1.74
TRNP1Q6NT89 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.2□□□□□ -1.74
TRNP1Q6NT89 AC234782.4-201ENST00000417646 1048 ntBASIC4.2□□□□□ -1.74
TRNP1Q6NT89 PAICSP7-201ENST00000419829 962 ntBASIC4.2□□□□□ -1.74
TRNP1Q6NT89 MTND2P18-201ENST00000419962 1030 ntBASIC4.2□□□□□ -1.74
TRNP1Q6NT89 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC4.2□□□□□ -1.74
TRNP1Q6NT89 OR5BE1P-201ENST00000425977 939 ntBASIC4.2□□□□□ -1.74
TRNP1Q6NT89 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.2□□□□□ -1.74
TRNP1Q6NT89 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.2□□□□□ -1.74
TRNP1Q6NT89 RPL7P4-203ENST00000430239 730 ntBASIC4.2□□□□□ -1.74
TRNP1Q6NT89 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.2□□□□□ -1.74
TRNP1Q6NT89 SETP8-201ENST00000435341 628 ntBASIC4.2□□□□□ -1.74
TRNP1Q6NT89 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.2□□□□□ -1.74
TRNP1Q6NT89 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
TRNP1Q6NT89 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.2□□□□□ -1.74
TRNP1Q6NT89 HMGB1P48-201ENST00000446155 598 ntBASIC4.2□□□□□ -1.74
TRNP1Q6NT89 AC104978.1-201ENST00000449387 391 ntBASIC4.2□□□□□ -1.74
TRNP1Q6NT89 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms