Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 TVP23BP1-201ENST00000557500 617 ntBASIC4.27□□□□□ -1.73
CTNNA1P35221 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.27□□□□□ -1.73
CTNNA1P35221 MTND4LP25-201ENST00000570218 163 ntBASIC4.27□□□□□ -1.73
CTNNA1P35221 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC4.27□□□□□ -1.73
CTNNA1P35221 MIR5684-201ENST00000585074 65 ntBASIC4.27□□□□□ -1.73
CTNNA1P35221 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC4.27□□□□□ -1.73
CTNNA1P35221 AL669831.4-202ENST00000590817 238 ntBASIC4.27□□□□□ -1.73
CTNNA1P35221 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.27□□□□□ -1.73
CTNNA1P35221 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.27□□□□□ -1.73
CTNNA1P35221 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC4.27□□□□□ -1.73
CTNNA1P35221 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.27□□□□□ -1.73
CTNNA1P35221 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.27□□□□□ -1.73
CTNNA1P35221 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CTNNA1P35221 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CTNNA1P35221 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CTNNA1P35221 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CTNNA1P35221 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CTNNA1P35221 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
CTNNA1P35221 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.26□□□□□ -1.73
CTNNA1P35221 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CTNNA1P35221 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CTNNA1P35221 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CTNNA1P35221 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CTNNA1P35221 RNU6-207P-201ENST00000384137 107 ntBASIC4.26□□□□□ -1.73
CTNNA1P35221 RNU6-339P-201ENST00000384310 107 ntBASIC4.26□□□□□ -1.73
CTNNA1P35221 MIR192-201ENST00000384915 110 ntBASIC4.26□□□□□ -1.73
CTNNA1P35221 CYB5AP4-201ENST00000396692 399 ntBASIC4.26□□□□□ -1.73
CTNNA1P35221 AL161909.1-201ENST00000397390 712 ntBASIC4.26□□□□□ -1.73
CTNNA1P35221 RNA5SP56-201ENST00000410277 118 ntBASIC4.26□□□□□ -1.73
CTNNA1P35221 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CTNNA1P35221 TOMM22P1-201ENST00000418578 312 ntBASIC4.26□□□□□ -1.73
CTNNA1P35221 CHIAP3-201ENST00000423668 1133 ntBASIC4.26□□□□□ -1.73
CTNNA1P35221 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.26□□□□□ -1.73
CTNNA1P35221 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.26□□□□□ -1.73
CTNNA1P35221 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.26□□□□□ -1.73
CTNNA1P35221 ATP5HP2-201ENST00000433885 485 ntBASIC4.26□□□□□ -1.73
CTNNA1P35221 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
CTNNA1P35221 AC096638.2-201ENST00000434965 711 ntBASIC4.26□□□□□ -1.73
CTNNA1P35221 AL356276.2-201ENST00000435919 558 ntBASIC4.26□□□□□ -1.73
CTNNA1P35221 AL592437.1-201ENST00000443781 492 ntBASIC4.26□□□□□ -1.73
CTNNA1P35221 EXTL2P1-201ENST00000446218 416 ntBASIC4.26□□□□□ -1.73
CTNNA1P35221 RPS17P11-201ENST00000474297 293 ntBASIC4.26□□□□□ -1.73
CTNNA1P35221 AC041039.1-201ENST00000485656 536 ntBASIC4.26□□□□□ -1.73
CTNNA1P35221 AC013356.1-201ENST00000489027 564 ntBASIC4.26□□□□□ -1.73
CTNNA1P35221 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC4.26□□□□□ -1.73
CTNNA1P35221 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.26□□□□□ -1.73
CTNNA1P35221 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.26□□□□□ -1.73
CTNNA1P35221 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.26□□□□□ -1.73
CTNNA1P35221 AC048346.1-201ENST00000510247 144 ntBASIC4.26□□□□□ -1.73
CTNNA1P35221 AC109471.1-201ENST00000511631 612 ntBASIC4.26□□□□□ -1.73
CTNNA1P35221 RNU5A-7P-201ENST00000515979 116 ntBASIC4.26□□□□□ -1.73
CTNNA1P35221 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC4.26□□□□□ -1.73
CTNNA1P35221 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.26□□□□□ -1.73
CTNNA1P35221 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC4.26□□□□□ -1.73
CTNNA1P35221 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.26□□□□□ -1.73
CTNNA1P35221 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.26□□□□□ -1.73
CTNNA1P35221 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.26□□□□□ -1.73
CTNNA1P35221 MRPS35P3-201ENST00000603189 709 ntBASIC4.26□□□□□ -1.73
CTNNA1P35221 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC4.26□□□□□ -1.73
CTNNA1P35221 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.26□□□□□ -1.73
CTNNA1P35221 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.26□□□□□ -1.73
CTNNA1P35221 AF127577.6-201ENST00000623352 2191 ntBASIC4.26□□□□□ -1.73
CTNNA1P35221 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.26□□□□□ -1.73
CTNNA1P35221 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CTNNA1P35221 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CTNNA1P35221 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.25□□□□□ -1.73
CTNNA1P35221 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CTNNA1P35221 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CTNNA1P35221 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
CTNNA1P35221 AL139098.1-201ENST00000407291 389 ntBASIC4.25□□□□□ -1.73
CTNNA1P35221 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC4.25□□□□□ -1.73
CTNNA1P35221 RNU4-25P-201ENST00000410569 230 ntBASIC4.25□□□□□ -1.73
CTNNA1P35221 AC011933.1-201ENST00000413334 321 ntBASIC4.25□□□□□ -1.73
CTNNA1P35221 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC4.25□□□□□ -1.73
CTNNA1P35221 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC4.25□□□□□ -1.73
CTNNA1P35221 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.25□□□□□ -1.73
CTNNA1P35221 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.25□□□□□ -1.73
CTNNA1P35221 COX6B1P7-201ENST00000430845 235 ntBASIC4.25□□□□□ -1.73
CTNNA1P35221 AC000041.1-201ENST00000439655 175 ntBASIC4.25□□□□□ -1.73
CTNNA1P35221 AC239367.2-201ENST00000447309 705 ntBASIC4.25□□□□□ -1.73
CTNNA1P35221 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CTNNA1P35221 AC104073.1-201ENST00000451988 151 ntBASIC4.25□□□□□ -1.73
CTNNA1P35221 NDUFA5P7-201ENST00000452914 242 ntBASIC4.25□□□□□ -1.73
CTNNA1P35221 ANP32BP2-201ENST00000454525 545 ntBASIC4.25□□□□□ -1.73
CTNNA1P35221 AC116533.1-201ENST00000459748 321 ntBASIC4.25□□□□□ -1.73
CTNNA1P35221 RPL7P1-201ENST00000468161 747 ntBASIC4.25□□□□□ -1.73
CTNNA1P35221 RPL7P9-201ENST00000468715 747 ntBASIC4.25□□□□□ -1.73
CTNNA1P35221 SNRPGP3-201ENST00000469405 227 ntBASIC4.25□□□□□ -1.73
CTNNA1P35221 RN7SL481P-201ENST00000477764 299 ntBASIC4.25□□□□□ -1.73
CTNNA1P35221 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.25□□□□□ -1.73
CTNNA1P35221 AC106872.2-201ENST00000494303 480 ntBASIC4.25□□□□□ -1.73
CTNNA1P35221 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.25□□□□□ -1.73
CTNNA1P35221 OR5H5P-201ENST00000503164 928 ntBASIC4.25□□□□□ -1.73
CTNNA1P35221 MTCO3P44-201ENST00000510977 541 ntBASIC4.25□□□□□ -1.73
CTNNA1P35221 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC4.25□□□□□ -1.73
CTNNA1P35221 SNORA70.14-201ENST00000516205 110 ntBASIC4.25□□□□□ -1.73
CTNNA1P35221 RN7SKP244-201ENST00000516513 307 ntBASIC4.25□□□□□ -1.73
CTNNA1P35221 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.25□□□□□ -1.73
CTNNA1P35221 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC4.25□□□□□ -1.73
CTNNA1P35221 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms