Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
ATN1P54259 ADGRE4P-202ENST00000600751 2810 ntTSL 5 BASIC7.73□□□□□ -1.17
ATN1P54259 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
ATN1P54259 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
ATN1P54259 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC7.73□□□□□ -1.17
ATN1P54259 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
ATN1P54259 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
ATN1P54259 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
ATN1P54259 NSA2-205ENST00000610426 4594 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
ATN1P54259 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
ATN1P54259 AGL-201ENST00000294724 7446 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
ATN1P54259 SLC16A4-210ENST00000541986 2496 ntTSL 2 BASIC7.72□□□□□ -1.17
ATN1P54259 PRLR-219ENST00000619676 1402 ntTSL 5 BASIC7.72□□□□□ -1.17
ATN1P54259 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
ATN1P54259 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
ATN1P54259 SAMMSON-222ENST00000641901 2727 ntBASIC7.72□□□□□ -1.17
ATN1P54259 Y_RNA.275-201ENST00000364726 110 ntBASIC7.72□□□□□ -1.17
ATN1P54259 RNA5SP89-201ENST00000410300 108 ntBASIC7.72□□□□□ -1.17
ATN1P54259 AL030996.1-201ENST00000411430 235 ntBASIC7.72□□□□□ -1.17
ATN1P54259 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC7.72□□□□□ -1.17
ATN1P54259 DPPA2P2-201ENST00000418220 897 ntBASIC7.72□□□□□ -1.17
ATN1P54259 UQCRHP1-204ENST00000424609 274 ntBASIC7.72□□□□□ -1.17
ATN1P54259 MTND4LP9-201ENST00000427694 174 ntBASIC7.72□□□□□ -1.17
ATN1P54259 AL513304.1-201ENST00000432987 359 ntTSL 3 BASIC7.72□□□□□ -1.17
ATN1P54259 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC7.72□□□□□ -1.17
ATN1P54259 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC7.72□□□□□ -1.17
ATN1P54259 AC091180.1-201ENST00000462104 372 ntBASIC7.72□□□□□ -1.17
ATN1P54259 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC7.72□□□□□ -1.17
ATN1P54259 RPL21P103-201ENST00000479921 488 ntBASIC7.72□□□□□ -1.17
ATN1P54259 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC7.72□□□□□ -1.17
ATN1P54259 ODF1-202ENST00000518835 368 ntTSL 3 BASIC7.72□□□□□ -1.17
ATN1P54259 AC087752.2-201ENST00000521219 281 ntBASIC7.72□□□□□ -1.17
ATN1P54259 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC7.72□□□□□ -1.17
ATN1P54259 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC7.72□□□□□ -1.17
ATN1P54259 AL133153.1-201ENST00000557756 303 ntBASIC7.72□□□□□ -1.17
ATN1P54259 TGIF1P1-201ENST00000558095 802 ntBASIC7.72□□□□□ -1.17
ATN1P54259 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
ATN1P54259 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC7.72□□□□□ -1.17
ATN1P54259 AL158827.2-201ENST00000602494 330 ntBASIC7.72□□□□□ -1.17
ATN1P54259 AL160281.1-201ENST00000605307 311 ntBASIC7.72□□□□□ -1.17
ATN1P54259 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC7.72□□□□□ -1.17
ATN1P54259 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC7.72□□□□□ -1.17
ATN1P54259 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC7.72□□□□□ -1.17
ATN1P54259 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC7.72□□□□□ -1.17
ATN1P54259 AP001052.1-201ENST00000626421 99 ntBASIC7.72□□□□□ -1.17
ATN1P54259 AL691447.3-201ENST00000635020 330 ntBASIC7.72□□□□□ -1.17
ATN1P54259 PART1-203ENST00000515734 2569 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
ATN1P54259 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
ATN1P54259 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
ATN1P54259 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
ATN1P54259 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC7.72□□□□□ -1.17
ATN1P54259 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC7.72□□□□□ -1.17
ATN1P54259 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC7.72□□□□□ -1.17
ATN1P54259 PRIM2-207ENST00000615550 2308 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
ATN1P54259 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC7.71□□□□□ -1.17
ATN1P54259 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.17
ATN1P54259 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC7.71□□□□□ -1.17
ATN1P54259 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
ATN1P54259 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
ATN1P54259 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC7.71□□□□□ -1.17
ATN1P54259 TMEM138-209ENST00000542946 2839 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
ATN1P54259 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.17
ATN1P54259 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC7.71□□□□□ -1.17
ATN1P54259 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC7.71□□□□□ -1.17
ATN1P54259 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.17
ATN1P54259 PEX19-201ENST00000368072 3661 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
ATN1P54259 EIF4G2-205ENST00000525681 3654 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.17
ATN1P54259 AL445437.1-201ENST00000623157 3087 ntBASIC7.71□□□□□ -1.17
ATN1P54259 HSP90AB7P-201ENST00000450068 2454 ntBASIC7.71□□□□□ -1.17
ATN1P54259 CCDC62-203ENST00000392440 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.17
ATN1P54259 CCDC77-202ENST00000412006 2253 ntAPPRIS ALT2 TSL 2 BASIC7.71□□□□□ -1.17
ATN1P54259 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.17
ATN1P54259 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
ATN1P54259 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC7.71□□□□□ -1.18
ATN1P54259 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
ATN1P54259 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC7.71□□□□□ -1.18
ATN1P54259 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC7.71□□□□□ -1.18
ATN1P54259 RNU4-44P-201ENST00000363050 141 ntBASIC7.71□□□□□ -1.18
ATN1P54259 RNU1-85P-201ENST00000364127 164 ntBASIC7.71□□□□□ -1.18
ATN1P54259 RNU6-429P-201ENST00000384582 108 ntBASIC7.71□□□□□ -1.18
ATN1P54259 Y_RNA.533-201ENST00000384596 114 ntBASIC7.71□□□□□ -1.18
ATN1P54259 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
ATN1P54259 RPS4XP7-201ENST00000406274 780 ntBASIC7.71□□□□□ -1.18
ATN1P54259 AC068138.1-201ENST00000412635 217 ntBASIC7.71□□□□□ -1.18
ATN1P54259 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
ATN1P54259 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC7.71□□□□□ -1.18
ATN1P54259 RN7SL221P-201ENST00000466190 281 ntBASIC7.71□□□□□ -1.18
ATN1P54259 RN7SL413P-201ENST00000482700 297 ntBASIC7.71□□□□□ -1.18
ATN1P54259 AC139272.1-201ENST00000505516 640 ntBASIC7.71□□□□□ -1.18
ATN1P54259 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC7.71□□□□□ -1.18
ATN1P54259 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC7.71□□□□□ -1.18
ATN1P54259 AC108043.1-201ENST00000512696 574 ntBASIC7.71□□□□□ -1.18
ATN1P54259 IGHVIII-47-1-201ENST00000518187 331 ntBASIC7.71□□□□□ -1.18
ATN1P54259 AC104576.1-201ENST00000524225 88 ntBASIC7.71□□□□□ -1.18
ATN1P54259 AC115990.1-201ENST00000526957 301 ntBASIC7.71□□□□□ -1.18
ATN1P54259 AP001922.2-201ENST00000530435 390 ntTSL 3 BASIC7.71□□□□□ -1.18
ATN1P54259 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC7.71□□□□□ -1.18
ATN1P54259 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC7.71□□□□□ -1.18
ATN1P54259 AC007537.1-201ENST00000539347 327 ntBASIC7.71□□□□□ -1.18
ATN1P54259 AC040162.2-201ENST00000573092 157 ntBASIC7.71□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms