Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
CDC42BPAQ5VT25 ZNF90P1-201ENST00000480493 1951 ntBASIC4.68□□□□□ -1.66
CDC42BPAQ5VT25 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.68□□□□□ -1.66
CDC42BPAQ5VT25 XGY1-201ENST00000381172 446 ntBASIC4.68□□□□□ -1.66
CDC42BPAQ5VT25 RPL12P26-201ENST00000452430 487 ntBASIC4.68□□□□□ -1.66
CDC42BPAQ5VT25 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.68□□□□□ -1.66
CDC42BPAQ5VT25 RFPL4AP5-201ENST00000514977 504 ntBASIC4.68□□□□□ -1.66
CDC42BPAQ5VT25 IGLVIV-53-201ENST00000520107 367 ntBASIC4.68□□□□□ -1.66
CDC42BPAQ5VT25 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC4.68□□□□□ -1.66
CDC42BPAQ5VT25 AC007998.5-201ENST00000622938 237 ntBASIC4.68□□□□□ -1.66
CDC42BPAQ5VT25 AL137790.1-201ENST00000634283 177 ntBASIC4.68□□□□□ -1.66
CDC42BPAQ5VT25 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CDC42BPAQ5VT25 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CDC42BPAQ5VT25 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CDC42BPAQ5VT25 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC4.67□□□□□ -1.66
CDC42BPAQ5VT25 RN7SKP222-201ENST00000410651 315 ntBASIC4.67□□□□□ -1.66
CDC42BPAQ5VT25 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC4.67□□□□□ -1.66
CDC42BPAQ5VT25 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC4.67□□□□□ -1.66
CDC42BPAQ5VT25 GLRXP1-201ENST00000423261 334 ntBASIC4.67□□□□□ -1.66
CDC42BPAQ5VT25 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC4.67□□□□□ -1.66
CDC42BPAQ5VT25 RPS6P4-201ENST00000494693 758 ntBASIC4.67□□□□□ -1.66
CDC42BPAQ5VT25 HMGB1P3-201ENST00000502802 616 ntBASIC4.67□□□□□ -1.66
CDC42BPAQ5VT25 AC027309.2-201ENST00000520566 192 ntBASIC4.67□□□□□ -1.66
CDC42BPAQ5VT25 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CDC42BPAQ5VT25 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC4.67□□□□□ -1.66
CDC42BPAQ5VT25 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.67□□□□□ -1.66
CDC42BPAQ5VT25 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.67□□□□□ -1.66
CDC42BPAQ5VT25 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.67□□□□□ -1.66
CDC42BPAQ5VT25 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CDC42BPAQ5VT25 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
CDC42BPAQ5VT25 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CDC42BPAQ5VT25 U3.12-201ENST00000364498 214 ntBASIC4.66□□□□□ -1.66
CDC42BPAQ5VT25 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.66□□□□□ -1.66
CDC42BPAQ5VT25 RPL7P25-201ENST00000404151 721 ntBASIC4.66□□□□□ -1.66
CDC42BPAQ5VT25 RNA5SP184-201ENST00000411071 108 ntBASIC4.66□□□□□ -1.66
CDC42BPAQ5VT25 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC4.66□□□□□ -1.66
CDC42BPAQ5VT25 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC4.66□□□□□ -1.66
CDC42BPAQ5VT25 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.66□□□□□ -1.66
CDC42BPAQ5VT25 RN7SL429P-201ENST00000479090 223 ntBASIC4.66□□□□□ -1.66
CDC42BPAQ5VT25 RN7SL489P-201ENST00000486185 223 ntBASIC4.66□□□□□ -1.66
CDC42BPAQ5VT25 RN7SL327P-201ENST00000488659 223 ntBASIC4.66□□□□□ -1.66
CDC42BPAQ5VT25 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC4.66□□□□□ -1.66
CDC42BPAQ5VT25 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CDC42BPAQ5VT25 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.66□□□□□ -1.66
CDC42BPAQ5VT25 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC4.66□□□□□ -1.66
CDC42BPAQ5VT25 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC4.66□□□□□ -1.66
CDC42BPAQ5VT25 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.66□□□□□ -1.66
CDC42BPAQ5VT25 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.66□□□□□ -1.66
CDC42BPAQ5VT25 RN7SL853P-201ENST00000617250 223 ntBASIC4.66□□□□□ -1.66
CDC42BPAQ5VT25 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CDC42BPAQ5VT25 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC4.66□□□□□ -1.66
CDC42BPAQ5VT25 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CDC42BPAQ5VT25 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CDC42BPAQ5VT25 NACA3P-201ENST00000359690 648 ntBASIC4.66□□□□□ -1.66
CDC42BPAQ5VT25 MIR22-201ENST00000362190 85 ntBASIC4.66□□□□□ -1.66
CDC42BPAQ5VT25 AL353692.2-201ENST00000407054 335 ntBASIC4.66□□□□□ -1.66
CDC42BPAQ5VT25 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC4.66□□□□□ -1.66
CDC42BPAQ5VT25 AL109933.2-201ENST00000452651 260 ntBASIC4.66□□□□□ -1.66
CDC42BPAQ5VT25 AC004924.1-201ENST00000480160 781 ntBASIC4.66□□□□□ -1.66
CDC42BPAQ5VT25 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.66□□□□□ -1.66
CDC42BPAQ5VT25 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.66□□□□□ -1.66
CDC42BPAQ5VT25 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.66□□□□□ -1.66
CDC42BPAQ5VT25 AC022146.1-201ENST00000595307 847 ntBASIC4.66□□□□□ -1.66
CDC42BPAQ5VT25 AL390838.2-201ENST00000602394 274 ntBASIC4.66□□□□□ -1.66
CDC42BPAQ5VT25 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CDC42BPAQ5VT25 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CDC42BPAQ5VT25 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.65□□□□□ -1.66
CDC42BPAQ5VT25 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
CDC42BPAQ5VT25 AC011503.2-201ENST00000594230 1500 ntBASIC4.65□□□□□ -1.66
CDC42BPAQ5VT25 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC4.65□□□□□ -1.66
CDC42BPAQ5VT25 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CDC42BPAQ5VT25 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CDC42BPAQ5VT25 LAP3P1-201ENST00000403648 294 ntBASIC4.65□□□□□ -1.67
CDC42BPAQ5VT25 AL592148.1-201ENST00000413568 445 ntBASIC4.65□□□□□ -1.67
CDC42BPAQ5VT25 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.65□□□□□ -1.67
CDC42BPAQ5VT25 AC034159.1-201ENST00000513885 583 ntBASIC4.65□□□□□ -1.67
CDC42BPAQ5VT25 MIR2276-201ENST00000516886 89 ntBASIC4.65□□□□□ -1.67
CDC42BPAQ5VT25 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CDC42BPAQ5VT25 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.65□□□□□ -1.67
CDC42BPAQ5VT25 AL512310.1-201ENST00000548639 172 ntBASIC4.65□□□□□ -1.67
CDC42BPAQ5VT25 HMGB1P6-201ENST00000569046 646 ntBASIC4.65□□□□□ -1.67
CDC42BPAQ5VT25 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
CDC42BPAQ5VT25 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC4.65□□□□□ -1.67
CDC42BPAQ5VT25 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.67
CDC42BPAQ5VT25 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
CDC42BPAQ5VT25 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CDC42BPAQ5VT25 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CDC42BPAQ5VT25 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
CDC42BPAQ5VT25 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
CDC42BPAQ5VT25 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDC42BPAQ5VT25 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
CDC42BPAQ5VT25 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDC42BPAQ5VT25 RNU6-55P-201ENST00000411092 107 ntBASIC4.64□□□□□ -1.67
CDC42BPAQ5VT25 RNU6-954P-201ENST00000411355 107 ntBASIC4.64□□□□□ -1.67
CDC42BPAQ5VT25 ISCA1P2-201ENST00000438679 421 ntBASIC4.64□□□□□ -1.67
CDC42BPAQ5VT25 HIGD1AP13-201ENST00000509878 289 ntBASIC4.64□□□□□ -1.67
CDC42BPAQ5VT25 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.64□□□□□ -1.67
CDC42BPAQ5VT25 AC024153.1-201ENST00000603103 365 ntBASIC4.64□□□□□ -1.67
CDC42BPAQ5VT25 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC4.64□□□□□ -1.67
CDC42BPAQ5VT25 AC013412.1-201ENST00000610687 192 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms