Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC6.56□□□□□ -1.36
RFX1P22670 AC036111.2-201ENST00000533247 901 ntBASIC6.56□□□□□ -1.36
RFX1P22670 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC6.56□□□□□ -1.36
RFX1P22670 AC068831.4-201ENST00000556118 109 ntBASIC6.56□□□□□ -1.36
RFX1P22670 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC6.56□□□□□ -1.36
RFX1P22670 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.56□□□□□ -1.36
RFX1P22670 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC6.56□□□□□ -1.36
RFX1P22670 AL050343.2-201ENST00000607338 280 ntBASIC6.56□□□□□ -1.36
RFX1P22670 AL354950.2-201ENST00000617939 290 ntBASIC6.56□□□□□ -1.36
RFX1P22670 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC6.56□□□□□ -1.36
RFX1P22670 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC6.56□□□□□ -1.36
RFX1P22670 AC100810.6-201ENST00000638068 285 ntBASIC6.56□□□□□ -1.36
RFX1P22670 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
RFX1P22670 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.56□□□□□ -1.36
RFX1P22670 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
RFX1P22670 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.56□□□□□ -1.36
RFX1P22670 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC6.56□□□□□ -1.36
RFX1P22670 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC6.56□□□□□ -1.36
RFX1P22670 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
RFX1P22670 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
RFX1P22670 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
RFX1P22670 AL451142.2-201ENST00000429076 2090 ntBASIC6.56□□□□□ -1.36
RFX1P22670 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC6.56□□□□□ -1.36
RFX1P22670 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.56□□□□□ -1.36
RFX1P22670 LARS-201ENST00000274562 2213 ntTSL 2 BASIC6.56□□□□□ -1.36
RFX1P22670 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.56□□□□□ -1.36
RFX1P22670 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RFX1P22670 THAP12P9-201ENST00000503971 2360 ntBASIC6.55□□□□□ -1.36
RFX1P22670 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
RFX1P22670 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.55□□□□□ -1.36
RFX1P22670 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RFX1P22670 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
RFX1P22670 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
RFX1P22670 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RFX1P22670 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
RFX1P22670 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RFX1P22670 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
RFX1P22670 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.55□□□□□ -1.36
RFX1P22670 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
RFX1P22670 RNU5A-8P-201ENST00000364102 114 ntBASIC6.55□□□□□ -1.36
RFX1P22670 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.55□□□□□ -1.36
RFX1P22670 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC6.55□□□□□ -1.36
RFX1P22670 RNU2-15P-201ENST00000410692 191 ntBASIC6.55□□□□□ -1.36
RFX1P22670 MTCO3P12-201ENST00000416718 547 ntBASIC6.55□□□□□ -1.36
RFX1P22670 AC130360.1-201ENST00000425489 1117 ntBASIC6.55□□□□□ -1.36
RFX1P22670 OR4F13P-201ENST00000428478 931 ntBASIC6.55□□□□□ -1.36
RFX1P22670 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC6.55□□□□□ -1.36
RFX1P22670 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.55□□□□□ -1.36
RFX1P22670 AL627308.1-201ENST00000435693 821 ntBASIC6.55□□□□□ -1.36
RFX1P22670 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC6.55□□□□□ -1.36
RFX1P22670 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC6.55□□□□□ -1.36
RFX1P22670 AL353662.1-201ENST00000439099 327 ntBASIC6.55□□□□□ -1.36
RFX1P22670 AC021660.1-201ENST00000465006 554 ntBASIC6.55□□□□□ -1.36
RFX1P22670 AC012123.2-201ENST00000485809 248 ntBASIC6.55□□□□□ -1.36
RFX1P22670 AL136038.1-201ENST00000497246 351 ntBASIC6.55□□□□□ -1.36
RFX1P22670 COX7A2P2-201ENST00000505291 250 ntBASIC6.55□□□□□ -1.36
RFX1P22670 HSPD1P15-201ENST00000505573 1122 ntBASIC6.55□□□□□ -1.36
RFX1P22670 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC6.55□□□□□ -1.36
RFX1P22670 RNA5SP340-201ENST00000517132 107 ntBASIC6.55□□□□□ -1.36
RFX1P22670 IGKV3D-25-201ENST00000519599 235 ntBASIC6.55□□□□□ -1.36
RFX1P22670 AC130365.2-201ENST00000525882 1201 ntBASIC6.55□□□□□ -1.36
RFX1P22670 AC022690.1-201ENST00000526681 550 ntBASIC6.55□□□□□ -1.36
RFX1P22670 AC078814.3-201ENST00000553036 491 ntBASIC6.55□□□□□ -1.36
RFX1P22670 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC6.55□□□□□ -1.36
RFX1P22670 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC6.55□□□□□ -1.36
RFX1P22670 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC6.55□□□□□ -1.36
RFX1P22670 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC6.55□□□□□ -1.36
RFX1P22670 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC6.55□□□□□ -1.36
RFX1P22670 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC6.55□□□□□ -1.36
RFX1P22670 SDR42E1P1-201ENST00000611327 477 ntBASIC6.55□□□□□ -1.36
RFX1P22670 MIR6798-201ENST00000612887 67 ntBASIC6.55□□□□□ -1.36
RFX1P22670 AL512624.1-201ENST00000613638 469 ntBASIC6.55□□□□□ -1.36
RFX1P22670 AC130324.3-201ENST00000614165 542 ntBASIC6.55□□□□□ -1.36
RFX1P22670 AL049794.2-201ENST00000616301 365 ntBASIC6.55□□□□□ -1.36
RFX1P22670 AL355974.3-201ENST00000617383 467 ntBASIC6.55□□□□□ -1.36
RFX1P22670 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RFX1P22670 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
RFX1P22670 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RFX1P22670 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.55□□□□□ -1.36
RFX1P22670 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
RFX1P22670 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RFX1P22670 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.55□□□□□ -1.36
RFX1P22670 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RFX1P22670 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.54□□□□□ -1.36
RFX1P22670 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RFX1P22670 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RFX1P22670 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RFX1P22670 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC6.54□□□□□ -1.36
RFX1P22670 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
RFX1P22670 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
RFX1P22670 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RFX1P22670 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
RFX1P22670 AC005294.1-201ENST00000355509 281 ntBASIC6.54□□□□□ -1.36
RFX1P22670 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
RFX1P22670 RN7SKP29-201ENST00000410957 272 ntBASIC6.54□□□□□ -1.36
RFX1P22670 TRAPPC2P10-201ENST00000415662 323 ntBASIC6.54□□□□□ -1.36
RFX1P22670 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.54□□□□□ -1.36
RFX1P22670 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.54□□□□□ -1.36
RFX1P22670 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.54□□□□□ -1.36
RFX1P22670 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms