Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
GTF2A1P52655 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
GTF2A1P52655 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC3.29□□□□□ -1.88
GTF2A1P52655 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
GTF2A1P52655 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
GTF2A1P52655 MIR181B1-201ENST00000385240 110 ntBASIC3.29□□□□□ -1.88
GTF2A1P52655 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
GTF2A1P52655 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
GTF2A1P52655 MUPP-201ENST00000438111 566 ntBASIC3.29□□□□□ -1.88
GTF2A1P52655 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.29□□□□□ -1.88
GTF2A1P52655 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC3.29□□□□□ -1.88
GTF2A1P52655 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC3.29□□□□□ -1.88
GTF2A1P52655 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC3.29□□□□□ -1.88
GTF2A1P52655 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.29□□□□□ -1.88
GTF2A1P52655 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.29□□□□□ -1.88
GTF2A1P52655 AP001025.2-201ENST00000490908 477 ntBASIC3.29□□□□□ -1.88
GTF2A1P52655 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.29□□□□□ -1.88
GTF2A1P52655 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.29□□□□□ -1.88
GTF2A1P52655 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
GTF2A1P52655 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
GTF2A1P52655 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.29□□□□□ -1.88
GTF2A1P52655 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.29□□□□□ -1.88
GTF2A1P52655 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC3.29□□□□□ -1.88
GTF2A1P52655 RLIMP1-201ENST00000339626 1680 ntBASIC3.29□□□□□ -1.88
GTF2A1P52655 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.29□□□□□ -1.88
GTF2A1P52655 AL353743.4-201ENST00000422653 1547 ntBASIC3.29□□□□□ -1.88
GTF2A1P52655 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
GTF2A1P52655 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
GTF2A1P52655 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
GTF2A1P52655 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
GTF2A1P52655 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.28□□□□□ -1.88
GTF2A1P52655 SOD2P1-201ENST00000396543 562 ntBASIC3.28□□□□□ -1.88
GTF2A1P52655 U3.39-201ENST00000408569 239 ntBASIC3.28□□□□□ -1.88
GTF2A1P52655 AC023128.2-201ENST00000420880 1223 ntBASIC3.28□□□□□ -1.88
GTF2A1P52655 AC068287.1-201ENST00000430283 295 ntBASIC3.28□□□□□ -1.88
GTF2A1P52655 XKRYP6-201ENST00000440468 1116 ntBASIC3.28□□□□□ -1.88
GTF2A1P52655 XKRYP3-201ENST00000442113 1116 ntBASIC3.28□□□□□ -1.88
GTF2A1P52655 NUTF2P3-201ENST00000448540 384 ntBASIC3.28□□□□□ -1.88
GTF2A1P52655 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC3.28□□□□□ -1.88
GTF2A1P52655 RPS29P33-201ENST00000456717 146 ntBASIC3.28□□□□□ -1.88
GTF2A1P52655 AL136126.1-201ENST00000473603 402 ntBASIC3.28□□□□□ -1.88
GTF2A1P52655 AP004217.1-201ENST00000480579 346 ntBASIC3.28□□□□□ -1.88
GTF2A1P52655 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.28□□□□□ -1.88
GTF2A1P52655 AC110792.1-201ENST00000491826 472 ntBASIC3.28□□□□□ -1.88
GTF2A1P52655 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
GTF2A1P52655 MTCYBP37-201ENST00000510642 1133 ntBASIC3.28□□□□□ -1.88
GTF2A1P52655 OR5H4P-201ENST00000510851 923 ntBASIC3.28□□□□□ -1.88
GTF2A1P52655 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.28□□□□□ -1.88
GTF2A1P52655 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
GTF2A1P52655 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC3.28□□□□□ -1.88
GTF2A1P52655 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.28□□□□□ -1.88
GTF2A1P52655 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.28□□□□□ -1.88
GTF2A1P52655 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
GTF2A1P52655 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.28□□□□□ -1.88
GTF2A1P52655 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC3.28□□□□□ -1.88
GTF2A1P52655 AC068790.4-201ENST00000602474 263 ntBASIC3.28□□□□□ -1.88
GTF2A1P52655 AC010809.3-201ENST00000621310 641 ntBASIC3.28□□□□□ -1.88
GTF2A1P52655 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.28□□□□□ -1.88
GTF2A1P52655 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.28□□□□□ -1.88
GTF2A1P52655 VTRNA1-1-201ENST00000363120 99 ntBASIC3.27□□□□□ -1.89
GTF2A1P52655 RNA5SP97-201ENST00000365006 84 ntBASIC3.27□□□□□ -1.89
GTF2A1P52655 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
GTF2A1P52655 RNA5SP424-201ENST00000390988 115 ntBASIC3.27□□□□□ -1.89
GTF2A1P52655 HMGN2P35-201ENST00000412164 270 ntBASIC3.27□□□□□ -1.89
GTF2A1P52655 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.27□□□□□ -1.89
GTF2A1P52655 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.27□□□□□ -1.89
GTF2A1P52655 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC3.27□□□□□ -1.89
GTF2A1P52655 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC3.27□□□□□ -1.89
GTF2A1P52655 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.27□□□□□ -1.89
GTF2A1P52655 CACYBPP1-201ENST00000438592 684 ntBASIC3.27□□□□□ -1.89
GTF2A1P52655 MTCYBP21-201ENST00000443300 1113 ntBASIC3.27□□□□□ -1.89
GTF2A1P52655 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.27□□□□□ -1.89
GTF2A1P52655 CYCSP42-201ENST00000450823 238 ntBASIC3.27□□□□□ -1.89
GTF2A1P52655 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.27□□□□□ -1.89
GTF2A1P52655 RPL21P10-201ENST00000463521 490 ntBASIC3.27□□□□□ -1.89
GTF2A1P52655 VN1R17P-201ENST00000472048 1090 ntBASIC3.27□□□□□ -1.89
GTF2A1P52655 ST13P14-201ENST00000474095 734 ntBASIC3.27□□□□□ -1.89
GTF2A1P52655 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC3.27□□□□□ -1.89
GTF2A1P52655 GAPDHP36-201ENST00000480688 918 ntBASIC3.27□□□□□ -1.89
GTF2A1P52655 AC005912.1-201ENST00000495392 255 ntBASIC3.27□□□□□ -1.89
GTF2A1P52655 SNORD59.2-201ENST00000516873 68 ntBASIC3.27□□□□□ -1.89
GTF2A1P52655 AF279873.1-201ENST00000523393 313 ntBASIC3.27□□□□□ -1.89
GTF2A1P52655 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.27□□□□□ -1.89
GTF2A1P52655 AC027281.1-201ENST00000574178 758 ntBASIC3.27□□□□□ -1.89
GTF2A1P52655 MIR3690-201ENST00000580266 75 ntBASIC3.27□□□□□ -1.89
GTF2A1P52655 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.27□□□□□ -1.89
GTF2A1P52655 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.27□□□□□ -1.89
GTF2A1P52655 AC015726.1-201ENST00000602353 681 ntBASIC3.27□□□□□ -1.89
GTF2A1P52655 AC121761.2-201ENST00000617300 689 ntBASIC3.27□□□□□ -1.89
GTF2A1P52655 RNA5SP196-201ENST00000625967 102 ntBASIC3.27□□□□□ -1.89
GTF2A1P52655 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.27□□□□□ -1.89
GTF2A1P52655 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
GTF2A1P52655 CNOT6LP1-201ENST00000559681 1462 ntBASIC3.27□□□□□ -1.89
GTF2A1P52655 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
GTF2A1P52655 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.26□□□□□ -1.89
GTF2A1P52655 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.26□□□□□ -1.89
GTF2A1P52655 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.26□□□□□ -1.89
GTF2A1P52655 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
GTF2A1P52655 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.26□□□□□ -1.89
GTF2A1P52655 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms