Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
PRKDCP78527 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
PRKDCP78527 AC134882.1-201ENST00000603738 1676 ntBASIC2.24□□□□□ -2.05
PRKDCP78527 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.24□□□□□ -2.05
PRKDCP78527 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.24□□□□□ -2.05
PRKDCP78527 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
PRKDCP78527 MTND4P2-201ENST00000507767 1203 ntBASIC2.24□□□□□ -2.05
PRKDCP78527 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC2.24□□□□□ -2.05
PRKDCP78527 uc_338.25-201ENST00000613756 156 ntBASIC2.24□□□□□ -2.05
PRKDCP78527 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
PRKDCP78527 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
PRKDCP78527 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.24□□□□□ -2.05
PRKDCP78527 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC2.24□□□□□ -2.05
PRKDCP78527 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC2.24□□□□□ -2.05
PRKDCP78527 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
PRKDCP78527 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
PRKDCP78527 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.24□□□□□ -2.05
PRKDCP78527 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
PRKDCP78527 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.24□□□□□ -2.05
PRKDCP78527 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.24□□□□□ -2.05
PRKDCP78527 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC2.24□□□□□ -2.05
PRKDCP78527 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC2.24□□□□□ -2.05
PRKDCP78527 MRPS35P3-201ENST00000603189 709 ntBASIC2.24□□□□□ -2.05
PRKDCP78527 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC2.24□□□□□ -2.05
PRKDCP78527 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC2.24□□□□□ -2.05
PRKDCP78527 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
PRKDCP78527 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC2.24□□□□□ -2.05
PRKDCP78527 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC2.24□□□□□ -2.05
PRKDCP78527 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC2.24□□□□□ -2.05
PRKDCP78527 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC2.24□□□□□ -2.05
PRKDCP78527 AL161781.1-201ENST00000354277 403 ntBASIC2.24□□□□□ -2.05
PRKDCP78527 MIR9-1-201ENST00000385198 89 ntBASIC2.24□□□□□ -2.05
PRKDCP78527 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC2.24□□□□□ -2.05
PRKDCP78527 AC099489.2-201ENST00000574976 260 ntBASIC2.24□□□□□ -2.05
PRKDCP78527 AC233702.9-201ENST00000581528 203 ntBASIC2.24□□□□□ -2.05
PRKDCP78527 AC092184.1-201ENST00000625042 715 ntBASIC2.24□□□□□ -2.05
PRKDCP78527 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
PRKDCP78527 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
PRKDCP78527 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.24□□□□□ -2.05
PRKDCP78527 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC2.24□□□□□ -2.05
PRKDCP78527 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
PRKDCP78527 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
PRKDCP78527 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC2.23□□□□□ -2.05
PRKDCP78527 MIR93-201ENST00000385024 80 ntBASIC2.23□□□□□ -2.05
PRKDCP78527 U3.23-201ENST00000391132 200 ntBASIC2.23□□□□□ -2.05
PRKDCP78527 ETF1P3-201ENST00000430422 1160 ntBASIC2.23□□□□□ -2.05
PRKDCP78527 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.23□□□□□ -2.05
PRKDCP78527 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC2.23□□□□□ -2.05
PRKDCP78527 RPL23AP73-201ENST00000492507 471 ntBASIC2.23□□□□□ -2.05
PRKDCP78527 RN7SKP209-201ENST00000516888 304 ntBASIC2.23□□□□□ -2.05
PRKDCP78527 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC2.23□□□□□ -2.05
PRKDCP78527 AL392112.1-201ENST00000605115 829 ntBASIC2.23□□□□□ -2.05
PRKDCP78527 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC2.23□□□□□ -2.05
PRKDCP78527 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
PRKDCP78527 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
PRKDCP78527 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC2.23□□□□□ -2.05
PRKDCP78527 AC000123.3-201ENST00000624029 4975 ntBASIC2.23□□□□□ -2.05
PRKDCP78527 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
PRKDCP78527 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
PRKDCP78527 PARD3-204ENST00000374768 799 ntTSL 3 BASIC2.23□□□□□ -2.05
PRKDCP78527 RNA5SP104-201ENST00000410989 118 ntBASIC2.23□□□□□ -2.05
PRKDCP78527 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC2.23□□□□□ -2.05
PRKDCP78527 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.23□□□□□ -2.05
PRKDCP78527 SNRPGP5-201ENST00000456003 220 ntBASIC2.23□□□□□ -2.05
PRKDCP78527 AC008565.1-201ENST00000509046 885 ntBASIC2.23□□□□□ -2.05
PRKDCP78527 AL121766.1-201ENST00000547436 487 ntBASIC2.23□□□□□ -2.05
PRKDCP78527 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC2.23□□□□□ -2.05
PRKDCP78527 MIR4648-201ENST00000580107 72 ntBASIC2.23□□□□□ -2.05
PRKDCP78527 AL732372.2-225ENST00000642124 456 ntBASIC2.23□□□□□ -2.05
PRKDCP78527 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
PRKDCP78527 AC105402.1-201ENST00000413336 545 ntBASIC2.23□□□□□ -2.05
PRKDCP78527 UBE2D3P1-201ENST00000436669 444 ntBASIC2.23□□□□□ -2.05
PRKDCP78527 COX6CP8-201ENST00000522620 226 ntBASIC2.23□□□□□ -2.05
PRKDCP78527 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC2.23□□□□□ -2.05
PRKDCP78527 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC2.23□□□□□ -2.05
PRKDCP78527 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
PRKDCP78527 THAP12P8-201ENST00000447914 2115 ntBASIC2.23□□□□□ -2.05
PRKDCP78527 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
PRKDCP78527 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
PRKDCP78527 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC2.23□□□□□ -2.05
PRKDCP78527 FTX-210ENST00000603037 8347 ntTSL 5 BASIC2.23□□□□□ -2.05
PRKDCP78527 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
PRKDCP78527 RNA5SP99-201ENST00000364020 114 ntBASIC2.23□□□□□ -2.05
PRKDCP78527 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.23□□□□□ -2.05
PRKDCP78527 AC245517.4-201ENST00000448601 281 ntBASIC2.23□□□□□ -2.05
PRKDCP78527 AC078785.3-201ENST00000476607 425 ntBASIC2.23□□□□□ -2.05
PRKDCP78527 METTL15P1-201ENST00000481421 1045 ntBASIC2.23□□□□□ -2.05
PRKDCP78527 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
PRKDCP78527 AC005798.1-201ENST00000513715 387 ntBASIC2.23□□□□□ -2.05
PRKDCP78527 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.23□□□□□ -2.05
PRKDCP78527 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC2.23□□□□□ -2.05
PRKDCP78527 AC020914.4-201ENST00000597690 277 ntBASIC2.23□□□□□ -2.05
PRKDCP78527 MIR486-1-201ENST00000612171 68 ntBASIC2.23□□□□□ -2.05
PRKDCP78527 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.23□□□□□ -2.05
PRKDCP78527 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC2.23□□□□□ -2.05
PRKDCP78527 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
PRKDCP78527 SYF2-202ENST00000354361 926 ntTSL 2 BASIC2.22□□□□□ -2.05
PRKDCP78527 AC063976.3-201ENST00000426849 329 ntBASIC2.22□□□□□ -2.05
PRKDCP78527 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC2.22□□□□□ -2.05
PRKDCP78527 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms