Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.32□□□□□ -1.88
LHX2P50458 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.32□□□□□ -1.88
LHX2P50458 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.32□□□□□ -1.88
LHX2P50458 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.32□□□□□ -1.88
LHX2P50458 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.32□□□□□ -1.88
LHX2P50458 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.32□□□□□ -1.88
LHX2P50458 AC093510.2-201ENST00000562820 896 ntBASIC3.32□□□□□ -1.88
LHX2P50458 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC3.32□□□□□ -1.88
LHX2P50458 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.32□□□□□ -1.88
LHX2P50458 MIR548Y-201ENST00000582739 110 ntBASIC3.32□□□□□ -1.88
LHX2P50458 AL163642.2-201ENST00000604722 1019 ntBASIC3.32□□□□□ -1.88
LHX2P50458 MIR92B-201ENST00000607575 96 ntBASIC3.32□□□□□ -1.88
LHX2P50458 AC120053.1-201ENST00000607706 736 ntBASIC3.32□□□□□ -1.88
LHX2P50458 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC3.32□□□□□ -1.88
LHX2P50458 AL136370.1-201ENST00000608166 691 ntBASIC3.32□□□□□ -1.88
LHX2P50458 MIR486-1-201ENST00000612171 68 ntBASIC3.32□□□□□ -1.88
LHX2P50458 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.32□□□□□ -1.88
LHX2P50458 AP000553.6-201ENST00000641242 118 ntBASIC3.32□□□□□ -1.88
LHX2P50458 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
LHX2P50458 MTND4P10-201ENST00000446199 1363 ntBASIC3.32□□□□□ -1.88
LHX2P50458 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LHX2P50458 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.32□□□□□ -1.88
LHX2P50458 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
LHX2P50458 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.32□□□□□ -1.88
LHX2P50458 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LHX2P50458 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.32□□□□□ -1.88
LHX2P50458 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LHX2P50458 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.31□□□□□ -1.88
LHX2P50458 AC106871.1-201ENST00000568324 3102 ntBASIC3.31□□□□□ -1.88
LHX2P50458 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LHX2P50458 AL139811.1-201ENST00000424779 2299 ntBASIC3.31□□□□□ -1.88
LHX2P50458 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.31□□□□□ -1.88
LHX2P50458 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LHX2P50458 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LHX2P50458 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.31□□□□□ -1.88
LHX2P50458 MTCO1P14-201ENST00000441695 1559 ntBASIC3.31□□□□□ -1.88
LHX2P50458 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LHX2P50458 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LHX2P50458 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.31□□□□□ -1.88
LHX2P50458 MIR423-201ENST00000362201 94 ntBASIC3.31□□□□□ -1.88
LHX2P50458 RNU1-87P-201ENST00000363727 170 ntBASIC3.31□□□□□ -1.88
LHX2P50458 RNU6-1005P-201ENST00000384519 107 ntBASIC3.31□□□□□ -1.88
LHX2P50458 RNA5SP171-201ENST00000391071 115 ntBASIC3.31□□□□□ -1.88
LHX2P50458 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.31□□□□□ -1.88
LHX2P50458 AL606495.1-201ENST00000422100 813 ntBASIC3.31□□□□□ -1.88
LHX2P50458 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC3.31□□□□□ -1.88
LHX2P50458 USP12PY-201ENST00000427677 1064 ntBASIC3.31□□□□□ -1.88
LHX2P50458 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.31□□□□□ -1.88
LHX2P50458 AC091286.1-201ENST00000431233 461 ntBASIC3.31□□□□□ -1.88
LHX2P50458 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.31□□□□□ -1.88
LHX2P50458 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.31□□□□□ -1.88
LHX2P50458 YWHAQP9-201ENST00000445891 512 ntBASIC3.31□□□□□ -1.88
LHX2P50458 MOB1AP2-201ENST00000446060 614 ntBASIC3.31□□□□□ -1.88
LHX2P50458 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC3.31□□□□□ -1.88
LHX2P50458 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC3.31□□□□□ -1.88
LHX2P50458 SLC25A15P5-201ENST00000508033 253 ntBASIC3.31□□□□□ -1.88
LHX2P50458 AC104619.4-201ENST00000510773 249 ntBASIC3.31□□□□□ -1.88
LHX2P50458 HMGN1P15-201ENST00000513870 295 ntBASIC3.31□□□□□ -1.88
LHX2P50458 RN7SKP18-201ENST00000516005 275 ntBASIC3.31□□□□□ -1.88
LHX2P50458 NARSP2-201ENST00000518524 679 ntBASIC3.31□□□□□ -1.88
LHX2P50458 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC3.31□□□□□ -1.88
LHX2P50458 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC3.31□□□□□ -1.88
LHX2P50458 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC3.31□□□□□ -1.88
LHX2P50458 AC022884.3-201ENST00000579571 248 ntBASIC3.31□□□□□ -1.88
LHX2P50458 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC3.31□□□□□ -1.88
LHX2P50458 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.31□□□□□ -1.88
LHX2P50458 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.31□□□□□ -1.88
LHX2P50458 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.31□□□□□ -1.88
LHX2P50458 MIR8084-201ENST00000614105 89 ntBASIC3.31□□□□□ -1.88
LHX2P50458 AC091905.1-201ENST00000624400 311 ntBASIC3.31□□□□□ -1.88
LHX2P50458 AC119674.1-207ENST00000641355 633 ntBASIC3.31□□□□□ -1.88
LHX2P50458 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.31□□□□□ -1.88
LHX2P50458 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LHX2P50458 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.3□□□□□ -1.88
LHX2P50458 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LHX2P50458 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LHX2P50458 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.3□□□□□ -1.88
LHX2P50458 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
LHX2P50458 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.3□□□□□ -1.88
LHX2P50458 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.3□□□□□ -1.88
LHX2P50458 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LHX2P50458 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.3□□□□□ -1.88
LHX2P50458 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
LHX2P50458 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
LHX2P50458 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.3□□□□□ -1.88
LHX2P50458 RNU6-304P-201ENST00000364855 107 ntBASIC3.3□□□□□ -1.88
LHX2P50458 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.3□□□□□ -1.88
LHX2P50458 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LHX2P50458 MIR142-201ENST00000384835 87 ntBASIC3.3□□□□□ -1.88
LHX2P50458 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.3□□□□□ -1.88
LHX2P50458 HMGB1P13-201ENST00000406019 642 ntBASIC3.3□□□□□ -1.88
LHX2P50458 Z98941.1-201ENST00000407764 100 ntBASIC3.3□□□□□ -1.88
LHX2P50458 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.3□□□□□ -1.88
LHX2P50458 LINC01347-201ENST00000417964 355 ntBASIC3.3□□□□□ -1.88
LHX2P50458 AC023128.2-201ENST00000420880 1223 ntBASIC3.3□□□□□ -1.88
LHX2P50458 AC069157.1-201ENST00000421749 137 ntBASIC3.3□□□□□ -1.88
LHX2P50458 PNRC2P1-201ENST00000423940 420 ntBASIC3.3□□□□□ -1.88
LHX2P50458 MTCO2P1-201ENST00000424648 477 ntBASIC3.3□□□□□ -1.88
LHX2P50458 AL512637.2-201ENST00000431287 1256 ntBASIC3.3□□□□□ -1.88
LHX2P50458 AC092809.1-201ENST00000441469 474 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms