Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 SNORA70.14-201ENST00000516205 110 ntBASIC3.04□□□□□ -1.92
CTLA4P16410 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.04□□□□□ -1.92
CTLA4P16410 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.04□□□□□ -1.92
CTLA4P16410 AC103843.2-201ENST00000530523 682 ntBASIC3.04□□□□□ -1.92
CTLA4P16410 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.04□□□□□ -1.92
CTLA4P16410 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.04□□□□□ -1.92
CTLA4P16410 AL109741.3-201ENST00000561748 592 ntBASIC3.04□□□□□ -1.92
CTLA4P16410 BNIP3P5-201ENST00000562290 498 ntBASIC3.04□□□□□ -1.92
CTLA4P16410 AP004372.1-201ENST00000604842 844 ntBASIC3.04□□□□□ -1.92
CTLA4P16410 MIR7851-201ENST00000610611 160 ntBASIC3.04□□□□□ -1.92
CTLA4P16410 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.04□□□□□ -1.92
CTLA4P16410 AC026951.1-201ENST00000559530 2459 ntBASIC3.04□□□□□ -1.92
CTLA4P16410 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CTLA4P16410 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CTLA4P16410 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.04□□□□□ -1.92
CTLA4P16410 PRO1804-201ENST00000623780 2050 ntBASIC3.04□□□□□ -1.92
CTLA4P16410 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
CTLA4P16410 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
CTLA4P16410 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.03□□□□□ -1.92
CTLA4P16410 AL365440.1-201ENST00000436135 2167 ntBASIC3.03□□□□□ -1.92
CTLA4P16410 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CTLA4P16410 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CTLA4P16410 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CTLA4P16410 RAB9AP3-201ENST00000412737 573 ntBASIC3.03□□□□□ -1.92
CTLA4P16410 AC126124.2-201ENST00000413542 321 ntBASIC3.03□□□□□ -1.92
CTLA4P16410 SYF2P2-201ENST00000417620 583 ntBASIC3.03□□□□□ -1.92
CTLA4P16410 NDUFA5P10-201ENST00000432147 357 ntBASIC3.03□□□□□ -1.92
CTLA4P16410 AL138799.3-201ENST00000438968 350 ntBASIC3.03□□□□□ -1.92
CTLA4P16410 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.03□□□□□ -1.92
CTLA4P16410 RAD1P2-201ENST00000446414 663 ntBASIC3.03□□□□□ -1.92
CTLA4P16410 AC008264.1-201ENST00000447612 367 ntBASIC3.03□□□□□ -1.92
CTLA4P16410 RAB9AP1-201ENST00000449393 573 ntBASIC3.03□□□□□ -1.92
CTLA4P16410 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.03□□□□□ -1.92
CTLA4P16410 HMGB3P30-201ENST00000457863 606 ntBASIC3.03□□□□□ -1.92
CTLA4P16410 RPL7P48-201ENST00000461513 746 ntBASIC3.03□□□□□ -1.92
CTLA4P16410 RPL5P23-201ENST00000496040 868 ntBASIC3.03□□□□□ -1.92
CTLA4P16410 RPL7P47-201ENST00000497299 556 ntBASIC3.03□□□□□ -1.92
CTLA4P16410 PANCR-201ENST00000503456 493 ntTSL 5 BASIC3.03□□□□□ -1.92
CTLA4P16410 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.03□□□□□ -1.92
CTLA4P16410 AC108120.2-201ENST00000512973 294 ntBASIC3.03□□□□□ -1.92
CTLA4P16410 SNORA70.17-201ENST00000516449 133 ntBASIC3.03□□□□□ -1.92
CTLA4P16410 RNU6-1004P-201ENST00000516584 111 ntBASIC3.03□□□□□ -1.92
CTLA4P16410 RNU1-45P-201ENST00000517191 141 ntBASIC3.03□□□□□ -1.92
CTLA4P16410 AP001636.2-201ENST00000525517 696 ntBASIC3.03□□□□□ -1.92
CTLA4P16410 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC3.03□□□□□ -1.92
CTLA4P16410 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.03□□□□□ -1.92
CTLA4P16410 AC009268.1-201ENST00000561352 1203 ntBASIC3.03□□□□□ -1.92
CTLA4P16410 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.03□□□□□ -1.92
CTLA4P16410 AC093227.2-201ENST00000589357 285 ntBASIC3.03□□□□□ -1.92
CTLA4P16410 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.03□□□□□ -1.92
CTLA4P16410 AC007687.1-201ENST00000602704 304 ntBASIC3.03□□□□□ -1.92
CTLA4P16410 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC3.03□□□□□ -1.92
CTLA4P16410 LLPHP1-201ENST00000603571 367 ntBASIC3.03□□□□□ -1.92
CTLA4P16410 RNA5SP108-201ENST00000605921 117 ntBASIC3.03□□□□□ -1.92
CTLA4P16410 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.03□□□□□ -1.92
CTLA4P16410 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.03□□□□□ -1.92
CTLA4P16410 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CTLA4P16410 TNPO1P3-201ENST00000436471 2662 ntBASIC3.03□□□□□ -1.92
CTLA4P16410 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.93
CTLA4P16410 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.03□□□□□ -1.93
CTLA4P16410 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
CTLA4P16410 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
CTLA4P16410 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
CTLA4P16410 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
CTLA4P16410 RNA5SP197-201ENST00000363357 119 ntBASIC3.02□□□□□ -1.93
CTLA4P16410 RNA5SP167-201ENST00000365461 116 ntBASIC3.02□□□□□ -1.93
CTLA4P16410 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.02□□□□□ -1.93
CTLA4P16410 RNU6-317P-201ENST00000384031 107 ntBASIC3.02□□□□□ -1.93
CTLA4P16410 AL356968.1-201ENST00000416622 474 ntBASIC3.02□□□□□ -1.93
CTLA4P16410 RPL36AP36-201ENST00000418616 301 ntBASIC3.02□□□□□ -1.93
CTLA4P16410 ELOCP11-201ENST00000436690 332 ntBASIC3.02□□□□□ -1.93
CTLA4P16410 ELOCP3-201ENST00000439303 348 ntBASIC3.02□□□□□ -1.93
CTLA4P16410 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.02□□□□□ -1.93
CTLA4P16410 ELOCP16-201ENST00000444494 332 ntBASIC3.02□□□□□ -1.93
CTLA4P16410 RPS15AP29-201ENST00000445539 400 ntBASIC3.02□□□□□ -1.93
CTLA4P16410 HMGN2P21-201ENST00000447764 270 ntBASIC3.02□□□□□ -1.93
CTLA4P16410 MORF4L1P4-201ENST00000450245 976 ntBASIC3.02□□□□□ -1.93
CTLA4P16410 CEACAMP4-201ENST00000457676 421 ntBASIC3.02□□□□□ -1.93
CTLA4P16410 TRBV8-2-201ENST00000475637 270 ntBASIC3.02□□□□□ -1.93
CTLA4P16410 AC025518.1-201ENST00000479856 347 ntBASIC3.02□□□□□ -1.93
CTLA4P16410 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.02□□□□□ -1.93
CTLA4P16410 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.02□□□□□ -1.93
CTLA4P16410 USP9YP5-201ENST00000511770 630 ntBASIC3.02□□□□□ -1.93
CTLA4P16410 MTCO1P30-201ENST00000515244 580 ntBASIC3.02□□□□□ -1.93
CTLA4P16410 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.02□□□□□ -1.93
CTLA4P16410 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CTLA4P16410 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC3.02□□□□□ -1.93
CTLA4P16410 PTP4A1P6-201ENST00000531034 478 ntBASIC3.02□□□□□ -1.93
CTLA4P16410 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.02□□□□□ -1.93
CTLA4P16410 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.02□□□□□ -1.93
CTLA4P16410 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.02□□□□□ -1.93
CTLA4P16410 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC3.02□□□□□ -1.93
CTLA4P16410 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CTLA4P16410 AC012531.5-201ENST00000611375 151 ntBASIC3.02□□□□□ -1.93
CTLA4P16410 AC008121.2-201ENST00000614647 523 ntBASIC3.02□□□□□ -1.93
CTLA4P16410 AC006065.5-201ENST00000623427 349 ntBASIC3.02□□□□□ -1.93
CTLA4P16410 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CTLA4P16410 AC009093.8-201ENST00000641769 292 ntBASIC3.02□□□□□ -1.93
CTLA4P16410 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CTLA4P16410 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms