Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 AC021146.3-201ENST00000511911 260 ntBASIC3.96□□□□□ -1.78
HLA-DOBP13765 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC3.96□□□□□ -1.78
HLA-DOBP13765 RNA5SP497-201ENST00000516081 97 ntBASIC3.96□□□□□ -1.78
HLA-DOBP13765 RN7SKP96-201ENST00000516948 297 ntBASIC3.96□□□□□ -1.78
HLA-DOBP13765 AP000827.1-201ENST00000527814 258 ntBASIC3.96□□□□□ -1.78
HLA-DOBP13765 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.96□□□□□ -1.78
HLA-DOBP13765 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.96□□□□□ -1.78
HLA-DOBP13765 AC137768.1-201ENST00000549998 553 ntBASIC3.96□□□□□ -1.78
HLA-DOBP13765 AC063949.1-201ENST00000552900 865 ntBASIC3.96□□□□□ -1.78
HLA-DOBP13765 TRAV15-201ENST00000556680 249 ntBASIC3.96□□□□□ -1.78
HLA-DOBP13765 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.96□□□□□ -1.78
HLA-DOBP13765 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC3.96□□□□□ -1.78
HLA-DOBP13765 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC3.96□□□□□ -1.78
HLA-DOBP13765 AC135507.1-201ENST00000607214 561 ntBASIC3.96□□□□□ -1.78
HLA-DOBP13765 AC245297.2-201ENST00000610119 565 ntBASIC3.96□□□□□ -1.78
HLA-DOBP13765 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HLA-DOBP13765 AC122108.2-201ENST00000611946 526 ntBASIC3.96□□□□□ -1.78
HLA-DOBP13765 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HLA-DOBP13765 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.96□□□□□ -1.78
HLA-DOBP13765 AL596275.2-204ENST00000641628 552 ntBASIC3.96□□□□□ -1.78
HLA-DOBP13765 AL596275.2-206ENST00000641957 626 ntBASIC3.96□□□□□ -1.78
HLA-DOBP13765 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.96□□□□□ -1.78
HLA-DOBP13765 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
HLA-DOBP13765 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HLA-DOBP13765 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HLA-DOBP13765 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
HLA-DOBP13765 AP000756.2-201ENST00000624168 2567 ntBASIC3.96□□□□□ -1.78
HLA-DOBP13765 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HLA-DOBP13765 AL592148.3-201ENST00000608771 2646 ntBASIC3.95□□□□□ -1.78
HLA-DOBP13765 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HLA-DOBP13765 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
HLA-DOBP13765 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
HLA-DOBP13765 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HLA-DOBP13765 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.95□□□□□ -1.78
HLA-DOBP13765 MAPK10-349ENST00000641767 3661 ntBASIC3.95□□□□□ -1.78
HLA-DOBP13765 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HLA-DOBP13765 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.95□□□□□ -1.78
HLA-DOBP13765 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.95□□□□□ -1.78
HLA-DOBP13765 AL390862.1-201ENST00000635467 1469 ntBASIC3.95□□□□□ -1.78
HLA-DOBP13765 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HLA-DOBP13765 Y_RNA.77-201ENST00000362962 107 ntBASIC3.95□□□□□ -1.78
HLA-DOBP13765 RNU4-44P-201ENST00000363050 141 ntBASIC3.95□□□□□ -1.78
HLA-DOBP13765 SNORA4.1-201ENST00000364263 144 ntBASIC3.95□□□□□ -1.78
HLA-DOBP13765 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
HLA-DOBP13765 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
HLA-DOBP13765 RNU6-398P-201ENST00000384143 109 ntBASIC3.95□□□□□ -1.78
HLA-DOBP13765 RNU6-253P-201ENST00000384730 105 ntBASIC3.95□□□□□ -1.78
HLA-DOBP13765 RNA5SP372-201ENST00000390836 115 ntBASIC3.95□□□□□ -1.78
HLA-DOBP13765 RNA5SP332-201ENST00000391063 115 ntBASIC3.95□□□□□ -1.78
HLA-DOBP13765 PRRC2CP1-201ENST00000404428 159 ntBASIC3.95□□□□□ -1.78
HLA-DOBP13765 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HLA-DOBP13765 AL078604.1-201ENST00000404609 466 ntBASIC3.95□□□□□ -1.78
HLA-DOBP13765 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HLA-DOBP13765 AC068533.2-201ENST00000411872 306 ntBASIC3.95□□□□□ -1.78
HLA-DOBP13765 AC009237.10-201ENST00000414112 510 ntBASIC3.95□□□□□ -1.78
HLA-DOBP13765 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.95□□□□□ -1.78
HLA-DOBP13765 TIMM9P2-201ENST00000419324 266 ntBASIC3.95□□□□□ -1.78
HLA-DOBP13765 MTCO3P1-205ENST00000422088 832 ntBASIC3.95□□□□□ -1.78
HLA-DOBP13765 RPL23AP1-201ENST00000428990 471 ntBASIC3.95□□□□□ -1.78
HLA-DOBP13765 RPL37P1-201ENST00000432310 284 ntBASIC3.95□□□□□ -1.78
HLA-DOBP13765 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.95□□□□□ -1.78
HLA-DOBP13765 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.95□□□□□ -1.78
HLA-DOBP13765 AL590103.1-201ENST00000434488 307 ntBASIC3.95□□□□□ -1.78
HLA-DOBP13765 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HLA-DOBP13765 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.95□□□□□ -1.78
HLA-DOBP13765 AC073587.1-201ENST00000447093 876 ntBASIC3.95□□□□□ -1.78
HLA-DOBP13765 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.95□□□□□ -1.78
HLA-DOBP13765 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC3.95□□□□□ -1.78
HLA-DOBP13765 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC3.95□□□□□ -1.78
HLA-DOBP13765 MTND4LP3-201ENST00000468320 276 ntBASIC3.95□□□□□ -1.78
HLA-DOBP13765 RAP1BP2-201ENST00000478270 544 ntBASIC3.95□□□□□ -1.78
HLA-DOBP13765 AC012158.1-204ENST00000483430 465 ntBASIC3.95□□□□□ -1.78
HLA-DOBP13765 RPL7P38-201ENST00000488396 739 ntBASIC3.95□□□□□ -1.78
HLA-DOBP13765 AC092045.1-201ENST00000495716 1231 ntBASIC3.95□□□□□ -1.78
HLA-DOBP13765 OR2A20P-203ENST00000498397 1268 ntBASIC3.95□□□□□ -1.78
HLA-DOBP13765 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.95□□□□□ -1.78
HLA-DOBP13765 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.95□□□□□ -1.78
HLA-DOBP13765 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.95□□□□□ -1.78
HLA-DOBP13765 AC111000.3-201ENST00000508057 576 ntBASIC3.95□□□□□ -1.78
HLA-DOBP13765 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC3.95□□□□□ -1.78
HLA-DOBP13765 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC3.95□□□□□ -1.78
HLA-DOBP13765 SNORA48.10-201ENST00000516965 160 ntBASIC3.95□□□□□ -1.78
HLA-DOBP13765 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC3.95□□□□□ -1.78
HLA-DOBP13765 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC3.95□□□□□ -1.78
HLA-DOBP13765 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC3.95□□□□□ -1.78
HLA-DOBP13765 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.95□□□□□ -1.78
HLA-DOBP13765 ARL2BPP5-201ENST00000523141 481 ntBASIC3.95□□□□□ -1.78
HLA-DOBP13765 OR5AK1P-201ENST00000524837 922 ntBASIC3.95□□□□□ -1.78
HLA-DOBP13765 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.95□□□□□ -1.78
HLA-DOBP13765 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC3.95□□□□□ -1.78
HLA-DOBP13765 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.95□□□□□ -1.78
HLA-DOBP13765 AC007954.1-201ENST00000554198 494 ntBASIC3.95□□□□□ -1.78
HLA-DOBP13765 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.95□□□□□ -1.78
HLA-DOBP13765 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.95□□□□□ -1.78
HLA-DOBP13765 MIR3915-201ENST00000578518 97 ntBASIC3.95□□□□□ -1.78
HLA-DOBP13765 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.95□□□□□ -1.78
HLA-DOBP13765 AC008687.2-201ENST00000597865 520 ntBASIC3.95□□□□□ -1.78
HLA-DOBP13765 AL031985.2-201ENST00000600955 480 ntBASIC3.95□□□□□ -1.78
HLA-DOBP13765 AC115286.1-201ENST00000604298 434 ntBASIC3.95□□□□□ -1.78
HLA-DOBP13765 AC018714.1-201ENST00000605028 208 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms