Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 AC010301.1-201ENST00000473936 355 ntBASIC4.33□□□□□ -1.72
PRAMEP78395 AC013828.1-201ENST00000481845 158 ntBASIC4.33□□□□□ -1.72
PRAMEP78395 AC114322.1-201ENST00000506771 926 ntBASIC4.33□□□□□ -1.72
PRAMEP78395 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PRAMEP78395 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC4.33□□□□□ -1.72
PRAMEP78395 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.33□□□□□ -1.72
PRAMEP78395 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.33□□□□□ -1.72
PRAMEP78395 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC4.33□□□□□ -1.72
PRAMEP78395 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.33□□□□□ -1.72
PRAMEP78395 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.33□□□□□ -1.72
PRAMEP78395 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC4.33□□□□□ -1.72
PRAMEP78395 AC090502.2-201ENST00000549267 280 ntBASIC4.33□□□□□ -1.72
PRAMEP78395 AC137768.1-201ENST00000549998 553 ntBASIC4.33□□□□□ -1.72
PRAMEP78395 MTCYBP27-201ENST00000555160 670 ntBASIC4.33□□□□□ -1.72
PRAMEP78395 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.33□□□□□ -1.72
PRAMEP78395 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.33□□□□□ -1.72
PRAMEP78395 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.33□□□□□ -1.72
PRAMEP78395 AC069366.1-201ENST00000583159 838 ntBASIC4.33□□□□□ -1.72
PRAMEP78395 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PRAMEP78395 AC115621.1-201ENST00000604653 858 ntBASIC4.33□□□□□ -1.72
PRAMEP78395 AC113403.1-201ENST00000604910 193 ntBASIC4.33□□□□□ -1.72
PRAMEP78395 AC090948.1-201ENST00000607464 549 ntBASIC4.33□□□□□ -1.72
PRAMEP78395 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.33□□□□□ -1.72
PRAMEP78395 MIR7703-201ENST00000620784 77 ntBASIC4.33□□□□□ -1.72
PRAMEP78395 MIR4496-201ENST00000635896 61 ntBASIC4.33□□□□□ -1.72
PRAMEP78395 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PRAMEP78395 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.33□□□□□ -1.72
PRAMEP78395 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PRAMEP78395 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.33□□□□□ -1.72
PRAMEP78395 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PRAMEP78395 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PRAMEP78395 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PRAMEP78395 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
PRAMEP78395 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
PRAMEP78395 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PRAMEP78395 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
PRAMEP78395 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
PRAMEP78395 RNU5D-1-201ENST00000363299 116 ntBASIC4.32□□□□□ -1.72
PRAMEP78395 RHOT1P2-201ENST00000366423 333 ntBASIC4.32□□□□□ -1.72
PRAMEP78395 RNU6-657P-201ENST00000383904 107 ntBASIC4.32□□□□□ -1.72
PRAMEP78395 SNORA70E-201ENST00000384492 135 ntBASIC4.32□□□□□ -1.72
PRAMEP78395 MIR93-201ENST00000385024 80 ntBASIC4.32□□□□□ -1.72
PRAMEP78395 SNORD66.1-201ENST00000391230 76 ntBASIC4.32□□□□□ -1.72
PRAMEP78395 SNORA11F-201ENST00000408237 128 ntBASIC4.32□□□□□ -1.72
PRAMEP78395 RNA5SP104-201ENST00000410989 118 ntBASIC4.32□□□□□ -1.72
PRAMEP78395 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.32□□□□□ -1.72
PRAMEP78395 NRBF2P2-201ENST00000413087 861 ntBASIC4.32□□□□□ -1.72
PRAMEP78395 LUZP4P1-201ENST00000415420 344 ntBASIC4.32□□□□□ -1.72
PRAMEP78395 AL139095.3-201ENST00000419672 1203 ntBASIC4.32□□□□□ -1.72
PRAMEP78395 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.32□□□□□ -1.72
PRAMEP78395 HSD52-202ENST00000436225 772 ntTSL 3 BASIC4.32□□□□□ -1.72
PRAMEP78395 RFC5P1-201ENST00000454419 874 ntBASIC4.32□□□□□ -1.72
PRAMEP78395 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC4.32□□□□□ -1.72
PRAMEP78395 NDUFA12P1-201ENST00000455914 406 ntBASIC4.32□□□□□ -1.72
PRAMEP78395 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC4.32□□□□□ -1.72
PRAMEP78395 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.32□□□□□ -1.72
PRAMEP78395 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC4.32□□□□□ -1.72
PRAMEP78395 AC007686.1-201ENST00000488511 463 ntBASIC4.32□□□□□ -1.72
PRAMEP78395 OR4G11P-201ENST00000492842 939 ntBASIC4.32□□□□□ -1.72
PRAMEP78395 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.32□□□□□ -1.72
PRAMEP78395 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.32□□□□□ -1.72
PRAMEP78395 MTCYBP16-201ENST00000509187 1129 ntBASIC4.32□□□□□ -1.72
PRAMEP78395 OR51K1P-201ENST00000510214 950 ntBASIC4.32□□□□□ -1.72
PRAMEP78395 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.32□□□□□ -1.72
PRAMEP78395 MTCYBP37-201ENST00000510642 1133 ntBASIC4.32□□□□□ -1.72
PRAMEP78395 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.32□□□□□ -1.72
PRAMEP78395 AC104057.1-201ENST00000515547 497 ntBASIC4.32□□□□□ -1.72
PRAMEP78395 RNU6-1225P-201ENST00000516336 65 ntBASIC4.32□□□□□ -1.72
PRAMEP78395 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.32□□□□□ -1.72
PRAMEP78395 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.32□□□□□ -1.72
PRAMEP78395 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC4.32□□□□□ -1.72
PRAMEP78395 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.32□□□□□ -1.72
PRAMEP78395 ARL2BPP5-201ENST00000523141 481 ntBASIC4.32□□□□□ -1.72
PRAMEP78395 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC4.32□□□□□ -1.72
PRAMEP78395 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.32□□□□□ -1.72
PRAMEP78395 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.32□□□□□ -1.72
PRAMEP78395 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.32□□□□□ -1.72
PRAMEP78395 TRAV15-201ENST00000556680 249 ntBASIC4.32□□□□□ -1.72
PRAMEP78395 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.32□□□□□ -1.72
PRAMEP78395 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.32□□□□□ -1.72
PRAMEP78395 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.32□□□□□ -1.72
PRAMEP78395 AC019193.2-201ENST00000610012 634 ntBASIC4.32□□□□□ -1.72
PRAMEP78395 AC078899.5-201ENST00000612475 178 ntBASIC4.32□□□□□ -1.72
PRAMEP78395 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
PRAMEP78395 AC023158.2-201ENST00000614876 543 ntBASIC4.32□□□□□ -1.72
PRAMEP78395 AC140479.6-201ENST00000633535 357 ntBASIC4.32□□□□□ -1.72
PRAMEP78395 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.32□□□□□ -1.72
PRAMEP78395 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
PRAMEP78395 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
PRAMEP78395 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
PRAMEP78395 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
PRAMEP78395 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PRAMEP78395 AL136964.1-201ENST00000622038 2990 ntBASIC4.32□□□□□ -1.72
PRAMEP78395 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PRAMEP78395 PNPT1P2-201ENST00000456768 2050 ntBASIC4.31□□□□□ -1.72
PRAMEP78395 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
PRAMEP78395 ZNF33CP-201ENST00000432492 2030 ntBASIC4.31□□□□□ -1.72
PRAMEP78395 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PRAMEP78395 OR11H5P-202ENST00000641612 1325 ntBASIC4.31□□□□□ -1.72
PRAMEP78395 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms