Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 AL365503.1-201ENST00000605247 905 ntBASIC3.24□□□□□ -1.89
HMGA1P17096 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.24□□□□□ -1.89
HMGA1P17096 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.24□□□□□ -1.89
HMGA1P17096 AC006386.2-201ENST00000624491 75 ntBASIC3.24□□□□□ -1.89
HMGA1P17096 AC012005.1-201ENST00000624575 75 ntBASIC3.24□□□□□ -1.89
HMGA1P17096 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HMGA1P17096 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.24□□□□□ -1.89
HMGA1P17096 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
HMGA1P17096 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC3.24□□□□□ -1.89
HMGA1P17096 RIOK3P1-201ENST00000418778 1528 ntBASIC3.24□□□□□ -1.89
HMGA1P17096 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.24□□□□□ -1.89
HMGA1P17096 AC018529.3-201ENST00000624212 2254 ntBASIC3.23□□□□□ -1.89
HMGA1P17096 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HMGA1P17096 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HMGA1P17096 SNORA71.1-201ENST00000364523 117 ntBASIC3.23□□□□□ -1.89
HMGA1P17096 SKINT1L-201ENST00000401057 817 ntBASIC3.23□□□□□ -1.89
HMGA1P17096 SNORA11C-201ENST00000408532 129 ntBASIC3.23□□□□□ -1.89
HMGA1P17096 RN7SKP285-201ENST00000410137 318 ntBASIC3.23□□□□□ -1.89
HMGA1P17096 RPS26P40-201ENST00000435209 294 ntBASIC3.23□□□□□ -1.89
HMGA1P17096 AL831737.1-201ENST00000441288 271 ntBASIC3.23□□□□□ -1.89
HMGA1P17096 RPL7P48-201ENST00000461513 746 ntBASIC3.23□□□□□ -1.89
HMGA1P17096 AC010401.1-201ENST00000463867 348 ntBASIC3.23□□□□□ -1.89
HMGA1P17096 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.23□□□□□ -1.89
HMGA1P17096 AC097462.2-201ENST00000504623 481 ntBASIC3.23□□□□□ -1.89
HMGA1P17096 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
HMGA1P17096 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.23□□□□□ -1.89
HMGA1P17096 AC119751.5-201ENST00000514077 770 ntBASIC3.23□□□□□ -1.89
HMGA1P17096 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HMGA1P17096 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.23□□□□□ -1.89
HMGA1P17096 AC011492.1-201ENST00000600023 315 ntBASIC3.23□□□□□ -1.89
HMGA1P17096 BNIP3P11-201ENST00000603878 563 ntBASIC3.23□□□□□ -1.89
HMGA1P17096 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.23□□□□□ -1.89
HMGA1P17096 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
HMGA1P17096 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HMGA1P17096 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.22□□□□□ -1.89
HMGA1P17096 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
HMGA1P17096 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HMGA1P17096 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.22□□□□□ -1.89
HMGA1P17096 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
HMGA1P17096 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
HMGA1P17096 COTL1P1-201ENST00000422309 375 ntBASIC3.22□□□□□ -1.89
HMGA1P17096 BX679664.1-201ENST00000434429 253 ntBASIC3.22□□□□□ -1.89
HMGA1P17096 SNORA59A-201ENST00000459326 152 ntBASIC3.22□□□□□ -1.89
HMGA1P17096 AC096576.1-201ENST00000489014 359 ntBASIC3.22□□□□□ -1.89
HMGA1P17096 AC112184.1-201ENST00000505179 312 ntBASIC3.22□□□□□ -1.89
HMGA1P17096 AC010374.2-201ENST00000512933 535 ntBASIC3.22□□□□□ -1.89
HMGA1P17096 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.22□□□□□ -1.89
HMGA1P17096 AP000889.1-201ENST00000530968 660 ntBASIC3.22□□□□□ -1.89
HMGA1P17096 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HMGA1P17096 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC3.22□□□□□ -1.89
HMGA1P17096 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC3.22□□□□□ -1.89
HMGA1P17096 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.22□□□□□ -1.89
HMGA1P17096 AC009948.4-201ENST00000604692 675 ntBASIC3.22□□□□□ -1.89
HMGA1P17096 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.22□□□□□ -1.89
HMGA1P17096 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
HMGA1P17096 PWAR6-201ENST00000552334 4618 ntBASIC3.21□□□□□ -1.89
HMGA1P17096 AC090971.4-201ENST00000560291 1800 ntBASIC3.21□□□□□ -1.89
HMGA1P17096 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HMGA1P17096 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.21□□□□□ -1.9
HMGA1P17096 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.21□□□□□ -1.9
HMGA1P17096 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HMGA1P17096 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HMGA1P17096 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
HMGA1P17096 RNU1-75P-201ENST00000347264 129 ntBASIC3.21□□□□□ -1.9
HMGA1P17096 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
HMGA1P17096 MIR22-201ENST00000362190 85 ntBASIC3.21□□□□□ -1.9
HMGA1P17096 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
HMGA1P17096 U3.26-201ENST00000391236 204 ntBASIC3.21□□□□□ -1.9
HMGA1P17096 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.21□□□□□ -1.9
HMGA1P17096 GLRXP1-201ENST00000423261 334 ntBASIC3.21□□□□□ -1.9
HMGA1P17096 AC011242.1-201ENST00000433596 1158 ntBASIC3.21□□□□□ -1.9
HMGA1P17096 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.21□□□□□ -1.9
HMGA1P17096 AC107083.1-201ENST00000439643 279 ntBASIC3.21□□□□□ -1.9
HMGA1P17096 AC006539.3-201ENST00000454258 129 ntBASIC3.21□□□□□ -1.9
HMGA1P17096 HMGN1P18-201ENST00000457642 277 ntBASIC3.21□□□□□ -1.9
HMGA1P17096 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.21□□□□□ -1.9
HMGA1P17096 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.21□□□□□ -1.9
HMGA1P17096 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.21□□□□□ -1.9
HMGA1P17096 FABP5P12-201ENST00000515543 389 ntBASIC3.21□□□□□ -1.9
HMGA1P17096 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.21□□□□□ -1.9
HMGA1P17096 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.21□□□□□ -1.9
HMGA1P17096 H3F3AP1-201ENST00000559984 334 ntBASIC3.21□□□□□ -1.9
HMGA1P17096 AL592295.2-201ENST00000612578 206 ntBASIC3.21□□□□□ -1.9
HMGA1P17096 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HMGA1P17096 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
HMGA1P17096 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HMGA1P17096 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HMGA1P17096 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HMGA1P17096 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HMGA1P17096 AC073325.2-201ENST00000339545 159 ntBASIC3.2□□□□□ -1.9
HMGA1P17096 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
HMGA1P17096 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
HMGA1P17096 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.2□□□□□ -1.9
HMGA1P17096 AC110754.1-201ENST00000399740 601 ntBASIC3.2□□□□□ -1.9
HMGA1P17096 RPL7P25-201ENST00000404151 721 ntBASIC3.2□□□□□ -1.9
HMGA1P17096 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.2□□□□□ -1.9
HMGA1P17096 ISCA1P2-201ENST00000438679 421 ntBASIC3.2□□□□□ -1.9
HMGA1P17096 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.2□□□□□ -1.9
HMGA1P17096 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.2□□□□□ -1.9
HMGA1P17096 AC098799.1-201ENST00000504752 800 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 125.6 ms