Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 VN1R8P-201ENST00000407739 893 ntBASIC4.53□□□□□ -1.68
SNX30Q5VWJ9 RNA5SP39-201ENST00000411245 120 ntBASIC4.53□□□□□ -1.68
SNX30Q5VWJ9 RPS20P14-201ENST00000412545 360 ntBASIC4.53□□□□□ -1.68
SNX30Q5VWJ9 RPL31P2-201ENST00000413849 377 ntBASIC4.53□□□□□ -1.68
SNX30Q5VWJ9 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.53□□□□□ -1.68
SNX30Q5VWJ9 NANOGP5-201ENST00000424456 877 ntBASIC4.53□□□□□ -1.68
SNX30Q5VWJ9 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC4.53□□□□□ -1.68
SNX30Q5VWJ9 GSTA7P-201ENST00000438425 448 ntBASIC4.53□□□□□ -1.68
SNX30Q5VWJ9 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.53□□□□□ -1.68
SNX30Q5VWJ9 AL606517.1-201ENST00000446914 387 ntBASIC4.53□□□□□ -1.68
SNX30Q5VWJ9 AC079776.3-201ENST00000450665 370 ntBASIC4.53□□□□□ -1.68
SNX30Q5VWJ9 ZNF886P-201ENST00000450781 723 ntBASIC4.53□□□□□ -1.68
SNX30Q5VWJ9 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.53□□□□□ -1.68
SNX30Q5VWJ9 NUTF2P7-201ENST00000453086 375 ntBASIC4.53□□□□□ -1.68
SNX30Q5VWJ9 RPL37P6-202ENST00000464216 403 ntBASIC4.53□□□□□ -1.68
SNX30Q5VWJ9 AC068587.1-201ENST00000483613 781 ntBASIC4.53□□□□□ -1.68
SNX30Q5VWJ9 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.53□□□□□ -1.68
SNX30Q5VWJ9 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC4.53□□□□□ -1.68
SNX30Q5VWJ9 PARP4P3-201ENST00000510265 317 ntBASIC4.53□□□□□ -1.68
SNX30Q5VWJ9 AC093755.1-201ENST00000512950 1023 ntBASIC4.53□□□□□ -1.68
SNX30Q5VWJ9 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.53□□□□□ -1.68
SNX30Q5VWJ9 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.53□□□□□ -1.68
SNX30Q5VWJ9 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC4.53□□□□□ -1.68
SNX30Q5VWJ9 AP001189.2-201ENST00000527320 189 ntBASIC4.53□□□□□ -1.68
SNX30Q5VWJ9 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.53□□□□□ -1.68
SNX30Q5VWJ9 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.53□□□□□ -1.68
SNX30Q5VWJ9 AL132857.1-201ENST00000555180 708 ntBASIC4.53□□□□□ -1.68
SNX30Q5VWJ9 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.53□□□□□ -1.68
SNX30Q5VWJ9 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC4.53□□□□□ -1.68
SNX30Q5VWJ9 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC4.53□□□□□ -1.68
SNX30Q5VWJ9 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC4.53□□□□□ -1.68
SNX30Q5VWJ9 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.53□□□□□ -1.68
SNX30Q5VWJ9 AL390838.2-201ENST00000602394 274 ntBASIC4.53□□□□□ -1.68
SNX30Q5VWJ9 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.53□□□□□ -1.68
SNX30Q5VWJ9 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.53□□□□□ -1.68
SNX30Q5VWJ9 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.53□□□□□ -1.68
SNX30Q5VWJ9 FP325313.1-201ENST00000638228 703 ntBASIC4.53□□□□□ -1.68
SNX30Q5VWJ9 AC009452.1-201ENST00000640823 606 ntBASIC4.53□□□□□ -1.68
SNX30Q5VWJ9 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SNX30Q5VWJ9 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
SNX30Q5VWJ9 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SNX30Q5VWJ9 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
SNX30Q5VWJ9 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SNX30Q5VWJ9 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.69
SNX30Q5VWJ9 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.52□□□□□ -1.69
SNX30Q5VWJ9 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SNX30Q5VWJ9 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.52□□□□□ -1.69
SNX30Q5VWJ9 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.52□□□□□ -1.69
SNX30Q5VWJ9 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
SNX30Q5VWJ9 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
SNX30Q5VWJ9 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
SNX30Q5VWJ9 RNA5SP175-201ENST00000364275 119 ntBASIC4.52□□□□□ -1.69
SNX30Q5VWJ9 RNU6-356P-201ENST00000384140 107 ntBASIC4.52□□□□□ -1.69
SNX30Q5VWJ9 SNORA70C-201ENST00000384538 135 ntBASIC4.52□□□□□ -1.69
SNX30Q5VWJ9 MIR649-201ENST00000384843 97 ntBASIC4.52□□□□□ -1.69
SNX30Q5VWJ9 MIR153-1-201ENST00000384914 90 ntBASIC4.52□□□□□ -1.69
SNX30Q5VWJ9 ENSAP1-201ENST00000392855 326 ntBASIC4.52□□□□□ -1.69
SNX30Q5VWJ9 AL161909.1-201ENST00000397390 712 ntBASIC4.52□□□□□ -1.69
SNX30Q5VWJ9 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SNX30Q5VWJ9 MIR1250-201ENST00000408098 113 ntBASIC4.52□□□□□ -1.69
SNX30Q5VWJ9 AC073264.1-201ENST00000411508 416 ntBASIC4.52□□□□□ -1.69
SNX30Q5VWJ9 NRBF2P2-201ENST00000413087 861 ntBASIC4.52□□□□□ -1.69
SNX30Q5VWJ9 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.52□□□□□ -1.69
SNX30Q5VWJ9 RPS3AP37-201ENST00000419176 745 ntBASIC4.52□□□□□ -1.69
SNX30Q5VWJ9 AC007435.1-201ENST00000421086 415 ntBASIC4.52□□□□□ -1.69
SNX30Q5VWJ9 AC004975.1-201ENST00000428733 208 ntBASIC4.52□□□□□ -1.69
SNX30Q5VWJ9 NANOGP6-201ENST00000429190 847 ntBASIC4.52□□□□□ -1.69
SNX30Q5VWJ9 SEPT7P5-201ENST00000434048 306 ntBASIC4.52□□□□□ -1.69
SNX30Q5VWJ9 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.52□□□□□ -1.69
SNX30Q5VWJ9 EEF1A1P39-201ENST00000440791 250 ntBASIC4.52□□□□□ -1.69
SNX30Q5VWJ9 OR10R1P-201ENST00000441524 1141 ntBASIC4.52□□□□□ -1.69
SNX30Q5VWJ9 AL589880.1-201ENST00000448271 287 ntBASIC4.52□□□□□ -1.69
SNX30Q5VWJ9 AL451050.1-201ENST00000450126 415 ntBASIC4.52□□□□□ -1.69
SNX30Q5VWJ9 PPIAP3-201ENST00000450588 505 ntBASIC4.52□□□□□ -1.69
SNX30Q5VWJ9 OFD1P7Y-201ENST00000454643 1155 ntBASIC4.52□□□□□ -1.69
SNX30Q5VWJ9 AC092155.2-201ENST00000454675 477 ntBASIC4.52□□□□□ -1.69
SNX30Q5VWJ9 RPL23AP81-201ENST00000455252 467 ntBASIC4.52□□□□□ -1.69
SNX30Q5VWJ9 RPL35AP15-201ENST00000468042 339 ntBASIC4.52□□□□□ -1.69
SNX30Q5VWJ9 AC090013.1-201ENST00000485147 480 ntBASIC4.52□□□□□ -1.69
SNX30Q5VWJ9 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC4.52□□□□□ -1.69
SNX30Q5VWJ9 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.52□□□□□ -1.69
SNX30Q5VWJ9 KLRA1P-201ENST00000503499 986 ntBASIC4.52□□□□□ -1.69
SNX30Q5VWJ9 PRELID3BP7-201ENST00000503606 469 ntBASIC4.52□□□□□ -1.69
SNX30Q5VWJ9 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.52□□□□□ -1.69
SNX30Q5VWJ9 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.52□□□□□ -1.69
SNX30Q5VWJ9 RNA5SP49-201ENST00000516450 115 ntBASIC4.52□□□□□ -1.69
SNX30Q5VWJ9 RN7SKP21-201ENST00000516503 220 ntBASIC4.52□□□□□ -1.69
SNX30Q5VWJ9 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.52□□□□□ -1.69
SNX30Q5VWJ9 TOMM20P2-201ENST00000540082 421 ntBASIC4.52□□□□□ -1.69
SNX30Q5VWJ9 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.52□□□□□ -1.69
SNX30Q5VWJ9 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
SNX30Q5VWJ9 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.52□□□□□ -1.69
SNX30Q5VWJ9 LSM6P2-201ENST00000552208 177 ntBASIC4.52□□□□□ -1.69
SNX30Q5VWJ9 AGGF1P8-201ENST00000562979 1000 ntBASIC4.52□□□□□ -1.69
SNX30Q5VWJ9 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SNX30Q5VWJ9 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC4.52□□□□□ -1.69
SNX30Q5VWJ9 VN1R83P-201ENST00000595685 445 ntBASIC4.52□□□□□ -1.69
SNX30Q5VWJ9 AC010680.3-201ENST00000604215 520 ntBASIC4.52□□□□□ -1.69
SNX30Q5VWJ9 RNU4-5P-201ENST00000607255 135 ntBASIC4.52□□□□□ -1.69
SNX30Q5VWJ9 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms