Protein–RNA interactions for Protein: P63316

TNNC1, Troponin C, slow skeletal and cardiac muscles, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNC1P63316 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.8□□□□□ -1.8
TNNC1P63316 U3.39-201ENST00000408569 239 ntBASIC3.8□□□□□ -1.8
TNNC1P63316 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC3.8□□□□□ -1.8
TNNC1P63316 AC004022.2-201ENST00000413824 193 ntBASIC3.8□□□□□ -1.8
TNNC1P63316 DBIP2-201ENST00000419076 262 ntBASIC3.8□□□□□ -1.8
TNNC1P63316 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC3.8□□□□□ -1.8
TNNC1P63316 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.8□□□□□ -1.8
TNNC1P63316 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.8□□□□□ -1.8
TNNC1P63316 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC3.8□□□□□ -1.8
TNNC1P63316 MTND2P8-201ENST00000450555 1025 ntBASIC3.8□□□□□ -1.8
TNNC1P63316 AC010401.1-201ENST00000463867 348 ntBASIC3.8□□□□□ -1.8
TNNC1P63316 RPL6P9-201ENST00000466502 859 ntBASIC3.8□□□□□ -1.8
TNNC1P63316 AC087312.1-201ENST00000471411 480 ntBASIC3.8□□□□□ -1.8
TNNC1P63316 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.8□□□□□ -1.8
TNNC1P63316 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC3.8□□□□□ -1.8
TNNC1P63316 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
TNNC1P63316 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC3.8□□□□□ -1.8
TNNC1P63316 SNX5P1-201ENST00000505757 1041 ntBASIC3.8□□□□□ -1.8
TNNC1P63316 HMGN1P15-201ENST00000513870 295 ntBASIC3.8□□□□□ -1.8
TNNC1P63316 RNU2-27P-201ENST00000516185 142 ntBASIC3.8□□□□□ -1.8
TNNC1P63316 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
TNNC1P63316 AP006245.1-201ENST00000522549 120 ntBASIC3.8□□□□□ -1.8
TNNC1P63316 AP001636.2-201ENST00000525517 696 ntBASIC3.8□□□□□ -1.8
TNNC1P63316 AC103843.2-201ENST00000530523 682 ntBASIC3.8□□□□□ -1.8
TNNC1P63316 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TNNC1P63316 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.8□□□□□ -1.8
TNNC1P63316 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.8□□□□□ -1.8
TNNC1P63316 AL049874.4-201ENST00000557593 255 ntBASIC3.8□□□□□ -1.8
TNNC1P63316 AC092868.3-201ENST00000560515 784 ntBASIC3.8□□□□□ -1.8
TNNC1P63316 AP004372.1-201ENST00000604842 844 ntBASIC3.8□□□□□ -1.8
TNNC1P63316 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.8□□□□□ -1.8
TNNC1P63316 AC022149.2-201ENST00000621061 203 ntBASIC3.8□□□□□ -1.8
TNNC1P63316 AC243312.2-201ENST00000623340 601 ntBASIC3.8□□□□□ -1.8
TNNC1P63316 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.8□□□□□ -1.8
TNNC1P63316 AC068647.1-201ENST00000489539 2265 ntBASIC3.8□□□□□ -1.8
TNNC1P63316 AL365440.1-201ENST00000436135 2167 ntBASIC3.8□□□□□ -1.8
TNNC1P63316 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TNNC1P63316 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TNNC1P63316 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
TNNC1P63316 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TNNC1P63316 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TNNC1P63316 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TNNC1P63316 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
TNNC1P63316 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.79□□□□□ -1.8
TNNC1P63316 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
TNNC1P63316 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TNNC1P63316 MIR30E-201ENST00000362104 92 ntBASIC3.79□□□□□ -1.8
TNNC1P63316 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.79□□□□□ -1.8
TNNC1P63316 AP002088.1-201ENST00000382740 395 ntBASIC3.79□□□□□ -1.8
TNNC1P63316 RNU6-317P-201ENST00000384031 107 ntBASIC3.79□□□□□ -1.8
TNNC1P63316 MIR23B-201ENST00000384832 97 ntBASIC3.79□□□□□ -1.8
TNNC1P63316 RNU2-65P-201ENST00000410162 185 ntBASIC3.79□□□□□ -1.8
TNNC1P63316 PRELID3BP11-201ENST00000414230 479 ntBASIC3.79□□□□□ -1.8
TNNC1P63316 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.79□□□□□ -1.8
TNNC1P63316 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.79□□□□□ -1.8
TNNC1P63316 RPL37P1-201ENST00000432310 284 ntBASIC3.79□□□□□ -1.8
TNNC1P63316 AL050321.1-201ENST00000432363 400 ntBASIC3.79□□□□□ -1.8
TNNC1P63316 RPL21P23-201ENST00000446654 460 ntBASIC3.79□□□□□ -1.8
TNNC1P63316 PDSS1P2-201ENST00000449397 678 ntBASIC3.79□□□□□ -1.8
TNNC1P63316 AC010468.1-201ENST00000461022 817 ntBASIC3.79□□□□□ -1.8
TNNC1P63316 AC084357.1-201ENST00000473404 255 ntBASIC3.79□□□□□ -1.8
TNNC1P63316 RPS4XP22-201ENST00000480755 780 ntBASIC3.79□□□□□ -1.8
TNNC1P63316 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.79□□□□□ -1.8
TNNC1P63316 AC006499.5-201ENST00000505037 514 ntBASIC3.79□□□□□ -1.8
TNNC1P63316 AC110768.1-201ENST00000509222 400 ntBASIC3.79□□□□□ -1.8
TNNC1P63316 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.79□□□□□ -1.8
TNNC1P63316 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TNNC1P63316 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.79□□□□□ -1.8
TNNC1P63316 AGGF1P8-201ENST00000562979 1000 ntBASIC3.79□□□□□ -1.8
TNNC1P63316 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.79□□□□□ -1.8
TNNC1P63316 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.79□□□□□ -1.8
TNNC1P63316 AC022146.1-201ENST00000595307 847 ntBASIC3.79□□□□□ -1.8
TNNC1P63316 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TNNC1P63316 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
TNNC1P63316 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
TNNC1P63316 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
TNNC1P63316 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TNNC1P63316 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.78□□□□□ -1.8
TNNC1P63316 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
TNNC1P63316 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
TNNC1P63316 FRG1CP-201ENST00000358464 769 ntBASIC3.78□□□□□ -1.8
TNNC1P63316 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.78□□□□□ -1.8
TNNC1P63316 RN7SKP53-201ENST00000411337 315 ntBASIC3.78□□□□□ -1.8
TNNC1P63316 MTND4P22-201ENST00000413116 1169 ntBASIC3.78□□□□□ -1.8
TNNC1P63316 AC068533.1-201ENST00000418542 415 ntBASIC3.78□□□□□ -1.8
TNNC1P63316 RPL31P45-201ENST00000419532 356 ntBASIC3.78□□□□□ -1.8
TNNC1P63316 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.78□□□□□ -1.8
TNNC1P63316 ELOCP6-201ENST00000429066 328 ntBASIC3.78□□□□□ -1.8
TNNC1P63316 AL035458.1-201ENST00000433096 585 ntBASIC3.78□□□□□ -1.8
TNNC1P63316 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.78□□□□□ -1.8
TNNC1P63316 AC092641.1-201ENST00000440229 772 ntBASIC3.78□□□□□ -1.8
TNNC1P63316 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.78□□□□□ -1.8
TNNC1P63316 ELOCP12-201ENST00000458706 328 ntBASIC3.78□□□□□ -1.8
TNNC1P63316 RN7SL594P-201ENST00000470590 287 ntBASIC3.78□□□□□ -1.8
TNNC1P63316 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
TNNC1P63316 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.78□□□□□ -1.8
TNNC1P63316 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.78□□□□□ -1.8
TNNC1P63316 OR5B10P-201ENST00000532869 642 ntBASIC3.78□□□□□ -1.8
TNNC1P63316 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.78□□□□□ -1.8
TNNC1P63316 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms