Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 MIR6715B-201ENST00000637172 77 ntBASIC3.95□□□□□ -1.78
ACLYP53396 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
ACLYP53396 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.95□□□□□ -1.78
ACLYP53396 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
ACLYP53396 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
ACLYP53396 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
ACLYP53396 RNF6P1-201ENST00000444889 1784 ntBASIC3.94□□□□□ -1.78
ACLYP53396 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
ACLYP53396 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.94□□□□□ -1.78
ACLYP53396 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
ACLYP53396 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
ACLYP53396 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
ACLYP53396 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.94□□□□□ -1.78
ACLYP53396 ZNF603P-201ENST00000405613 487 ntBASIC3.94□□□□□ -1.78
ACLYP53396 RFESDP1-201ENST00000422350 461 ntBASIC3.94□□□□□ -1.78
ACLYP53396 AL160175.1-201ENST00000428124 247 ntBASIC3.94□□□□□ -1.78
ACLYP53396 AC011742.1-201ENST00000431448 434 ntBASIC3.94□□□□□ -1.78
ACLYP53396 AC091862.1-201ENST00000438016 1100 ntBASIC3.94□□□□□ -1.78
ACLYP53396 HMGB1P16-201ENST00000447155 540 ntBASIC3.94□□□□□ -1.78
ACLYP53396 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.94□□□□□ -1.78
ACLYP53396 RPS26P15-201ENST00000488067 348 ntBASIC3.94□□□□□ -1.78
ACLYP53396 AC023050.1-201ENST00000498198 304 ntBASIC3.94□□□□□ -1.78
ACLYP53396 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.94□□□□□ -1.78
ACLYP53396 PHBP14-201ENST00000512887 367 ntBASIC3.94□□□□□ -1.78
ACLYP53396 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.94□□□□□ -1.78
ACLYP53396 AC090136.1-201ENST00000520009 240 ntBASIC3.94□□□□□ -1.78
ACLYP53396 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
ACLYP53396 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.94□□□□□ -1.78
ACLYP53396 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.94□□□□□ -1.78
ACLYP53396 AC024224.1-201ENST00000538284 609 ntBASIC3.94□□□□□ -1.78
ACLYP53396 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC3.94□□□□□ -1.78
ACLYP53396 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC3.94□□□□□ -1.78
ACLYP53396 NF1P5-201ENST00000588287 448 ntBASIC3.94□□□□□ -1.78
ACLYP53396 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.94□□□□□ -1.78
ACLYP53396 AL133247.2-201ENST00000603236 482 ntBASIC3.94□□□□□ -1.78
ACLYP53396 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC3.94□□□□□ -1.78
ACLYP53396 AP003355.3-201ENST00000623465 114 ntBASIC3.94□□□□□ -1.78
ACLYP53396 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.94□□□□□ -1.78
ACLYP53396 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
ACLYP53396 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
ACLYP53396 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
ACLYP53396 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.94□□□□□ -1.78
ACLYP53396 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
ACLYP53396 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
ACLYP53396 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
ACLYP53396 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
ACLYP53396 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
ACLYP53396 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
ACLYP53396 RNU6-317P-201ENST00000384031 107 ntBASIC3.93□□□□□ -1.78
ACLYP53396 RNU6-452P-201ENST00000384406 107 ntBASIC3.93□□□□□ -1.78
ACLYP53396 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
ACLYP53396 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.93□□□□□ -1.78
ACLYP53396 ZNF92P1Y-201ENST00000415010 1191 ntBASIC3.93□□□□□ -1.78
ACLYP53396 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.93□□□□□ -1.78
ACLYP53396 RWDD4P2-201ENST00000426392 563 ntBASIC3.93□□□□□ -1.78
ACLYP53396 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.93□□□□□ -1.78
ACLYP53396 TPTE2P3-201ENST00000441562 1189 ntBASIC3.93□□□□□ -1.78
ACLYP53396 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
ACLYP53396 MTND2P8-201ENST00000450555 1025 ntBASIC3.93□□□□□ -1.78
ACLYP53396 TPMTP4-201ENST00000450749 678 ntBASIC3.93□□□□□ -1.78
ACLYP53396 AC099563.1-201ENST00000456086 418 ntBASIC3.93□□□□□ -1.78
ACLYP53396 AL133477.1-201ENST00000457472 514 ntBASIC3.93□□□□□ -1.78
ACLYP53396 RWDD4P1-201ENST00000488019 565 ntBASIC3.93□□□□□ -1.78
ACLYP53396 SUMO1P1-201ENST00000497904 306 ntBASIC3.93□□□□□ -1.78
ACLYP53396 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.93□□□□□ -1.78
ACLYP53396 AC108157.1-201ENST00000510511 539 ntBASIC3.93□□□□□ -1.78
ACLYP53396 FTH1P9-201ENST00000513251 355 ntBASIC3.93□□□□□ -1.78
ACLYP53396 IGKV2-26-201ENST00000518305 343 ntBASIC3.93□□□□□ -1.78
ACLYP53396 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.93□□□□□ -1.78
ACLYP53396 AC106785.3-201ENST00000564064 847 ntBASIC3.93□□□□□ -1.78
ACLYP53396 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC3.93□□□□□ -1.78
ACLYP53396 AC125494.3-201ENST00000602759 455 ntBASIC3.93□□□□□ -1.78
ACLYP53396 AL606834.2-201ENST00000602954 668 ntBASIC3.93□□□□□ -1.78
ACLYP53396 AL137843.1-201ENST00000605078 385 ntBASIC3.93□□□□□ -1.78
ACLYP53396 AC011816.2-201ENST00000607089 556 ntBASIC3.93□□□□□ -1.78
ACLYP53396 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.93□□□□□ -1.78
ACLYP53396 AL139811.1-201ENST00000424779 2299 ntBASIC3.93□□□□□ -1.78
ACLYP53396 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
ACLYP53396 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
ACLYP53396 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
ACLYP53396 AC018555.1-201ENST00000567548 1980 ntBASIC3.93□□□□□ -1.78
ACLYP53396 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
ACLYP53396 AL353743.4-201ENST00000422653 1547 ntBASIC3.92□□□□□ -1.78
ACLYP53396 RNU4-31P-201ENST00000384211 141 ntBASIC3.92□□□□□ -1.78
ACLYP53396 U3.26-201ENST00000391236 204 ntBASIC3.92□□□□□ -1.78
ACLYP53396 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.92□□□□□ -1.78
ACLYP53396 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.92□□□□□ -1.78
ACLYP53396 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.92□□□□□ -1.78
ACLYP53396 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.92□□□□□ -1.78
ACLYP53396 AC127537.2-201ENST00000439258 465 ntBASIC3.92□□□□□ -1.78
ACLYP53396 MED6P1-201ENST00000439659 713 ntBASIC3.92□□□□□ -1.78
ACLYP53396 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.92□□□□□ -1.78
ACLYP53396 HMGB1P5-202ENST00000451497 985 ntBASIC3.92□□□□□ -1.78
ACLYP53396 RN7SL504P-201ENST00000494496 287 ntBASIC3.92□□□□□ -1.78
ACLYP53396 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.92□□□□□ -1.78
ACLYP53396 AC023141.12-201ENST00000512399 199 ntBASIC3.92□□□□□ -1.78
ACLYP53396 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.92□□□□□ -1.78
ACLYP53396 UBE2NP1-201ENST00000545592 458 ntBASIC3.92□□□□□ -1.78
ACLYP53396 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.92□□□□□ -1.78
ACLYP53396 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms