Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.42□□□□□ -1.7
HOXC13P31276 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
HOXC13P31276 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.41□□□□□ -1.7
HOXC13P31276 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
HOXC13P31276 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.41□□□□□ -1.7
HOXC13P31276 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
HOXC13P31276 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.41□□□□□ -1.7
HOXC13P31276 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HOXC13P31276 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.41□□□□□ -1.7
HOXC13P31276 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.41□□□□□ -1.7
HOXC13P31276 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.41□□□□□ -1.7
HOXC13P31276 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HOXC13P31276 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
HOXC13P31276 RNU1-14P-201ENST00000362759 152 ntBASIC4.41□□□□□ -1.7
HOXC13P31276 SNORA7.2-201ENST00000364446 145 ntBASIC4.41□□□□□ -1.7
HOXC13P31276 SNORA51.2-201ENST00000364595 132 ntBASIC4.41□□□□□ -1.7
HOXC13P31276 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.41□□□□□ -1.7
HOXC13P31276 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.41□□□□□ -1.7
HOXC13P31276 RPL21P65-201ENST00000406094 466 ntBASIC4.41□□□□□ -1.7
HOXC13P31276 RNA5SP44-201ENST00000410446 133 ntBASIC4.41□□□□□ -1.7
HOXC13P31276 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.41□□□□□ -1.7
HOXC13P31276 OR2X1P-201ENST00000421144 687 ntBASIC4.41□□□□□ -1.7
HOXC13P31276 RBMY1KP-201ENST00000423480 476 ntBASIC4.41□□□□□ -1.7
HOXC13P31276 AC093698.1-201ENST00000423843 571 ntBASIC4.41□□□□□ -1.7
HOXC13P31276 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC4.41□□□□□ -1.7
HOXC13P31276 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HOXC13P31276 AC073335.1-201ENST00000427776 363 ntBASIC4.41□□□□□ -1.7
HOXC13P31276 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.41□□□□□ -1.7
HOXC13P31276 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC4.41□□□□□ -1.7
HOXC13P31276 AL645638.1-201ENST00000440519 361 ntBASIC4.41□□□□□ -1.7
HOXC13P31276 AL929288.2-201ENST00000446368 407 ntBASIC4.41□□□□□ -1.7
HOXC13P31276 AC010307.1-201ENST00000467206 836 ntBASIC4.41□□□□□ -1.7
HOXC13P31276 RPL23AP2-201ENST00000471227 466 ntBASIC4.41□□□□□ -1.7
HOXC13P31276 AC146944.2-203ENST00000502493 354 ntBASIC4.41□□□□□ -1.7
HOXC13P31276 RNF138P1-201ENST00000502765 546 ntBASIC4.41□□□□□ -1.7
HOXC13P31276 BNIP3P41-201ENST00000503774 571 ntBASIC4.41□□□□□ -1.7
HOXC13P31276 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.41□□□□□ -1.7
HOXC13P31276 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.41□□□□□ -1.7
HOXC13P31276 AC139495.1-202ENST00000513164 354 ntBASIC4.41□□□□□ -1.7
HOXC13P31276 AP003355.1-201ENST00000518956 587 ntBASIC4.41□□□□□ -1.7
HOXC13P31276 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC4.41□□□□□ -1.7
HOXC13P31276 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC4.41□□□□□ -1.7
HOXC13P31276 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.41□□□□□ -1.7
HOXC13P31276 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.41□□□□□ -1.7
HOXC13P31276 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.41□□□□□ -1.7
HOXC13P31276 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.41□□□□□ -1.7
HOXC13P31276 MIR4789-201ENST00000577469 82 ntBASIC4.41□□□□□ -1.7
HOXC13P31276 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.41□□□□□ -1.7
HOXC13P31276 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.41□□□□□ -1.7
HOXC13P31276 IGHV3-29-201ENST00000604817 344 ntBASIC4.41□□□□□ -1.7
HOXC13P31276 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.41□□□□□ -1.7
HOXC13P31276 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.41□□□□□ -1.7
HOXC13P31276 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HOXC13P31276 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
HOXC13P31276 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.41□□□□□ -1.7
HOXC13P31276 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HOXC13P31276 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
HOXC13P31276 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
HOXC13P31276 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
HOXC13P31276 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
HOXC13P31276 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
HOXC13P31276 AC016716.1-201ENST00000265882 708 ntBASIC4.4□□□□□ -1.71
HOXC13P31276 RNU1-15P-201ENST00000353977 144 ntBASIC4.4□□□□□ -1.71
HOXC13P31276 RNU6-1243P-201ENST00000364028 107 ntBASIC4.4□□□□□ -1.71
HOXC13P31276 Y_RNA.333-201ENST00000365274 102 ntBASIC4.4□□□□□ -1.71
HOXC13P31276 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
HOXC13P31276 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
HOXC13P31276 RNU6-468P-201ENST00000384003 109 ntBASIC4.4□□□□□ -1.71
HOXC13P31276 RNU6-932P-201ENST00000391108 106 ntBASIC4.4□□□□□ -1.71
HOXC13P31276 AL121972.1-201ENST00000402023 252 ntBASIC4.4□□□□□ -1.71
HOXC13P31276 RNU6-77P-201ENST00000410554 91 ntBASIC4.4□□□□□ -1.71
HOXC13P31276 RN7SKP235-201ENST00000410662 305 ntBASIC4.4□□□□□ -1.71
HOXC13P31276 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.4□□□□□ -1.71
HOXC13P31276 AC093578.1-201ENST00000415219 368 ntBASIC4.4□□□□□ -1.71
HOXC13P31276 RPL7P2-201ENST00000427639 268 ntBASIC4.4□□□□□ -1.71
HOXC13P31276 PRELID3BP10-201ENST00000431957 584 ntBASIC4.4□□□□□ -1.71
HOXC13P31276 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC4.4□□□□□ -1.71
HOXC13P31276 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.4□□□□□ -1.71
HOXC13P31276 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.4□□□□□ -1.71
HOXC13P31276 OFD1P3Y-201ENST00000453312 783 ntBASIC4.4□□□□□ -1.71
HOXC13P31276 CEACAMP4-201ENST00000457676 421 ntBASIC4.4□□□□□ -1.71
HOXC13P31276 RPL21P104-201ENST00000464143 478 ntBASIC4.4□□□□□ -1.71
HOXC13P31276 RPL31P13-201ENST00000484151 370 ntBASIC4.4□□□□□ -1.71
HOXC13P31276 VN1R105P-201ENST00000486595 910 ntBASIC4.4□□□□□ -1.71
HOXC13P31276 AC108729.1-201ENST00000487812 947 ntBASIC4.4□□□□□ -1.71
HOXC13P31276 RPS6P4-201ENST00000494693 758 ntBASIC4.4□□□□□ -1.71
HOXC13P31276 RPS27AP13-201ENST00000498403 237 ntBASIC4.4□□□□□ -1.71
HOXC13P31276 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.4□□□□□ -1.71
HOXC13P31276 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.4□□□□□ -1.71
HOXC13P31276 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HOXC13P31276 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.4□□□□□ -1.71
HOXC13P31276 OR5D17P-201ENST00000531492 978 ntBASIC4.4□□□□□ -1.71
HOXC13P31276 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC4.4□□□□□ -1.71
HOXC13P31276 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.4□□□□□ -1.71
HOXC13P31276 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC4.4□□□□□ -1.71
HOXC13P31276 AC006116.5-201ENST00000591936 559 ntBASIC4.4□□□□□ -1.71
HOXC13P31276 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.4□□□□□ -1.71
HOXC13P31276 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.4□□□□□ -1.71
HOXC13P31276 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.4□□□□□ -1.71
HOXC13P31276 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms