Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AL645931.1-201ENST00000439737 410 ntBASIC3.97□□□□□ -1.77
BRCC3P46736 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.97□□□□□ -1.77
BRCC3P46736 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.97□□□□□ -1.77
BRCC3P46736 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC3.97□□□□□ -1.77
BRCC3P46736 MOB1AP2-201ENST00000446060 614 ntBASIC3.97□□□□□ -1.77
BRCC3P46736 RPS3AP46-201ENST00000448352 682 ntBASIC3.97□□□□□ -1.77
BRCC3P46736 AC239809.1-201ENST00000450470 217 ntBASIC3.97□□□□□ -1.77
BRCC3P46736 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.97□□□□□ -1.77
BRCC3P46736 RPL32P14-201ENST00000463196 378 ntBASIC3.97□□□□□ -1.77
BRCC3P46736 RPL7P49-201ENST00000471402 708 ntBASIC3.97□□□□□ -1.77
BRCC3P46736 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.97□□□□□ -1.77
BRCC3P46736 OR5H3P-201ENST00000502817 919 ntBASIC3.97□□□□□ -1.77
BRCC3P46736 PRELID3BP7-201ENST00000503606 469 ntBASIC3.97□□□□□ -1.77
BRCC3P46736 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.97□□□□□ -1.77
BRCC3P46736 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.97□□□□□ -1.77
BRCC3P46736 C1GALT1P2-201ENST00000510813 1104 ntBASIC3.97□□□□□ -1.77
BRCC3P46736 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.97□□□□□ -1.77
BRCC3P46736 AC107016.1-201ENST00000550463 337 ntBASIC3.97□□□□□ -1.77
BRCC3P46736 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.97□□□□□ -1.77
BRCC3P46736 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.97□□□□□ -1.77
BRCC3P46736 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.97□□□□□ -1.77
BRCC3P46736 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.97□□□□□ -1.77
BRCC3P46736 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
BRCC3P46736 MRPS35P3-201ENST00000603189 709 ntBASIC3.97□□□□□ -1.77
BRCC3P46736 AC026741.1-201ENST00000605892 482 ntBASIC3.97□□□□□ -1.77
BRCC3P46736 AL391261.4-201ENST00000616012 481 ntBASIC3.97□□□□□ -1.77
BRCC3P46736 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.97□□□□□ -1.77
BRCC3P46736 AC233309.1-201ENST00000619522 751 ntBASIC3.97□□□□□ -1.77
BRCC3P46736 AL359715.5-201ENST00000623431 443 ntBASIC3.97□□□□□ -1.77
BRCC3P46736 AC116563.2-201ENST00000624751 535 ntBASIC3.97□□□□□ -1.77
BRCC3P46736 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.97□□□□□ -1.77
BRCC3P46736 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
BRCC3P46736 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.97□□□□□ -1.77
BRCC3P46736 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.97□□□□□ -1.77
BRCC3P46736 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
BRCC3P46736 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
BRCC3P46736 AC007823.1-201ENST00000569932 1566 ntBASIC3.97□□□□□ -1.77
BRCC3P46736 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
BRCC3P46736 MAPK10-372ENST00000641954 3413 ntBASIC3.96□□□□□ -1.77
BRCC3P46736 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
BRCC3P46736 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
BRCC3P46736 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
BRCC3P46736 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
BRCC3P46736 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
BRCC3P46736 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
BRCC3P46736 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
BRCC3P46736 SNORD46.1-201ENST00000364139 104 ntBASIC3.96□□□□□ -1.78
BRCC3P46736 RNA5SP387-201ENST00000364226 106 ntBASIC3.96□□□□□ -1.78
BRCC3P46736 RNU6-98P-201ENST00000384173 107 ntBASIC3.96□□□□□ -1.78
BRCC3P46736 MIR7-3-201ENST00000384898 110 ntBASIC3.96□□□□□ -1.78
BRCC3P46736 ZNF603P-201ENST00000405613 487 ntBASIC3.96□□□□□ -1.78
BRCC3P46736 RPL31P52-201ENST00000407532 367 ntBASIC3.96□□□□□ -1.78
BRCC3P46736 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
BRCC3P46736 ATP5A1P2-201ENST00000412323 255 ntBASIC3.96□□□□□ -1.78
BRCC3P46736 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.96□□□□□ -1.78
BRCC3P46736 CRYBB2P1-203ENST00000415709 538 ntBASIC3.96□□□□□ -1.78
BRCC3P46736 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
BRCC3P46736 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.96□□□□□ -1.78
BRCC3P46736 PNRC2P1-201ENST00000423940 420 ntBASIC3.96□□□□□ -1.78
BRCC3P46736 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.96□□□□□ -1.78
BRCC3P46736 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.96□□□□□ -1.78
BRCC3P46736 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.96□□□□□ -1.78
BRCC3P46736 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.96□□□□□ -1.78
BRCC3P46736 RPL7P29-201ENST00000437151 728 ntBASIC3.96□□□□□ -1.78
BRCC3P46736 CYCSP43-201ENST00000438233 310 ntBASIC3.96□□□□□ -1.78
BRCC3P46736 AL096829.2-201ENST00000446582 742 ntBASIC3.96□□□□□ -1.78
BRCC3P46736 IFNWP4-201ENST00000453148 294 ntBASIC3.96□□□□□ -1.78
BRCC3P46736 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.96□□□□□ -1.78
BRCC3P46736 TRBV12-2-201ENST00000489763 344 ntBASIC3.96□□□□□ -1.78
BRCC3P46736 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC3.96□□□□□ -1.78
BRCC3P46736 AC016550.1-201ENST00000505348 785 ntBASIC3.96□□□□□ -1.78
BRCC3P46736 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.96□□□□□ -1.78
BRCC3P46736 OR7E13P-201ENST00000526052 910 ntBASIC3.96□□□□□ -1.78
BRCC3P46736 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.96□□□□□ -1.78
BRCC3P46736 CBX3P5-201ENST00000552017 521 ntBASIC3.96□□□□□ -1.78
BRCC3P46736 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.96□□□□□ -1.78
BRCC3P46736 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.96□□□□□ -1.78
BRCC3P46736 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.96□□□□□ -1.78
BRCC3P46736 AC093510.2-201ENST00000562820 896 ntBASIC3.96□□□□□ -1.78
BRCC3P46736 DNAJC19P3-201ENST00000594491 331 ntBASIC3.96□□□□□ -1.78
BRCC3P46736 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.96□□□□□ -1.78
BRCC3P46736 AP003072.4-201ENST00000624580 310 ntBASIC3.96□□□□□ -1.78
BRCC3P46736 CR392039.4-201ENST00000624968 501 ntBASIC3.96□□□□□ -1.78
BRCC3P46736 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.96□□□□□ -1.78
BRCC3P46736 AL592437.2-201ENST00000421655 2434 ntBASIC3.96□□□□□ -1.78
BRCC3P46736 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.96□□□□□ -1.78
BRCC3P46736 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
BRCC3P46736 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
BRCC3P46736 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
BRCC3P46736 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
BRCC3P46736 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.95□□□□□ -1.78
BRCC3P46736 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
BRCC3P46736 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.95□□□□□ -1.78
BRCC3P46736 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
BRCC3P46736 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
BRCC3P46736 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
BRCC3P46736 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
BRCC3P46736 AC007685.1-201ENST00000329806 452 ntBASIC3.95□□□□□ -1.78
BRCC3P46736 MIR16-2-201ENST00000362117 81 ntBASIC3.95□□□□□ -1.78
BRCC3P46736 RNA5SP424-201ENST00000390988 115 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms