Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
SLC1A1P43005 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
SLC1A1P43005 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SLC1A1P43005 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
SLC1A1P43005 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.68□□□□□ -1.82
SLC1A1P43005 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
SLC1A1P43005 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
SLC1A1P43005 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SLC1A1P43005 RNA5SP51-201ENST00000364750 119 ntBASIC3.68□□□□□ -1.82
SLC1A1P43005 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.68□□□□□ -1.82
SLC1A1P43005 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.68□□□□□ -1.82
SLC1A1P43005 TXNP1-201ENST00000441872 371 ntBASIC3.68□□□□□ -1.82
SLC1A1P43005 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.68□□□□□ -1.82
SLC1A1P43005 AC006539.3-201ENST00000454258 129 ntBASIC3.68□□□□□ -1.82
SLC1A1P43005 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.68□□□□□ -1.82
SLC1A1P43005 SNORD105B-201ENST00000458770 79 ntBASIC3.68□□□□□ -1.82
SLC1A1P43005 AC018635.1-201ENST00000468292 1030 ntBASIC3.68□□□□□ -1.82
SLC1A1P43005 AC087312.1-201ENST00000471411 480 ntBASIC3.68□□□□□ -1.82
SLC1A1P43005 AC078785.3-201ENST00000476607 425 ntBASIC3.68□□□□□ -1.82
SLC1A1P43005 AC021205.2-201ENST00000480069 347 ntBASIC3.68□□□□□ -1.82
SLC1A1P43005 HMGN1P11-201ENST00000508668 303 ntBASIC3.68□□□□□ -1.82
SLC1A1P43005 NPM1P41-201ENST00000512920 831 ntBASIC3.68□□□□□ -1.82
SLC1A1P43005 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.68□□□□□ -1.82
SLC1A1P43005 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.68□□□□□ -1.82
SLC1A1P43005 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.68□□□□□ -1.82
SLC1A1P43005 AC020914.6-201ENST00000594327 272 ntBASIC3.68□□□□□ -1.82
SLC1A1P43005 SUMO2P14-201ENST00000604488 293 ntBASIC3.68□□□□□ -1.82
SLC1A1P43005 AC010680.4-201ENST00000605334 543 ntBASIC3.68□□□□□ -1.82
SLC1A1P43005 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.68□□□□□ -1.82
SLC1A1P43005 AC112200.1-201ENST00000625015 234 ntBASIC3.68□□□□□ -1.82
SLC1A1P43005 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SLC1A1P43005 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.68□□□□□ -1.82
SLC1A1P43005 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
SLC1A1P43005 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
SLC1A1P43005 ZNF826P-207ENST00000622273 1910 ntBASIC3.68□□□□□ -1.82
SLC1A1P43005 MTND4P31-201ENST00000425607 1343 ntBASIC3.68□□□□□ -1.82
SLC1A1P43005 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SLC1A1P43005 MIR30E-201ENST00000362104 92 ntBASIC3.67□□□□□ -1.82
SLC1A1P43005 SNORD9-201ENST00000362566 104 ntBASIC3.67□□□□□ -1.82
SLC1A1P43005 U8.11-201ENST00000384699 133 ntBASIC3.67□□□□□ -1.82
SLC1A1P43005 U8.12-201ENST00000384701 133 ntBASIC3.67□□□□□ -1.82
SLC1A1P43005 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC3.67□□□□□ -1.82
SLC1A1P43005 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.67□□□□□ -1.82
SLC1A1P43005 RPL7P2-201ENST00000427639 268 ntBASIC3.67□□□□□ -1.82
SLC1A1P43005 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.67□□□□□ -1.82
SLC1A1P43005 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.67□□□□□ -1.82
SLC1A1P43005 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SLC1A1P43005 NUTF2P7-201ENST00000453086 375 ntBASIC3.67□□□□□ -1.82
SLC1A1P43005 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC3.67□□□□□ -1.82
SLC1A1P43005 RPS4XP2-201ENST00000458402 793 ntBASIC3.67□□□□□ -1.82
SLC1A1P43005 U8.18-201ENST00000459285 133 ntBASIC3.67□□□□□ -1.82
SLC1A1P43005 AC010401.1-201ENST00000463867 348 ntBASIC3.67□□□□□ -1.82
SLC1A1P43005 RPL23AP67-201ENST00000465341 474 ntBASIC3.67□□□□□ -1.82
SLC1A1P43005 AC104687.1-201ENST00000485829 412 ntBASIC3.67□□□□□ -1.82
SLC1A1P43005 HMGB1P21-201ENST00000502313 581 ntBASIC3.67□□□□□ -1.82
SLC1A1P43005 MTND5P21-201ENST00000531961 522 ntBASIC3.67□□□□□ -1.82
SLC1A1P43005 AC011602.1-201ENST00000546484 331 ntBASIC3.67□□□□□ -1.82
SLC1A1P43005 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.67□□□□□ -1.82
SLC1A1P43005 AP001180.3-201ENST00000582221 145 ntBASIC3.67□□□□□ -1.82
SLC1A1P43005 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.67□□□□□ -1.82
SLC1A1P43005 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.67□□□□□ -1.82
SLC1A1P43005 AL391497.1-201ENST00000608671 547 ntBASIC3.67□□□□□ -1.82
SLC1A1P43005 AL450489.1-201ENST00000612071 468 ntBASIC3.67□□□□□ -1.82
SLC1A1P43005 AC099669.2-201ENST00000616549 437 ntBASIC3.67□□□□□ -1.82
SLC1A1P43005 AL357559.1-201ENST00000622228 274 ntBASIC3.67□□□□□ -1.82
SLC1A1P43005 AC004943.3-201ENST00000624116 600 ntBASIC3.67□□□□□ -1.82
SLC1A1P43005 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.67□□□□□ -1.82
SLC1A1P43005 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SLC1A1P43005 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
SLC1A1P43005 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SLC1A1P43005 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.67□□□□□ -1.82
SLC1A1P43005 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
SLC1A1P43005 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
SLC1A1P43005 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
SLC1A1P43005 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
SLC1A1P43005 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SLC1A1P43005 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SLC1A1P43005 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
SLC1A1P43005 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
SLC1A1P43005 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
SLC1A1P43005 FRG1CP-201ENST00000358464 769 ntBASIC3.66□□□□□ -1.82
SLC1A1P43005 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.66□□□□□ -1.82
SLC1A1P43005 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
SLC1A1P43005 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.66□□□□□ -1.82
SLC1A1P43005 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SLC1A1P43005 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.66□□□□□ -1.82
SLC1A1P43005 AC234782.4-201ENST00000417646 1048 ntBASIC3.66□□□□□ -1.82
SLC1A1P43005 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.66□□□□□ -1.82
SLC1A1P43005 MTCO3P4-201ENST00000419236 787 ntBASIC3.66□□□□□ -1.82
SLC1A1P43005 AC114878.1-201ENST00000441166 358 ntBASIC3.66□□□□□ -1.82
SLC1A1P43005 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.66□□□□□ -1.82
SLC1A1P43005 RPL37P3-201ENST00000456825 293 ntBASIC3.66□□□□□ -1.82
SLC1A1P43005 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.66□□□□□ -1.82
SLC1A1P43005 AL161747.1-201ENST00000480068 358 ntBASIC3.66□□□□□ -1.82
SLC1A1P43005 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.66□□□□□ -1.82
SLC1A1P43005 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SLC1A1P43005 SSR3-208ENST00000496050 579 ntTSL 4 BASIC3.66□□□□□ -1.82
SLC1A1P43005 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.66□□□□□ -1.82
SLC1A1P43005 MED28P5-201ENST00000528254 438 ntBASIC3.66□□□□□ -1.82
SLC1A1P43005 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms