Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SUMO3P55854 AGGF1P4-201ENST00000568249 801 ntBASIC4.61□□□□□ -1.67
SUMO3P55854 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC4.61□□□□□ -1.67
SUMO3P55854 AL355812.1-201ENST00000603215 216 ntBASIC4.61□□□□□ -1.67
SUMO3P55854 AL390208.1-201ENST00000605885 644 ntBASIC4.61□□□□□ -1.67
SUMO3P55854 AC105429.2-201ENST00000610567 517 ntBASIC4.61□□□□□ -1.67
SUMO3P55854 AL512624.1-201ENST00000613638 469 ntBASIC4.61□□□□□ -1.67
SUMO3P55854 AC073968.1-201ENST00000618594 637 ntBASIC4.61□□□□□ -1.67
SUMO3P55854 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.61□□□□□ -1.67
SUMO3P55854 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.61□□□□□ -1.67
SUMO3P55854 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
SUMO3P55854 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SUMO3P55854 ZNF652P1-201ENST00000442420 1309 ntBASIC4.61□□□□□ -1.67
SUMO3P55854 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.61□□□□□ -1.67
SUMO3P55854 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SUMO3P55854 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
SUMO3P55854 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.61□□□□□ -1.67
SUMO3P55854 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SUMO3P55854 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.61□□□□□ -1.67
SUMO3P55854 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SUMO3P55854 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SUMO3P55854 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SUMO3P55854 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
SUMO3P55854 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
SUMO3P55854 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
SUMO3P55854 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
SUMO3P55854 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SUMO3P55854 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SUMO3P55854 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SUMO3P55854 RPL23P2-201ENST00000320371 421 ntBASIC4.6□□□□□ -1.67
SUMO3P55854 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
SUMO3P55854 RNU6-28P-201ENST00000362378 107 ntBASIC4.6□□□□□ -1.67
SUMO3P55854 RNU5E-5P-201ENST00000365379 116 ntBASIC4.6□□□□□ -1.67
SUMO3P55854 RNU6-769P-201ENST00000384407 104 ntBASIC4.6□□□□□ -1.67
SUMO3P55854 AL078599.1-201ENST00000402075 293 ntBASIC4.6□□□□□ -1.67
SUMO3P55854 MIR1250-201ENST00000408098 113 ntBASIC4.6□□□□□ -1.67
SUMO3P55854 RNU4-34P-201ENST00000410431 124 ntBASIC4.6□□□□□ -1.67
SUMO3P55854 MTCO1P17-201ENST00000411522 491 ntBASIC4.6□□□□□ -1.67
SUMO3P55854 AC007899.1-201ENST00000412776 775 ntBASIC4.6□□□□□ -1.67
SUMO3P55854 RPL31P45-201ENST00000419532 356 ntBASIC4.6□□□□□ -1.67
SUMO3P55854 RPL21P32-201ENST00000419877 477 ntBASIC4.6□□□□□ -1.67
SUMO3P55854 RPS24P1-201ENST00000438550 371 ntBASIC4.6□□□□□ -1.67
SUMO3P55854 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC4.6□□□□□ -1.67
SUMO3P55854 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SUMO3P55854 AP001992.1-205ENST00000462248 379 ntBASIC4.6□□□□□ -1.67
SUMO3P55854 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.6□□□□□ -1.67
SUMO3P55854 PRELID3BP7-201ENST00000503606 469 ntBASIC4.6□□□□□ -1.67
SUMO3P55854 ARL2BPP4-201ENST00000506854 471 ntBASIC4.6□□□□□ -1.67
SUMO3P55854 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC4.6□□□□□ -1.67
SUMO3P55854 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.6□□□□□ -1.67
SUMO3P55854 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.6□□□□□ -1.67
SUMO3P55854 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.6□□□□□ -1.67
SUMO3P55854 HIGD1AP3-201ENST00000515857 278 ntBASIC4.6□□□□□ -1.67
SUMO3P55854 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC4.6□□□□□ -1.67
SUMO3P55854 AP003033.1-201ENST00000527244 415 ntBASIC4.6□□□□□ -1.67
SUMO3P55854 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.6□□□□□ -1.67
SUMO3P55854 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.6□□□□□ -1.67
SUMO3P55854 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.6□□□□□ -1.67
SUMO3P55854 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.6□□□□□ -1.67
SUMO3P55854 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.6□□□□□ -1.67
SUMO3P55854 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.6□□□□□ -1.67
SUMO3P55854 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.6□□□□□ -1.67
SUMO3P55854 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC4.6□□□□□ -1.67
SUMO3P55854 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.6□□□□□ -1.67
SUMO3P55854 AL353997.4-201ENST00000586196 166 ntBASIC4.6□□□□□ -1.67
SUMO3P55854 AC006116.3-201ENST00000592968 361 ntBASIC4.6□□□□□ -1.67
SUMO3P55854 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.6□□□□□ -1.67
SUMO3P55854 BCRP9-201ENST00000605312 388 ntBASIC4.6□□□□□ -1.67
SUMO3P55854 AL139286.2-201ENST00000606838 396 ntBASIC4.6□□□□□ -1.67
SUMO3P55854 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.6□□□□□ -1.67
SUMO3P55854 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SUMO3P55854 AL590240.3-201ENST00000621416 943 ntBASIC4.6□□□□□ -1.67
SUMO3P55854 AL359715.5-201ENST00000623431 443 ntBASIC4.6□□□□□ -1.67
SUMO3P55854 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.6□□□□□ -1.67
SUMO3P55854 AL392088.2-201ENST00000637607 285 ntBASIC4.6□□□□□ -1.67
SUMO3P55854 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SUMO3P55854 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SUMO3P55854 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.6□□□□□ -1.67
SUMO3P55854 MAPK10-328ENST00000641553 4009 ntBASIC4.6□□□□□ -1.67
SUMO3P55854 KPNA2P2-201ENST00000419546 1489 ntBASIC4.6□□□□□ -1.67
SUMO3P55854 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC4.6□□□□□ -1.67
SUMO3P55854 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
SUMO3P55854 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SUMO3P55854 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
SUMO3P55854 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SUMO3P55854 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
SUMO3P55854 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SUMO3P55854 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SUMO3P55854 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SUMO3P55854 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SUMO3P55854 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SUMO3P55854 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
SUMO3P55854 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
SUMO3P55854 U8.4-201ENST00000363626 134 ntBASIC4.59□□□□□ -1.67
SUMO3P55854 RNU4-75P-201ENST00000364621 146 ntBASIC4.59□□□□□ -1.67
SUMO3P55854 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
SUMO3P55854 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.59□□□□□ -1.67
SUMO3P55854 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SUMO3P55854 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.59□□□□□ -1.67
SUMO3P55854 AC019155.1-201ENST00000382242 574 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms