Protein–RNA interactions for Protein: Q01064

PDE1B, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1B, humanhuman

Predictions only

Length 536 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1BQ01064 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
PDE1BQ01064 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
PDE1BQ01064 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PDE1BQ01064 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PDE1BQ01064 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
PDE1BQ01064 AC126755.2-208ENST00000327792 462 ntBASIC4.34□□□□□ -1.71
PDE1BQ01064 AC138969.1-213ENST00000331436 462 ntBASIC4.34□□□□□ -1.71
PDE1BQ01064 snoZ40.1-201ENST00000364540 72 ntBASIC4.34□□□□□ -1.71
PDE1BQ01064 RNA5SP509-201ENST00000364577 119 ntBASIC4.34□□□□□ -1.71
PDE1BQ01064 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.34□□□□□ -1.71
PDE1BQ01064 AL138878.1-201ENST00000405131 347 ntBASIC4.34□□□□□ -1.71
PDE1BQ01064 RNU4-25P-201ENST00000410569 230 ntBASIC4.34□□□□□ -1.71
PDE1BQ01064 RNU2-6P-201ENST00000411404 190 ntBASIC4.34□□□□□ -1.71
PDE1BQ01064 ELOCP9-201ENST00000418624 239 ntBASIC4.34□□□□□ -1.71
PDE1BQ01064 HMGB1P49-201ENST00000418882 569 ntBASIC4.34□□□□□ -1.71
PDE1BQ01064 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.34□□□□□ -1.71
PDE1BQ01064 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.34□□□□□ -1.71
PDE1BQ01064 AL592293.2-201ENST00000422292 996 ntBASIC4.34□□□□□ -1.71
PDE1BQ01064 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.34□□□□□ -1.71
PDE1BQ01064 RPF2P1-201ENST00000424137 906 ntBASIC4.34□□□□□ -1.71
PDE1BQ01064 OR5AW1P-201ENST00000426334 1006 ntBASIC4.34□□□□□ -1.71
PDE1BQ01064 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.34□□□□□ -1.71
PDE1BQ01064 YWHAQP9-201ENST00000445891 512 ntBASIC4.34□□□□□ -1.71
PDE1BQ01064 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC4.34□□□□□ -1.71
PDE1BQ01064 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.34□□□□□ -1.71
PDE1BQ01064 RPL23AP81-201ENST00000455252 467 ntBASIC4.34□□□□□ -1.71
PDE1BQ01064 RPL7P22-201ENST00000466005 733 ntBASIC4.34□□□□□ -1.71
PDE1BQ01064 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
PDE1BQ01064 AC011276.1-201ENST00000469688 323 ntBASIC4.34□□□□□ -1.71
PDE1BQ01064 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.34□□□□□ -1.71
PDE1BQ01064 MTND6P6-201ENST00000478031 263 ntBASIC4.34□□□□□ -1.71
PDE1BQ01064 RN7SKP122-201ENST00000515923 296 ntBASIC4.34□□□□□ -1.71
PDE1BQ01064 MIR2114-201ENST00000516645 80 ntBASIC4.34□□□□□ -1.71
PDE1BQ01064 IGLVIV-65-201ENST00000517313 360 ntBASIC4.34□□□□□ -1.71
PDE1BQ01064 AC023632.1-201ENST00000518463 375 ntBASIC4.34□□□□□ -1.71
PDE1BQ01064 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.34□□□□□ -1.71
PDE1BQ01064 IGKV2-36-201ENST00000519999 223 ntBASIC4.34□□□□□ -1.71
PDE1BQ01064 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC4.34□□□□□ -1.71
PDE1BQ01064 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.34□□□□□ -1.71
PDE1BQ01064 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PDE1BQ01064 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.34□□□□□ -1.71
PDE1BQ01064 AC092747.2-201ENST00000545069 983 ntBASIC4.34□□□□□ -1.71
PDE1BQ01064 DUXAP6-201ENST00000553858 601 ntBASIC4.34□□□□□ -1.71
PDE1BQ01064 AC090751.1-201ENST00000566966 267 ntBASIC4.34□□□□□ -1.71
PDE1BQ01064 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.34□□□□□ -1.71
PDE1BQ01064 MIR5708-201ENST00000579723 85 ntBASIC4.34□□□□□ -1.71
PDE1BQ01064 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.34□□□□□ -1.71
PDE1BQ01064 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC4.34□□□□□ -1.71
PDE1BQ01064 AP001542.2-201ENST00000593141 364 ntBASIC4.34□□□□□ -1.71
PDE1BQ01064 MIR432-201ENST00000606207 94 ntBASIC4.34□□□□□ -1.71
PDE1BQ01064 AC007349.4-201ENST00000608114 532 ntBASIC4.34□□□□□ -1.71
PDE1BQ01064 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC4.34□□□□□ -1.71
PDE1BQ01064 AP005137.2-201ENST00000609238 400 ntBASIC4.34□□□□□ -1.71
PDE1BQ01064 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.34□□□□□ -1.71
PDE1BQ01064 AL592148.2-201ENST00000612210 372 ntBASIC4.34□□□□□ -1.71
PDE1BQ01064 AC000123.2-201ENST00000623124 461 ntBASIC4.34□□□□□ -1.71
PDE1BQ01064 AC109454.4-201ENST00000623411 649 ntBASIC4.34□□□□□ -1.71
PDE1BQ01064 AC092608.3-201ENST00000625017 386 ntBASIC4.34□□□□□ -1.71
PDE1BQ01064 MFSD8-245ENST00000641743 948 ntBASIC4.34□□□□□ -1.71
PDE1BQ01064 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PDE1BQ01064 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC4.34□□□□□ -1.71
PDE1BQ01064 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.34□□□□□ -1.71
PDE1BQ01064 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PDE1BQ01064 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
PDE1BQ01064 EIF2AP4-201ENST00000424793 1781 ntBASIC4.34□□□□□ -1.71
PDE1BQ01064 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
PDE1BQ01064 NOL8P1-201ENST00000508336 3529 ntBASIC4.34□□□□□ -1.72
PDE1BQ01064 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.33□□□□□ -1.72
PDE1BQ01064 AC018555.1-201ENST00000567548 1980 ntBASIC4.33□□□□□ -1.72
PDE1BQ01064 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PDE1BQ01064 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
PDE1BQ01064 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.33□□□□□ -1.72
PDE1BQ01064 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.33□□□□□ -1.72
PDE1BQ01064 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
PDE1BQ01064 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
PDE1BQ01064 NF1-214ENST00000490416 1329 ntTSL 3 BASIC4.33□□□□□ -1.72
PDE1BQ01064 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
PDE1BQ01064 MIR331-201ENST00000362302 94 ntBASIC4.33□□□□□ -1.72
PDE1BQ01064 RNA5SP388-201ENST00000362584 119 ntBASIC4.33□□□□□ -1.72
PDE1BQ01064 AC119751.3-201ENST00000399720 670 ntBASIC4.33□□□□□ -1.72
PDE1BQ01064 MTCO2P31-201ENST00000402702 684 ntBASIC4.33□□□□□ -1.72
PDE1BQ01064 MIR1183-201ENST00000408856 89 ntBASIC4.33□□□□□ -1.72
PDE1BQ01064 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC4.33□□□□□ -1.72
PDE1BQ01064 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC4.33□□□□□ -1.72
PDE1BQ01064 RWDD4P2-201ENST00000426392 563 ntBASIC4.33□□□□□ -1.72
PDE1BQ01064 AL732292.1-201ENST00000426692 226 ntBASIC4.33□□□□□ -1.72
PDE1BQ01064 HIGD1AP4-201ENST00000430194 280 ntBASIC4.33□□□□□ -1.72
PDE1BQ01064 RPL7P4-203ENST00000430239 730 ntBASIC4.33□□□□□ -1.72
PDE1BQ01064 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC4.33□□□□□ -1.72
PDE1BQ01064 ELOCP18-201ENST00000434209 337 ntBASIC4.33□□□□□ -1.72
PDE1BQ01064 HSD52-202ENST00000436225 772 ntTSL 3 BASIC4.33□□□□□ -1.72
PDE1BQ01064 GSTA7P-201ENST00000438425 448 ntBASIC4.33□□□□□ -1.72
PDE1BQ01064 UBE2V1P5-201ENST00000440070 405 ntBASIC4.33□□□□□ -1.72
PDE1BQ01064 MTATP6P26-201ENST00000445926 662 ntBASIC4.33□□□□□ -1.72
PDE1BQ01064 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.33□□□□□ -1.72
PDE1BQ01064 MTCYBP11-201ENST00000447254 1109 ntBASIC4.33□□□□□ -1.72
PDE1BQ01064 HMGB3P21-201ENST00000452483 547 ntBASIC4.33□□□□□ -1.72
PDE1BQ01064 MRPL35P4-201ENST00000453682 566 ntBASIC4.33□□□□□ -1.72
PDE1BQ01064 BX248409.1-201ENST00000455497 255 ntBASIC4.33□□□□□ -1.72
PDE1BQ01064 RPL23AP71-201ENST00000470966 469 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms