Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
BRCA1P38398 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
BRCA1P38398 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
BRCA1P38398 AL356489.2-201ENST00000566968 3528 ntBASIC4.01□□□□□ -1.77
BRCA1P38398 AC116096.1-201ENST00000566804 2314 ntBASIC4.01□□□□□ -1.77
BRCA1P38398 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
BRCA1P38398 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.01□□□□□ -1.77
BRCA1P38398 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.01□□□□□ -1.77
BRCA1P38398 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
BRCA1P38398 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.01□□□□□ -1.77
BRCA1P38398 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC4.01□□□□□ -1.77
BRCA1P38398 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.01□□□□□ -1.77
BRCA1P38398 AL135938.1-201ENST00000443141 297 ntBASIC4.01□□□□□ -1.77
BRCA1P38398 YWHAQP9-201ENST00000445891 512 ntBASIC4.01□□□□□ -1.77
BRCA1P38398 HMGB1P5-202ENST00000451497 985 ntBASIC4.01□□□□□ -1.77
BRCA1P38398 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.01□□□□□ -1.77
BRCA1P38398 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC4.01□□□□□ -1.77
BRCA1P38398 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC4.01□□□□□ -1.77
BRCA1P38398 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.01□□□□□ -1.77
BRCA1P38398 DUXAP6-201ENST00000553858 601 ntBASIC4.01□□□□□ -1.77
BRCA1P38398 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.01□□□□□ -1.77
BRCA1P38398 UBL5P2-201ENST00000583788 219 ntBASIC4.01□□□□□ -1.77
BRCA1P38398 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
BRCA1P38398 AC067852.4-201ENST00000590314 478 ntBASIC4.01□□□□□ -1.77
BRCA1P38398 NRBF2P5-201ENST00000603087 788 ntBASIC4.01□□□□□ -1.77
BRCA1P38398 RDM1-219ENST00000615378 542 ntTSL 3 BASIC4.01□□□□□ -1.77
BRCA1P38398 AL450472.3-201ENST00000615578 367 ntBASIC4.01□□□□□ -1.77
BRCA1P38398 AL136360.1-201ENST00000503377 1900 ntBASIC4□□□□□ -1.77
BRCA1P38398 MTCO1P22-201ENST00000604619 1360 ntBASIC4□□□□□ -1.77
BRCA1P38398 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC4□□□□□ -1.77
BRCA1P38398 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4□□□□□ -1.77
BRCA1P38398 OFD1P6Y-202ENST00000451061 2724 ntBASIC4□□□□□ -1.77
BRCA1P38398 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
BRCA1P38398 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4□□□□□ -1.77
BRCA1P38398 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
BRCA1P38398 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
BRCA1P38398 AC006504.1-201ENST00000562493 3666 ntBASIC4□□□□□ -1.77
BRCA1P38398 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
BRCA1P38398 OR5J1P-201ENST00000313544 939 ntBASIC4□□□□□ -1.77
BRCA1P38398 RNU4-82P-201ENST00000362443 140 ntBASIC4□□□□□ -1.77
BRCA1P38398 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
BRCA1P38398 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4□□□□□ -1.77
BRCA1P38398 AF228730.2-201ENST00000438784 848 ntBASIC4□□□□□ -1.77
BRCA1P38398 RPS24P13-201ENST00000442520 397 ntBASIC4□□□□□ -1.77
BRCA1P38398 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4□□□□□ -1.77
BRCA1P38398 AL133477.1-201ENST00000457472 514 ntBASIC4□□□□□ -1.77
BRCA1P38398 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4□□□□□ -1.77
BRCA1P38398 AL360157.1-201ENST00000565962 87 ntBASIC4□□□□□ -1.77
BRCA1P38398 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC4□□□□□ -1.77
BRCA1P38398 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC4□□□□□ -1.77
BRCA1P38398 VN1R90P-201ENST00000595717 726 ntBASIC4□□□□□ -1.77
BRCA1P38398 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC4□□□□□ -1.77
BRCA1P38398 AC007620.3-201ENST00000608131 497 ntBASIC4□□□□□ -1.77
BRCA1P38398 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4□□□□□ -1.77
BRCA1P38398 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
BRCA1P38398 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
BRCA1P38398 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
BRCA1P38398 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.99□□□□□ -1.77
BRCA1P38398 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.99□□□□□ -1.77
BRCA1P38398 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.99□□□□□ -1.77
BRCA1P38398 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
BRCA1P38398 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.99□□□□□ -1.77
BRCA1P38398 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC3.99□□□□□ -1.77
BRCA1P38398 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC3.99□□□□□ -1.77
BRCA1P38398 AL109933.2-201ENST00000452651 260 ntBASIC3.99□□□□□ -1.77
BRCA1P38398 Y_RNA.638-201ENST00000459374 113 ntBASIC3.99□□□□□ -1.77
BRCA1P38398 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC3.99□□□□□ -1.77
BRCA1P38398 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
BRCA1P38398 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.99□□□□□ -1.77
BRCA1P38398 RPS27AP18-201ENST00000515536 459 ntBASIC3.99□□□□□ -1.77
BRCA1P38398 OR10D4P-201ENST00000525892 951 ntBASIC3.99□□□□□ -1.77
BRCA1P38398 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC3.99□□□□□ -1.77
BRCA1P38398 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.99□□□□□ -1.77
BRCA1P38398 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC3.99□□□□□ -1.77
BRCA1P38398 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC3.99□□□□□ -1.77
BRCA1P38398 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.99□□□□□ -1.77
BRCA1P38398 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.99□□□□□ -1.77
BRCA1P38398 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.98□□□□□ -1.77
BRCA1P38398 RNU4-7P-201ENST00000364758 141 ntBASIC3.98□□□□□ -1.77
BRCA1P38398 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.98□□□□□ -1.77
BRCA1P38398 BMS1P22-201ENST00000414726 313 ntBASIC3.98□□□□□ -1.77
BRCA1P38398 MTCYBP14-201ENST00000457471 715 ntBASIC3.98□□□□□ -1.77
BRCA1P38398 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC3.98□□□□□ -1.77
BRCA1P38398 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC3.98□□□□□ -1.77
BRCA1P38398 IGHV3-63-201ENST00000518422 341 ntBASIC3.98□□□□□ -1.77
BRCA1P38398 OR5AP1P-201ENST00000529730 940 ntBASIC3.98□□□□□ -1.77
BRCA1P38398 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.98□□□□□ -1.77
BRCA1P38398 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
BRCA1P38398 MIR4769-201ENST00000584126 77 ntBASIC3.98□□□□□ -1.77
BRCA1P38398 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.98□□□□□ -1.77
BRCA1P38398 AL162713.1-201ENST00000604480 262 ntBASIC3.98□□□□□ -1.77
BRCA1P38398 AL590410.1-201ENST00000617925 333 ntBASIC3.98□□□□□ -1.77
BRCA1P38398 AC068722.2-201ENST00000618734 544 ntBASIC3.98□□□□□ -1.77
BRCA1P38398 AL359715.5-201ENST00000623431 443 ntBASIC3.98□□□□□ -1.77
BRCA1P38398 AP002967.1-201ENST00000624203 539 ntBASIC3.98□□□□□ -1.77
BRCA1P38398 AL137790.1-201ENST00000634283 177 ntBASIC3.98□□□□□ -1.77
BRCA1P38398 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.98□□□□□ -1.77
BRCA1P38398 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
BRCA1P38398 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
BRCA1P38398 MIR448-201ENST00000362131 111 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms